RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 RBM33Q96EV2 1170 aaKnown RBP10.75□□□□□ -0.69
TRAPPC13-205ENST00000504243 LMOD2Q6P5Q4 547 aa10.74□□□□□ -0.69
TRAPPC13-205ENST00000504243 C6orf132Q5T0Z8 1188 aa10.73□□□□□ -0.69
TRAPPC13-205ENST00000504243 CDAN1Q8IWY9 1227 aa10.73□□□□□ -0.69
TRAPPC13-205ENST00000504243 PCDH10Q9P2E7 1040 aa10.73□□□□□ -0.69
TRAPPC13-205ENST00000504243 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.71□□□□□ -0.69
TRAPPC13-205ENST00000504243 KCNK17Q96T54 332 aa10.71□□□□□ -0.69
TRAPPC13-205ENST00000504243 PRIM1P49642 420 aaKnown RBP10.7□□□□□ -0.7
TRAPPC13-205ENST00000504243 POTEEQ6S8J3 1075 aa10.7□□□□□ -0.7
TRAPPC13-205ENST00000504243 CERKQ8TCT0 537 aa10.7□□□□□ -0.7
TRAPPC13-205ENST00000504243 RBM26Q5T8P6 1007 aaKnown RBP10.69□□□□□ -0.7
TRAPPC13-205ENST00000504243 AXIN2Q9Y2T1 843 aa10.69□□□□□ -0.7
TRAPPC13-205ENST00000504243 PPP1R3GB7ZBB8 358 aa10.68□□□□□ -0.7
TRAPPC13-205ENST00000504243 PSEN2P49810 448 aa10.68□□□□□ -0.7
TRAPPC13-205ENST00000504243 TSR1Q2NL82 804 aaKnown RBP10.68□□□□□ -0.7
TRAPPC13-205ENST00000504243 NUTM2FA1L443 756 aa10.67□□□□□ -0.7
TRAPPC13-205ENST00000504243 LSM11P83369 360 aaKnown RBP eCLIP10.64□□□□□ -0.71
TRAPPC13-205ENST00000504243 GPIHBP1Q8IV16 184 aa10.64□□□□□ -0.71
TRAPPC13-205ENST00000504243 SLC4A5Q9BY07 1137 aa10.64□□□□□ -0.71
TRAPPC13-205ENST00000504243 KRTAP3-3Q9BYR6 98 aa10.64□□□□□ -0.71
TRAPPC13-205ENST00000504243 KRTAP3-2Q9BYR7 98 aa10.64□□□□□ -0.71
TRAPPC13-205ENST00000504243 CDHR5Q9HBB8 845 aa10.64□□□□□ -0.71
TRAPPC13-205ENST00000504243 FCHSD2O94868 740 aa10.63□□□□□ -0.71
TRAPPC13-205ENST00000504243 COL9A1P20849 921 aa10.63□□□□□ -0.71
TRAPPC13-205ENST00000504243 DMRTA1Q5VZB9 504 aa10.63□□□□□ -0.71
TRAPPC13-205ENST00000504243 TK2O00142 265 aa10.62□□□□□ -0.71
TRAPPC13-205ENST00000504243 PTGDRQ13258 359 aa10.62□□□□□ -0.71
TRAPPC13-205ENST00000504243 ZBED2Q9BTP6 218 aa10.62□□□□□ -0.71
TRAPPC13-205ENST00000504243 ONECUT3O60422 494 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC13-205ENST00000504243 ANKRD13DQ6ZTN6 518 aa10.61□□□□□ -0.71
TRAPPC13-205ENST00000504243 NPDC1Q9NQX5 325 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC13-205ENST00000504243 RBM27Q9P2N5 1060 aaKnown RBP10.6□□□□□ -0.71
TRAPPC13-205ENST00000504243 PRSS12P56730 875 aa10.59□□□□□ -0.71
TRAPPC13-205ENST00000504243 HIC1Q14526 733 aa10.59□□□□□ -0.71
TRAPPC13-205ENST00000504243 ADGRD1Q6QNK2 874 aa10.58□□□□□ -0.72
TRAPPC13-205ENST00000504243 CDCA7LQ96GN5 454 aa10.58□□□□□ -0.72
TRAPPC13-205ENST00000504243 VPS9D1Q9Y2B5 631 aa10.58□□□□□ -0.72
TRAPPC13-205ENST00000504243 TRIM6-TRIM34B2RNG4 842 aa10.57□□□□□ -0.72
TRAPPC13-205ENST00000504243 ZC3H15Q8WU90 426 aaKnown RBP10.57□□□□□ -0.72
TRAPPC13-205ENST00000504243 GNPATO15228 680 aa10.55□□□□□ -0.72
TRAPPC13-205ENST00000504243 GPR37O15354 613 aa10.55□□□□□ -0.72
TRAPPC13-205ENST00000504243 PROX2Q3B8N5 592 aa10.55□□□□□ -0.72
TRAPPC13-205ENST00000504243 PACS2Q86VP3 889 aa10.55□□□□□ -0.72
TRAPPC13-205ENST00000504243 RABGEF1Q9UJ41 708 aa10.55□□□□□ -0.72
TRAPPC13-205ENST00000504243 STAC3Q96MF2 364 aa10.53□□□□□ -0.72
TRAPPC13-205ENST00000504243 PADI6Q6TGC4 694 aa10.52□□□□□ -0.73
TRAPPC13-205ENST00000504243 TTC13Q8NBP0 860 aa10.52□□□□□ -0.73
TRAPPC13-205ENST00000504243 NBPF3Q9H094 633 aa10.52□□□□□ -0.73
TRAPPC13-205ENST00000504243 KIAA1468Q9P260 1216 aa10.52□□□□□ -0.73
TRAPPC13-205ENST00000504243 TSKSQ9UJT2 592 aa10.52□□□□□ -0.73
TRAPPC13-205ENST00000504243 HRO43593 1189 aa10.51□□□□□ -0.73
TRAPPC13-205ENST00000504243 NBPF26B4DH59 902 aa10.5□□□□□ -0.73
TRAPPC13-205ENST00000504243 BHMG1C9JSJ3 638 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC13-205ENST00000504243 LAPTM4BQ86VI4 370 aa10.48□□□□□ -0.73
TRAPPC13-205ENST00000504243 FAM198AQ9UFP1 575 aa10.48□□□□□ -0.73
TRAPPC13-205ENST00000504243 ZMYND10O75800 440 aa10.47□□□□□ -0.73
TRAPPC13-205ENST00000504243 MRPL50Q8N5N7 158 aaKnown RBP10.47□□□□□ -0.73
TRAPPC13-205ENST00000504243 TATDN2Q93075 761 aa10.47□□□□□ -0.73
TRAPPC13-205ENST00000504243 SLC24A3Q9HC58 644 aa10.47□□□□□ -0.73
TRAPPC13-205ENST00000504243 PNMA3Q9UL41 463 aa10.47□□□□□ -0.73
TRAPPC13-205ENST00000504243 FECHP22830 423 aa10.46□□□□□ -0.73
TRAPPC13-205ENST00000504243 BARGINQ6ZT62 677 aa10.46□□□□□ -0.73
TRAPPC13-205ENST00000504243 MINK1Q8N4C8 1332 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC13-205ENST00000504243 OATP04181 439 aa10.45□□□□□ -0.74
TRAPPC13-205ENST00000504243 MAP2K5Q13163 448 aa10.45□□□□□ -0.74
TRAPPC13-205ENST00000504243 NUDT18Q6ZVK8 323 aa10.45□□□□□ -0.74
TRAPPC13-205ENST00000504243 KRI1Q8N9T8 703 aaKnown RBP10.45□□□□□ -0.74
TRAPPC13-205ENST00000504243 RBM46Q8TBY0 533 aaKnown RBP10.45□□□□□ -0.74
TRAPPC13-205ENST00000504243 SPNS2Q8IVW8 549 aa10.44□□□□□ -0.74
TRAPPC13-205ENST00000504243 GOLGA8CPA6NN73 597 aa10.43□□□□□ -0.74
TRAPPC13-205ENST00000504243 FAM98CQ17RN3 349 aaKnown RBP10.43□□□□□ -0.74
TRAPPC13-205ENST00000504243 ADGRG1Q9Y653 693 aa10.43□□□□□ -0.74
TRAPPC13-205ENST00000504243 SEPT9Q9UHD8 586 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC13-205ENST00000504243 IRF6O14896 467 aa10.41□□□□□ -0.74
TRAPPC13-205ENST00000504243 EYA1Q99502 592 aa10.41□□□□□ -0.74
TRAPPC13-205ENST00000504243 MYT1LQ9UL68 1186 aa10.41□□□□□ -0.74
TRAPPC13-205ENST00000504243 SMAPO00193 183 aa10.4□□□□□ -0.74
TRAPPC13-205ENST00000504243 HDGFP51858 240 aaKnown RBP10.39□□□□□ -0.75
TRAPPC13-205ENST00000504243 NEUROD2Q15784 382 aa10.39□□□□□ -0.75
TRAPPC13-205ENST00000504243 C3orf80F5H4A9 247 aa10.38□□□□□ -0.75
TRAPPC13-205ENST00000504243 FAM161AQ3B820 660 aa10.38□□□□□ -0.75
TRAPPC13-205ENST00000504243 METTL3Q86U44 580 aaKnown RBP10.38□□□□□ -0.75
TRAPPC13-205ENST00000504243 PXYLP1Q8TE99 480 aa10.38□□□□□ -0.75
TRAPPC13-205ENST00000504243 ZFRQ96KR1 1074 aaKnown RBP10.38□□□□□ -0.75
TRAPPC13-205ENST00000504243 ANKK1Q8NFD2 765 aa10.37□□□□□ -0.75
TRAPPC13-205ENST00000504243 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.36□□□□□ -0.75
TRAPPC13-205ENST00000504243 DNAJB2P25686 324 aa10.36□□□□□ -0.75
TRAPPC13-205ENST00000504243 CCDC102AQ96A19 550 aa10.36□□□□□ -0.75
TRAPPC13-205ENST00000504243 BRPF1P55201 1214 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC13-205ENST00000504243 WNT2BQ93097 391 aa10.35□□□□□ -0.75
TRAPPC13-205ENST00000504243 AK7Q96M32 723 aa10.35□□□□□ -0.75
TRAPPC13-205ENST00000504243 RCCD1A6NED2 376 aa10.34□□□□□ -0.75
TRAPPC13-205ENST00000504243 RNF166Q96A37 237 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC13-205ENST00000504243 SLC4A3P48751 1232 aa10.33□□□□□ -0.76
TRAPPC13-205ENST00000504243 MMRN1Q13201 1228 aa10.33□□□□□ -0.76
TRAPPC13-205ENST00000504243 TMEM132AQ24JP5 1023 aa10.32□□□□□ -0.76
TRAPPC13-205ENST00000504243 KCTD12Q96CX2 325 aaKnown RBP10.32□□□□□ -0.76
TRAPPC13-205ENST00000504243 LRCH3Q96II8 777 aa10.32□□□□□ -0.76
TRAPPC13-205ENST00000504243 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.32□□□□□ -0.76
TRAPPC13-205ENST00000504243 TMEM134Q9H6X4 195 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms