RNA–Protein interactions for RNA: ENST00000504339.1

LINC02239-201, Transcript of long intergenic non-protein coding RNA 2239, humanhuman

TSL 1 (best) BASIC

Gene LINC02239, Length 2,290 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02239-201ENST00000504339 ZFYVE16Q7Z3T8 1539 aa12.67□□□□□ -0.38
LINC02239-201ENST00000504339 SPAG9O60271 1321 aaKnown RBP12.67□□□□□ -0.38
LINC02239-201ENST00000504339 RTEL1-TNFRSF6BF6WH68 1400 aa12.67□□□□□ -0.38
LINC02239-201ENST00000504339 RALGAPBQ86X10 1494 aa12.66□□□□□ -0.38
LINC02239-201ENST00000504339 CNTLNQ9NXG0 1405 aa12.66□□□□□ -0.38
LINC02239-201ENST00000504339 DCAF11Q8TEB1 546 aa12.66□□□□□ -0.38
LINC02239-201ENST00000504339 USP47Q96K76 1375 aa12.66□□□□□ -0.38
LINC02239-201ENST00000504339 KDM2AQ9Y2K7 1162 aa12.65□□□□□ -0.38
LINC02239-201ENST00000504339 BCORL1Q5H9F3 1711 aa12.65□□□□□ -0.38
LINC02239-201ENST00000504339 KDM5CP41229 1560 aa12.64□□□□□ -0.39
LINC02239-201ENST00000504339 ATP10AO60312 1499 aa12.64□□□□□ -0.39
LINC02239-201ENST00000504339 CCDC144AA2RUR9 1427 aa12.64□□□□□ -0.39
LINC02239-201ENST00000504339 SCAPERQ9BY12 1400 aa12.63□□□□□ -0.39
LINC02239-201ENST00000504339 INO80Q9ULG1 1556 aaPredicted RBP12.62□□□□□ -0.39
LINC02239-201ENST00000504339 CCDC184Q52MB2 194 aa12.62□□□□□ -0.39
LINC02239-201ENST00000504339 ADGRL1O94910 1474 aa12.62□□□□□ -0.39
LINC02239-201ENST00000504339 A2MP01023 1474 aa12.62□□□□□ -0.39
LINC02239-201ENST00000504339 RGL3Q3MIN7 710 aa12.62□□□□□ -0.39
LINC02239-201ENST00000504339 PRAG1Q86YV5 1406 aa12.61□□□□□ -0.39
LINC02239-201ENST00000504339 ATP7AQ04656 1500 aa12.6□□□□□ -0.39
LINC02239-201ENST00000504339 CARD11Q9BXL7 1154 aa12.6□□□□□ -0.39
LINC02239-201ENST00000504339 PRKRIP1Q9H875 184 aaPredicted RBP12.6□□□□□ -0.39
LINC02239-201ENST00000504339 NBPF1Q3BBV0 1214 aa12.59□□□□□ -0.39
LINC02239-201ENST00000504339 DHX29Q7Z478 1369 aaKnown RBP12.59□□□□□ -0.39
LINC02239-201ENST00000504339 POLR1AO95602 1720 aaPredicted RBP12.58□□□□□ -0.39
LINC02239-201ENST00000504339 ST20-MTHFSA0A0A6YYL1 179 aa12.58□□□□□ -0.4
LINC02239-201ENST00000504339 DEPDC5O75140 1603 aa12.58□□□□□ -0.4
LINC02239-201ENST00000504339 VWDEQ8N2E2 1590 aa12.58□□□□□ -0.4
LINC02239-201ENST00000504339 E9PCH4 1651 aa12.57□□□□□ -0.4
LINC02239-201ENST00000504339 NPM1P06748 294 aaKnown RBP eCLIP12.57□□□□□ -0.4
LINC02239-201ENST00000504339 PTPRTO14522 1441 aa12.57□□□□□ -0.4
LINC02239-201ENST00000504339 CD109Q6YHK3 1445 aa12.56□□□□□ -0.4
LINC02239-201ENST00000504339 ROCK2O75116 1388 aaKnown RBP12.56□□□□□ -0.4
LINC02239-201ENST00000504339 GPRASP1Q5JY77 1395 aa12.56□□□□□ -0.4
LINC02239-201ENST00000504339 TRPM1Q7Z4N2 1603 aa12.56□□□□□ -0.4
LINC02239-201ENST00000504339 MROH1Q8NDA8 1641 aa12.56□□□□□ -0.4
LINC02239-201ENST00000504339 KIF3BO15066 747 aa12.55□□□□□ -0.4
LINC02239-201ENST00000504339 KIDINS220Q9ULH0 1771 aa12.55□□□□□ -0.4
LINC02239-201ENST00000504339 ARID4BQ4LE39 1312 aaPredicted RBP12.54□□□□□ -0.4
LINC02239-201ENST00000504339 SUPT16HQ9Y5B9 1047 aaKnown RBP12.53□□□□□ -0.4
LINC02239-201ENST00000504339 TRPM2O94759 1503 aa12.52□□□□□ -0.4
LINC02239-201ENST00000504339 ZNF518AQ6AHZ1 1483 aa12.52□□□□□ -0.4
LINC02239-201ENST00000504339 POGZQ7Z3K3 1410 aa12.52□□□□□ -0.41
LINC02239-201ENST00000504339 PRDM15P57071 1507 aaPredicted RBP12.52□□□□□ -0.41
LINC02239-201ENST00000504339 POLR3GLQ9BT43 218 aa12.51□□□□□ -0.41
LINC02239-201ENST00000504339 CLTCL1P53675 1640 aa12.51□□□□□ -0.41
LINC02239-201ENST00000504339 TET3O43151 1660 aa12.5□□□□□ -0.41
LINC02239-201ENST00000504339 TESK2Q96S53 571 aa12.5□□□□□ -0.41
LINC02239-201ENST00000504339 MYT1LQ9UL68 1186 aa12.5□□□□□ -0.41
LINC02239-201ENST00000504339 EIF2AK4Q9P2K8 1649 aaKnown RBP12.5□□□□□ -0.41
LINC02239-201ENST00000504339 FRMPD1Q5SYB0 1578 aa12.5□□□□□ -0.41
LINC02239-201ENST00000504339 MLH3Q9UHC1 1453 aa12.49□□□□□ -0.41
LINC02239-201ENST00000504339 SPHKAPQ2M3C7 1700 aa12.48□□□□□ -0.41
LINC02239-201ENST00000504339 KANK1Q14678 1352 aa12.48□□□□□ -0.41
LINC02239-201ENST00000504339 RAPGEF3O95398 923 aa12.48□□□□□ -0.41
LINC02239-201ENST00000504339 CYB5RLQ6IPT4 315 aa12.48□□□□□ -0.41
LINC02239-201ENST00000504339 UGGT1Q9NYU2 1555 aa12.47□□□□□ -0.41
LINC02239-201ENST00000504339 LAMC1P11047 1609 aa12.47□□□□□ -0.41
LINC02239-201ENST00000504339 HNRNPUQ00839 825 aaKnown RBP eCLIP12.47□□□□□ -0.41
LINC02239-201ENST00000504339 MRS2Q9HD23 443 aa12.47□□□□□ -0.41
LINC02239-201ENST00000504339 MADDQ8WXG6 1647 aa12.46□□□□□ -0.42
LINC02239-201ENST00000504339 DISP3Q9P2K9 1392 aa12.46□□□□□ -0.42
LINC02239-201ENST00000504339 EFCAB6Q5THR3 1501 aa12.45□□□□□ -0.42
LINC02239-201ENST00000504339 LMTK2Q8IWU2 1503 aa12.45□□□□□ -0.42
LINC02239-201ENST00000504339 RNF17Q9BXT8 1623 aaKnown RBP12.45□□□□□ -0.42
LINC02239-201ENST00000504339 PPRC1Q5VV67 1664 aaKnown RBP12.45□□□□□ -0.42
LINC02239-201ENST00000504339 CEP152O94986 1710 aa12.45□□□□□ -0.42
LINC02239-201ENST00000504339 CNGB1Q14028 1251 aaPredicted RBP12.45□□□□□ -0.42
LINC02239-201ENST00000504339 NEO1Q92859 1461 aa12.45□□□□□ -0.42
LINC02239-201ENST00000504339 CFAP74Q9C0B2 1584 aa12.44□□□□□ -0.42
LINC02239-201ENST00000504339 MYT1Q01538 1121 aa12.44□□□□□ -0.42
LINC02239-201ENST00000504339 FAM9BQ8IZU0 186 aa12.44□□□□□ -0.42
LINC02239-201ENST00000504339 COL17A1Q9UMD9 1497 aaPredicted RBP12.44□□□□□ -0.42
LINC02239-201ENST00000504339 ABCA6Q8N139 1617 aa12.44□□□□□ -0.42
LINC02239-201ENST00000504339 HECW2Q9P2P5 1572 aa12.43□□□□□ -0.42
LINC02239-201ENST00000504339 PER1O15534 1290 aaPredicted RBP12.43□□□□□ -0.42
LINC02239-201ENST00000504339 NPATQ14207 1427 aa12.42□□□□□ -0.42
LINC02239-201ENST00000504339 NEURL4Q96JN8 1562 aa12.42□□□□□ -0.42
LINC02239-201ENST00000504339 MAP3K4Q9Y6R4 1608 aa12.41□□□□□ -0.42
LINC02239-201ENST00000504339 GGT6Q6P531 493 aa12.41□□□□□ -0.42
LINC02239-201ENST00000504339 RIMBP3CA6NJZ7 1639 aa12.4□□□□□ -0.42
LINC02239-201ENST00000504339 RIMBP3BA6NNM3 1639 aa12.4□□□□□ -0.42
LINC02239-201ENST00000504339 RIMBP3Q9UFD9 1639 aa12.4□□□□□ -0.42
LINC02239-201ENST00000504339 ADGRF5Q8IZF2 1346 aa12.4□□□□□ -0.42
LINC02239-201ENST00000504339 STAC3Q96MF2 364 aa12.4□□□□□ -0.42
LINC02239-201ENST00000504339 FKBP8Q14318 412 aa12.39□□□□□ -0.43
LINC02239-201ENST00000504339 PNISRQ8TF01 805 aaKnown RBP12.39□□□□□ -0.43
LINC02239-201ENST00000504339 YEATS2Q9ULM3 1422 aa12.39□□□□□ -0.43
LINC02239-201ENST00000504339 DIP2CQ9Y2E4 1556 aa12.38□□□□□ -0.43
LINC02239-201ENST00000504339 IQGAP1P46940 1657 aa12.38□□□□□ -0.43
LINC02239-201ENST00000504339 ABCC3O15438 1527 aa12.38□□□□□ -0.43
LINC02239-201ENST00000504339 RICTORQ6R327 1708 aa12.38□□□□□ -0.43
LINC02239-201ENST00000504339 GLI2P10070 1586 aa12.38□□□□□ -0.43
LINC02239-201ENST00000504339 CFAP70Q5T0N1 1121 aa12.37□□□□□ -0.43
LINC02239-201ENST00000504339 MYOM2P54296 1465 aa12.37□□□□□ -0.43
LINC02239-201ENST00000504339 MROH2AA6NES4 1674 aa12.37□□□□□ -0.43
LINC02239-201ENST00000504339 SCAF11Q99590 1463 aaKnown RBP12.36□□□□□ -0.43
LINC02239-201ENST00000504339 NRXN1Q9ULB1 1477 aa12.36□□□□□ -0.43
LINC02239-201ENST00000504339 ZBED9Q6R2W3 1325 aa12.36□□□□□ -0.43
LINC02239-201ENST00000504339 PARD3Q8TEW0 1356 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms