RNA–Protein interactions for RNA: ENST00000504221.5

CAST-212, Transcript of calpastatin, humanhuman

TSL 3

Gene CAST, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-212ENST00000504221 LMTK3Q96Q04 1460 aa13.99□□□□□ -0.17
CAST-212ENST00000504221 KIF21AQ7Z4S6 1674 aa13.98□□□□□ -0.17
CAST-212ENST00000504221 PTPREP23469 700 aa13.97□□□□□ -0.17
CAST-212ENST00000504221 IRX2Q9BZI1 471 aaPredicted RBP13.97□□□□□ -0.17
CAST-212ENST00000504221 MRC2Q9UBG0 1479 aa13.96□□□□□ -0.17
CAST-212ENST00000504221 FBXO41Q8TF61 875 aa13.96□□□□□ -0.17
CAST-212ENST00000504221 ARAP1Q96P48 1450 aa13.95□□□□□ -0.18
CAST-212ENST00000504221 WNT2BQ93097 391 aa13.95□□□□□ -0.18
CAST-212ENST00000504221 MRPL50Q8N5N7 158 aaKnown RBP13.93□□□□□ -0.18
CAST-212ENST00000504221 WDR62O43379 1518 aa13.93□□□□□ -0.18
CAST-212ENST00000504221 PPP1R15BQ5SWA1 713 aa13.92□□□□□ -0.18
CAST-212ENST00000504221 NKX1-1Q15270 411 aaPredicted RBP13.91□□□□□ -0.18
CAST-212ENST00000504221 JPH4Q96JJ6 628 aa13.91□□□□□ -0.18
CAST-212ENST00000504221 DCAF1Q9Y4B6 1507 aa13.9□□□□□ -0.18
CAST-212ENST00000504221 GOLGA8CPA6NN73 597 aa13.9□□□□□ -0.18
CAST-212ENST00000504221 ADAM33Q9BZ11 813 aa13.9□□□□□ -0.18
CAST-212ENST00000504221 ATAD2BQ9ULI0 1458 aa13.88□□□□□ -0.19
CAST-212ENST00000504221 ZDHHC16Q969W1 377 aa13.88□□□□□ -0.19
CAST-212ENST00000504221 NCKAP5LQ9HCH0 1330 aa13.87□□□□□ -0.19
CAST-212ENST00000504221 HMGXB3Q12766 1538 aa13.86□□□□□ -0.19
CAST-212ENST00000504221 EVI5O60447 810 aa13.85□□□□□ -0.19
CAST-212ENST00000504221 CHGAP10645 457 aaKnown RBP13.85□□□□□ -0.19
CAST-212ENST00000504221 NBPF3Q9H094 633 aa13.84□□□□□ -0.19
CAST-212ENST00000504221 ITGBL1O95965 494 aaPredicted RBP13.81□□□□□ -0.2
CAST-212ENST00000504221 PDE4AP27815 886 aa13.81□□□□□ -0.2
CAST-212ENST00000504221 RYDENQ9NUL5 291 aaKnown RBP13.77□□□□□ -0.21
CAST-212ENST00000504221 RABGEF1Q9UJ41 708 aa13.77□□□□□ -0.21
CAST-212ENST00000504221 ERCC6L2Q5T890 1561 aa13.76□□□□□ -0.21
CAST-212ENST00000504221 PPP1R3GB7ZBB8 358 aa13.76□□□□□ -0.21
CAST-212ENST00000504221 ILDR2Q71H61 639 aa13.75□□□□□ -0.21
CAST-212ENST00000504221 RSF1Q96T23 1441 aaPredicted RBP13.74□□□□□ -0.21
CAST-212ENST00000504221 COL9A1P20849 921 aa13.74□□□□□ -0.21
CAST-212ENST00000504221 PROX2Q3B8N5 592 aa13.74□□□□□ -0.21
CAST-212ENST00000504221 PCDHGA10Q9Y5H3 936 aa13.74□□□□□ -0.21
CAST-212ENST00000504221 ANKK1Q8NFD2 765 aa13.72□□□□□ -0.21
CAST-212ENST00000504221 BCAMP50895 628 aa13.7□□□□□ -0.22
CAST-212ENST00000504221 MAP3K9P80192 1104 aa13.7□□□□□ -0.22
CAST-212ENST00000504221 SOWAHBA6NEL2 793 aa13.69□□□□□ -0.22
CAST-212ENST00000504221 MFSD10Q14728 455 aa13.69□□□□□ -0.22
CAST-212ENST00000504221 LAPTM4BQ86VI4 370 aa13.69□□□□□ -0.22
CAST-212ENST00000504221 LARP6Q9BRS8 491 aaKnown RBP13.69□□□□□ -0.22
CAST-212ENST00000504221 EMILIN3Q9NT22 766 aa13.69□□□□□ -0.22
CAST-212ENST00000504221 CADPSQ9ULU8 1353 aa13.69□□□□□ -0.22
CAST-212ENST00000504221 ZCCHC6Q5VYS8 1495 aaKnown RBP13.68□□□□□ -0.22
CAST-212ENST00000504221 BAZ1BQ9UIG0 1483 aaKnown RBP13.68□□□□□ -0.22
CAST-212ENST00000504221 DDX27Q96GQ7 796 aaKnown RBP13.68□□□□□ -0.22
CAST-212ENST00000504221 NYAP1Q6ZVC0 841 aa13.65□□□□□ -0.22
CAST-212ENST00000504221 KIAA1468Q9P260 1216 aa13.64□□□□□ -0.23
CAST-212ENST00000504221 CEP164Q9UPV0 1460 aa13.63□□□□□ -0.23
CAST-212ENST00000504221 DISP3Q9P2K9 1392 aa13.63□□□□□ -0.23
CAST-212ENST00000504221 GTPBP6O43824 516 aaPredicted RBP13.63□□□□□ -0.23
CAST-212ENST00000504221 ONECUT3O60422 494 aaPredicted RBP13.63□□□□□ -0.23
CAST-212ENST00000504221 Q6ZNB5 142 aa13.63□□□□□ -0.23
CAST-212ENST00000504221 FBXW7Q969H0 707 aa13.63□□□□□ -0.23
CAST-212ENST00000504221 ZFRQ96KR1 1074 aaKnown RBP13.63□□□□□ -0.23
CAST-212ENST00000504221 WBP1LQ9NX94 342 aa13.63□□□□□ -0.23
CAST-212ENST00000504221 PHF14O94880 888 aa13.62□□□□□ -0.23
CAST-212ENST00000504221 TYW1BQ6NUM6 668 aa13.62□□□□□ -0.23
CAST-212ENST00000504221 KCNC4Q03721 635 aa13.59□□□□□ -0.23
CAST-212ENST00000504221 HECW2Q9P2P5 1572 aa13.57□□□□□ -0.24
CAST-212ENST00000504221 LCE2BO14633 110 aa13.56□□□□□ -0.24
CAST-212ENST00000504221 C6orf132Q5T0Z8 1188 aa13.54□□□□□ -0.24
CAST-212ENST00000504221 SEPT9Q9UHD8 586 aaPredicted RBP13.54□□□□□ -0.24
CAST-212ENST00000504221 TRIM6-TRIM34B2RNG4 842 aa13.51□□□□□ -0.25
CAST-212ENST00000504221 LAPTM4AQ15012 233 aa13.5□□□□□ -0.25
CAST-212ENST00000504221 FAM98CQ17RN3 349 aaKnown RBP13.5□□□□□ -0.25
CAST-212ENST00000504221 EPAS1Q99814 870 aa13.5□□□□□ -0.25
CAST-212ENST00000504221 TSR3Q9UJK0 312 aaKnown RBP13.49□□□□□ -0.25
CAST-212ENST00000504221 FANCD2Q9BXW9 1451 aa13.48□□□□□ -0.25
CAST-212ENST00000504221 ZNF608Q9ULD9 1512 aaPredicted RBP13.48□□□□□ -0.25
CAST-212ENST00000504221 SYNJ2O15056 1496 aa13.47□□□□□ -0.25
CAST-212ENST00000504221 SMARCA4P51532 1647 aa13.46□□□□□ -0.25
CAST-212ENST00000504221 CAMK2BQ13554 666 aa13.46□□□□□ -0.25
CAST-212ENST00000504221 CADPS2Q86UW7 1296 aa13.46□□□□□ -0.25
CAST-212ENST00000504221 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.46□□□□□ -0.25
CAST-212ENST00000504221 HPS5Q9UPZ3 1129 aa13.44□□□□□ -0.26
CAST-212ENST00000504221 GFRA3O60609 400 aa13.43□□□□□ -0.26
CAST-212ENST00000504221 TRAF7Q6Q0C0 670 aa13.43□□□□□ -0.26
CAST-212ENST00000504221 LRCH3Q96II8 777 aa13.43□□□□□ -0.26
CAST-212ENST00000504221 IFT140Q96RY7 1462 aa13.42□□□□□ -0.26
CAST-212ENST00000504221 URB2Q14146 1524 aaKnown RBP13.41□□□□□ -0.26
CAST-212ENST00000504221 CHD1O14646 1710 aa13.41□□□□□ -0.26
CAST-212ENST00000504221 TJAP1Q5JTD0 557 aa13.39□□□□□ -0.27
CAST-212ENST00000504221 TSKSQ9UJT2 592 aa13.38□□□□□ -0.27
CAST-212ENST00000504221 DPYSL4O14531 572 aa13.37□□□□□ -0.27
CAST-212ENST00000504221 RBM33Q96EV2 1170 aaKnown RBP13.37□□□□□ -0.27
CAST-212ENST00000504221 PEG3Q9GZU2 1588 aa13.35□□□□□ -0.27
CAST-212ENST00000504221 GAPVD1Q14C86 1478 aa13.35□□□□□ -0.27
CAST-212ENST00000504221 PPP4CP60510 307 aa13.33□□□□□ -0.28
CAST-212ENST00000504221 PACS2Q86VP3 889 aa13.33□□□□□ -0.28
CAST-212ENST00000504221 DDX12PQ92771 950 aa13.33□□□□□ -0.28
CAST-212ENST00000504221 PRKD2Q9BZL6 878 aa13.33□□□□□ -0.28
CAST-212ENST00000504221 ADGRL1O94910 1474 aa13.33□□□□□ -0.28
CAST-212ENST00000504221 NRG2O14511 850 aaPredicted RBP13.32□□□□□ -0.28
CAST-212ENST00000504221 EN1Q05925 392 aaPredicted RBP13.3□□□□□ -0.28
CAST-212ENST00000504221 TSR1Q2NL82 804 aaKnown RBP13.3□□□□□ -0.28
CAST-212ENST00000504221 CLASP1Q7Z460 1538 aa13.29□□□□□ -0.28
CAST-212ENST00000504221 EIF4G3O43432 1585 aaKnown RBP13.29□□□□□ -0.28
CAST-212ENST00000504221 PPP1R18Q6NYC8 613 aa13.28□□□□□ -0.28
CAST-212ENST00000504221 V9GY48 417 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms