RNA–Protein interactions for RNA: ENST00000504669.5

ITGA1-203, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 6,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-203ENST00000504669 SETSIPP0DME0 302 aa12.79□□□□□ -0.36
ITGA1-203ENST00000504669 ERCC4Q92889 916 aaPredicted RBP12.79□□□□□ -0.36
ITGA1-203ENST00000504669 TRERF1Q96PN7 1200 aa12.79□□□□□ -0.36
ITGA1-203ENST00000504669 PDCL2Q8N4E4 241 aa12.79□□□□□ -0.36
ITGA1-203ENST00000504669 IFT57Q9NWB7 429 aa12.79□□□□□ -0.36
ITGA1-203ENST00000504669 DDX11Q96FC9 970 aa12.78□□□□□ -0.36
ITGA1-203ENST00000504669 CLSTN1O94985 981 aa12.78□□□□□ -0.36
ITGA1-203ENST00000504669 MFAP1P55081 439 aaKnown RBP12.78□□□□□ -0.36
ITGA1-203ENST00000504669 GTPBP4Q9BZE4 634 aaKnown RBP12.77□□□□□ -0.36
ITGA1-203ENST00000504669 SUDS3Q9H7L9 328 aaPredicted RBP12.77□□□□□ -0.37
ITGA1-203ENST00000504669 ARID4AP29374 1257 aaPredicted RBP12.77□□□□□ -0.37
ITGA1-203ENST00000504669 HOMER1Q86YM7 354 aa12.76□□□□□ -0.37
ITGA1-203ENST00000504669 ZNF622Q969S3 477 aaKnown RBP eCLIP12.76□□□□□ -0.37
ITGA1-203ENST00000504669 BCCIPQ9P287 314 aaKnown RBP eCLIP12.76□□□□□ -0.37
ITGA1-203ENST00000504669 CENPHQ9H3R5 247 aa12.76□□□□□ -0.37
ITGA1-203ENST00000504669 GOLIM4O00461 696 aa12.76□□□□□ -0.37
ITGA1-203ENST00000504669 TPD52L1Q16890 204 aaPredicted RBP12.76□□□□□ -0.37
ITGA1-203ENST00000504669 HDAC5Q9UQL6 1122 aa12.76□□□□□ -0.37
ITGA1-203ENST00000504669 P3H3Q8IVL6 736 aa12.75□□□□□ -0.37
ITGA1-203ENST00000504669 TAOK2Q9UL54 1235 aa12.75□□□□□ -0.37
ITGA1-203ENST00000504669 GOLGA6L10A6NI86 522 aa12.74□□□□□ -0.37
ITGA1-203ENST00000504669 LIG1P18858 919 aa12.74□□□□□ -0.37
ITGA1-203ENST00000504669 SMAP1Q8IYB5 467 aaPredicted RBP12.74□□□□□ -0.37
ITGA1-203ENST00000504669 NEXNQ0ZGT2 675 aa12.74□□□□□ -0.37
ITGA1-203ENST00000504669 BANK1Q8NDB2 785 aa12.74□□□□□ -0.37
ITGA1-203ENST00000504669 CPSF2Q9P2I0 782 aaKnown RBP12.74□□□□□ -0.37
ITGA1-203ENST00000504669 GOLGA6L19H0YKK7 550 aa12.74□□□□□ -0.37
ITGA1-203ENST00000504669 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.74□□□□□ -0.37
ITGA1-203ENST00000504669 CCDC91Q7Z6B0 441 aa12.73□□□□□ -0.37
ITGA1-203ENST00000504669 CCDC34Q96HJ3 373 aa12.73□□□□□ -0.37
ITGA1-203ENST00000504669 NF2P35240 595 aa12.73□□□□□ -0.37
ITGA1-203ENST00000504669 CNPY4Q8N129 248 aa12.73□□□□□ -0.37
ITGA1-203ENST00000504669 MS4A1P11836 297 aa12.72□□□□□ -0.37
ITGA1-203ENST00000504669 FAM161AQ3B820 660 aa12.72□□□□□ -0.37
ITGA1-203ENST00000504669 EIF4G2P78344 907 aaKnown RBP eCLIP12.72□□□□□ -0.37
ITGA1-203ENST00000504669 SKIDA1Q1XH10 827 aa12.72□□□□□ -0.37
ITGA1-203ENST00000504669 SASS6Q6UVJ0 657 aa12.72□□□□□ -0.37
ITGA1-203ENST00000504669 TRIM6-TRIM34B2RNG4 842 aa12.72□□□□□ -0.37
ITGA1-203ENST00000504669 TRIM34Q9BYJ4 488 aa12.72□□□□□ -0.37
ITGA1-203ENST00000504669 AAMPQ13685 434 aa12.71□□□□□ -0.38
ITGA1-203ENST00000504669 ENOX2Q16206 610 aaKnown RBP12.71□□□□□ -0.38
ITGA1-203ENST00000504669 PLPPR3Q6T4P5 718 aa12.71□□□□□ -0.38
ITGA1-203ENST00000504669 GOLGA6L7A0A1B0GV03 622 aa12.71□□□□□ -0.38
ITGA1-203ENST00000504669 CTR9Q6PD62 1173 aa12.7□□□□□ -0.38
ITGA1-203ENST00000504669 U2SURPO15042 1029 aaKnown RBP12.7□□□□□ -0.38
ITGA1-203ENST00000504669 PPP4R3BQ5MIZ7 849 aa12.7□□□□□ -0.38
ITGA1-203ENST00000504669 IBSPP21815 317 aaPredicted RBP12.7□□□□□ -0.38
ITGA1-203ENST00000504669 ESPNB1AK53 854 aa12.7□□□□□ -0.38
ITGA1-203ENST00000504669 NAP1L1P55209 391 aaKnown RBP12.69□□□□□ -0.38
ITGA1-203ENST00000504669 CHMP5Q9NZZ3 219 aa12.69□□□□□ -0.38
ITGA1-203ENST00000504669 FOXD4L5Q5VV16 416 aaPredicted RBP12.69□□□□□ -0.38
ITGA1-203ENST00000504669 FOXD4L4Q8WXT5 416 aaPredicted RBP12.69□□□□□ -0.38
ITGA1-203ENST00000504669 NBPF1Q3BBV0 1214 aa12.68□□□□□ -0.38
ITGA1-203ENST00000504669 CCP110O43303 1012 aa12.68□□□□□ -0.38
ITGA1-203ENST00000504669 FAM107BQ9H098 131 aa12.67□□□□□ -0.38
ITGA1-203ENST00000504669 GOLGA6L10A0A0M3HER8 536 aa12.67□□□□□ -0.38
ITGA1-203ENST00000504669 WDR66Q8TBY9 1149 aa12.67□□□□□ -0.38
ITGA1-203ENST00000504669 DNAAF4Q8WXU2 420 aa12.67□□□□□ -0.38
ITGA1-203ENST00000504669 GORABQ5T7V8 394 aa12.66□□□□□ -0.38
ITGA1-203ENST00000504669 DZIP1Q86YF9 867 aaKnown RBP12.66□□□□□ -0.38
ITGA1-203ENST00000504669 GRPEL1Q9HAV7 217 aa12.66□□□□□ -0.38
ITGA1-203ENST00000504669 SLC26A8Q96RN1 970 aa12.66□□□□□ -0.38
ITGA1-203ENST00000504669 KIAA1328Q86T90 577 aa12.66□□□□□ -0.38
ITGA1-203ENST00000504669 EIF3JO75822 258 aaKnown RBP12.66□□□□□ -0.38
ITGA1-203ENST00000504669 NOL10Q9BSC4 688 aaKnown RBP12.66□□□□□ -0.38
ITGA1-203ENST00000504669 STK31Q9BXU1 1019 aa12.66□□□□□ -0.38
ITGA1-203ENST00000504669 PAK3O75914 559 aaPredicted RBP12.65□□□□□ -0.38
ITGA1-203ENST00000504669 RNF20Q5VTR2 975 aa12.65□□□□□ -0.38
ITGA1-203ENST00000504669 ZBTB12Q9Y330 459 aaPredicted RBP12.65□□□□□ -0.38
ITGA1-203ENST00000504669 MYO6Q9UM54 1294 aa12.65□□□□□ -0.38
ITGA1-203ENST00000504669 TTC31Q49AM3 519 aaPredicted RBP12.65□□□□□ -0.38
ITGA1-203ENST00000504669 LRCH2Q5VUJ6 765 aa12.65□□□□□ -0.38
ITGA1-203ENST00000504669 TRAK2O60296 914 aa12.64□□□□□ -0.39
ITGA1-203ENST00000504669 GTF2F1P35269 517 aaKnown RBP eCLIP12.64□□□□□ -0.39
ITGA1-203ENST00000504669 RCAN3Q9UKA8 241 aa12.64□□□□□ -0.39
ITGA1-203ENST00000504669 SRPK2P78362 688 aaKnown RBP12.64□□□□□ -0.39
ITGA1-203ENST00000504669 TOMM22Q9NS69 142 aa12.64□□□□□ -0.39
ITGA1-203ENST00000504669 MNAT1P51948 309 aa12.64□□□□□ -0.39
ITGA1-203ENST00000504669 CLASRPQ8N2M8 674 aaKnown RBP12.64□□□□□ -0.39
ITGA1-203ENST00000504669 PAF1Q8N7H5 531 aa12.64□□□□□ -0.39
ITGA1-203ENST00000504669 PMFBP1Q8TBY8 1022 aa12.64□□□□□ -0.39
ITGA1-203ENST00000504669 BECN2A8MW95 431 aa12.63□□□□□ -0.39
ITGA1-203ENST00000504669 SPDYE4A6NLX3 237 aa12.63□□□□□ -0.39
ITGA1-203ENST00000504669 DYNC1I1O14576 645 aa12.63□□□□□ -0.39
ITGA1-203ENST00000504669 CCDC112Q8NEF3 446 aa12.63□□□□□ -0.39
ITGA1-203ENST00000504669 TXLNBQ8N3L3 684 aa12.62□□□□□ -0.39
ITGA1-203ENST00000504669 MSH5O43196 834 aa12.62□□□□□ -0.39
ITGA1-203ENST00000504669 TPM1P09493 284 aa12.61□□□□□ -0.39
ITGA1-203ENST00000504669 RALBP1Q15311 655 aa12.61□□□□□ -0.39
ITGA1-203ENST00000504669 ST18O60284 1047 aa12.61□□□□□ -0.39
ITGA1-203ENST00000504669 FRAT2O75474 233 aaPredicted RBP12.61□□□□□ -0.39
ITGA1-203ENST00000504669 RWDD1Q9H446 243 aaPredicted RBP12.61□□□□□ -0.39
ITGA1-203ENST00000504669 CT47B1P0C2W7 299 aaPredicted RBP12.61□□□□□ -0.39
ITGA1-203ENST00000504669 CAVIN1Q6NZI2 390 aaKnown RBP12.61□□□□□ -0.39
ITGA1-203ENST00000504669 SHTN1A0MZ66 631 aa12.61□□□□□ -0.39
ITGA1-203ENST00000504669 GBP2P32456 591 aaPredicted RBP12.61□□□□□ -0.39
ITGA1-203ENST00000504669 TSR1Q2NL82 804 aaKnown RBP12.61□□□□□ -0.39
ITGA1-203ENST00000504669 MCTP1Q6DN14 999 aa12.61□□□□□ -0.39
ITGA1-203ENST00000504669 NUDCQ9Y266 331 aa12.61□□□□□ -0.39
ITGA1-203ENST00000504669 NPHP1O15259 732 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms