RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 GLI2P10070 1586 aa6.56□□□□□ -1.36
USP46-205ENST00000504078 IQGAP2Q13576 1575 aa6.56□□□□□ -1.36
USP46-205ENST00000504078 PTPRGP23470 1445 aa6.55□□□□□ -1.36
USP46-205ENST00000504078 EPRSP07814 1512 aaKnown RBP6.55□□□□□ -1.36
USP46-205ENST00000504078 FKBP8Q14318 412 aa6.54□□□□□ -1.36
USP46-205ENST00000504078 PLB1Q6P1J6 1458 aa6.53□□□□□ -1.36
USP46-205ENST00000504078 FBXO3Q9UK99 471 aa6.53□□□□□ -1.36
USP46-205ENST00000504078 TNIKQ9UKE5 1360 aa6.53□□□□□ -1.36
USP46-205ENST00000504078 KIAA0556O60303 1618 aa6.52□□□□□ -1.37
USP46-205ENST00000504078 CABP2Q9NPB3 220 aa6.52□□□□□ -1.37
USP46-205ENST00000504078 TEX14Q8IWB6 1497 aa6.52□□□□□ -1.37
USP46-205ENST00000504078 UACAQ9BZF9 1416 aa6.51□□□□□ -1.37
USP46-205ENST00000504078 DISP1Q96F81 1524 aa6.51□□□□□ -1.37
USP46-205ENST00000504078 GPR153Q6NV75 609 aa6.51□□□□□ -1.37
USP46-205ENST00000504078 CARMIL2Q6F5E8 1435 aa6.5□□□□□ -1.37
USP46-205ENST00000504078 KIF27Q86VH2 1401 aa6.5□□□□□ -1.37
USP46-205ENST00000504078 UHRF1BP1LA0JNW5 1464 aa6.5□□□□□ -1.37
USP46-205ENST00000504078 WDR7Q9Y4E6 1490 aa6.5□□□□□ -1.37
USP46-205ENST00000504078 IGF1RP08069 1367 aa6.5□□□□□ -1.37
USP46-205ENST00000504078 ANKRD13DQ6ZTN6 518 aa6.5□□□□□ -1.37
USP46-205ENST00000504078 KLHL34Q8N239 644 aa6.5□□□□□ -1.37
USP46-205ENST00000504078 KDM5BQ9UGL1 1544 aa6.49□□□□□ -1.37
USP46-205ENST00000504078 CARMIL1Q5VZK9 1371 aa6.48□□□□□ -1.37
USP46-205ENST00000504078 MADDQ8WXG6 1647 aa6.48□□□□□ -1.37
USP46-205ENST00000504078 ARID3CA6NKF2 412 aa6.48□□□□□ -1.37
USP46-205ENST00000504078 PLA2G2EQ9NZK7 142 aa6.48□□□□□ -1.37
USP46-205ENST00000504078 CFAP43Q8NDM7 1665 aa6.47□□□□□ -1.37
USP46-205ENST00000504078 UGGT2Q9NYU1 1516 aa6.46□□□□□ -1.37
USP46-205ENST00000504078 CTTNBP2Q8WZ74 1663 aa6.46□□□□□ -1.37
USP46-205ENST00000504078 FBXO41Q8TF61 875 aa6.46□□□□□ -1.38
USP46-205ENST00000504078 RIMS1Q86UR5 1692 aaKnown RBP6.45□□□□□ -1.38
USP46-205ENST00000504078 PCF11O94913 1555 aaKnown RBP6.45□□□□□ -1.38
USP46-205ENST00000504078 CD109Q6YHK3 1445 aa6.45□□□□□ -1.38
USP46-205ENST00000504078 LSM11P83369 360 aaKnown RBP eCLIP6.45□□□□□ -1.38
USP46-205ENST00000504078 HCSTQ9UBK5 93 aa6.45□□□□□ -1.38
USP46-205ENST00000504078 PTPRMP28827 1452 aa6.45□□□□□ -1.38
USP46-205ENST00000504078 ADAMTSL3P82987 1691 aa6.45□□□□□ -1.38
USP46-205ENST00000504078 FRMPD1Q5SYB0 1578 aa6.44□□□□□ -1.38
USP46-205ENST00000504078 LMTK3Q96Q04 1460 aa6.44□□□□□ -1.38
USP46-205ENST00000504078 ABCA8O94911 1581 aa6.44□□□□□ -1.38
USP46-205ENST00000504078 BCORL1Q5H9F3 1711 aa6.43□□□□□ -1.38
USP46-205ENST00000504078 ZNF316A6NFI3 1004 aaPredicted RBP6.43□□□□□ -1.38
USP46-205ENST00000504078 TMEM92Q6UXU6 159 aa6.43□□□□□ -1.38
USP46-205ENST00000504078 MICALL2Q8IY33 904 aa6.43□□□□□ -1.38
USP46-205ENST00000504078 KCNH8Q96L42 1107 aa6.43□□□□□ -1.38
USP46-205ENST00000504078 MAGI3Q5TCQ9 1506 aa6.43□□□□□ -1.38
USP46-205ENST00000504078 ARHGEF40Q8TER5 1519 aa6.42□□□□□ -1.38
USP46-205ENST00000504078 PBX2P40425 430 aa6.42□□□□□ -1.38
USP46-205ENST00000504078 ARSIQ5FYB1 569 aa6.42□□□□□ -1.38
USP46-205ENST00000504078 SIGLEC1Q9BZZ2 1709 aa6.42□□□□□ -1.38
USP46-205ENST00000504078 RAPGEF2Q9Y4G8 1499 aa6.41□□□□□ -1.38
USP46-205ENST00000504078 VASPP50552 380 aaPredicted RBP6.4□□□□□ -1.38
USP46-205ENST00000504078 HSPA2P54652 639 aa6.4□□□□□ -1.38
USP46-205ENST00000504078 EFCAB3Q8N7B9 438 aa6.39□□□□□ -1.39
USP46-205ENST00000504078 SPATA31D1Q6ZQQ2 1576 aa6.39□□□□□ -1.39
USP46-205ENST00000504078 ABCA9Q8IUA7 1624 aa6.39□□□□□ -1.39
USP46-205ENST00000504078 SOX12O15370 315 aa6.38□□□□□ -1.39
USP46-205ENST00000504078 RAPGEF3O95398 923 aa6.38□□□□□ -1.39
USP46-205ENST00000504078 ILDR2Q71H61 639 aa6.38□□□□□ -1.39
USP46-205ENST00000504078 ARID4BQ4LE39 1312 aaPredicted RBP6.38□□□□□ -1.39
USP46-205ENST00000504078 ARAP3Q8WWN8 1544 aa6.37□□□□□ -1.39
USP46-205ENST00000504078 DISP3Q9P2K9 1392 aa6.37□□□□□ -1.39
USP46-205ENST00000504078 P3H3Q8IVL6 736 aa6.37□□□□□ -1.39
USP46-205ENST00000504078 FER1L4A9Z1Z3 1794 aa6.36□□□□□ -1.39
USP46-205ENST00000504078 CIZ1Q9ULV3 898 aaPredicted RBP6.36□□□□□ -1.39
USP46-205ENST00000504078 RICTORQ6R327 1708 aa6.36□□□□□ -1.39
USP46-205ENST00000504078 RAPGEF6Q8TEU7 1601 aa6.36□□□□□ -1.39
USP46-205ENST00000504078 GOLGA3Q08378 1498 aa6.35□□□□□ -1.39
USP46-205ENST00000504078 RGS20O76081 388 aa6.35□□□□□ -1.39
USP46-205ENST00000504078 TTC37Q6PGP7 1564 aa6.35□□□□□ -1.39
USP46-205ENST00000504078 ATP10BO94823 1461 aa6.34□□□□□ -1.39
USP46-205ENST00000504078 YEATS2Q9ULM3 1422 aa6.34□□□□□ -1.39
USP46-205ENST00000504078 MLECQ14165 292 aa6.34□□□□□ -1.39
USP46-205ENST00000504078 SPOCK2Q92563 424 aa6.34□□□□□ -1.39
USP46-205ENST00000504078 ZFYVE16Q7Z3T8 1539 aa6.34□□□□□ -1.39
USP46-205ENST00000504078 RANGAP1P46060 587 aaPredicted RBP6.33□□□□□ -1.4
USP46-205ENST00000504078 KHSRPQ92945 711 aaKnown RBP eCLIP6.33□□□□□ -1.4
USP46-205ENST00000504078 SAMD9Q5K651 1589 aa6.32□□□□□ -1.4
USP46-205ENST00000504078 FANCAO15360 1455 aa6.32□□□□□ -1.4
USP46-205ENST00000504078 NEO1Q92859 1461 aa6.32□□□□□ -1.4
USP46-205ENST00000504078 PREX1Q8TCU6 1659 aa6.32□□□□□ -1.4
USP46-205ENST00000504078 CFAP74Q9C0B2 1584 aa6.31□□□□□ -1.4
USP46-205ENST00000504078 DENND4BO75064 1496 aaPredicted RBP6.31□□□□□ -1.4
USP46-205ENST00000504078 NUP153P49790 1475 aaKnown RBP6.31□□□□□ -1.4
USP46-205ENST00000504078 CERKQ8TCT0 537 aa6.31□□□□□ -1.4
USP46-205ENST00000504078 HECW1Q76N89 1606 aa6.31□□□□□ -1.4
USP46-205ENST00000504078 FHOD3Q2V2M9 1422 aa6.31□□□□□ -1.4
USP46-205ENST00000504078 EFCAB5A4FU69 1503 aa6.3□□□□□ -1.4
USP46-205ENST00000504078 ZMYM4Q5VZL5 1548 aa6.3□□□□□ -1.4
USP46-205ENST00000504078 ADGRD1Q6QNK2 874 aa6.3□□□□□ -1.4
USP46-205ENST00000504078 POTEEQ6S8J3 1075 aa6.3□□□□□ -1.4
USP46-205ENST00000504078 MS4A4AQ96JQ5 239 aa6.3□□□□□ -1.4
USP46-205ENST00000504078 CDK13Q14004 1512 aaKnown RBP6.3□□□□□ -1.4
USP46-205ENST00000504078 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.3□□□□□ -1.4
USP46-205ENST00000504078 PRXQ9BXM0 1461 aa6.29□□□□□ -1.4
USP46-205ENST00000504078 STRCQ7RTU9 1775 aa6.29□□□□□ -1.4
USP46-205ENST00000504078 TK2O00142 265 aa6.29□□□□□ -1.4
USP46-205ENST00000504078 SOCS7O14512 581 aa6.29□□□□□ -1.4
USP46-205ENST00000504078 ARHGAP33O14559 1287 aa6.29□□□□□ -1.4
USP46-205ENST00000504078 AKNAQ7Z591 1439 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms