RNA–Protein interactions for RNA: ENST00000503674.5

SDHA-203, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,426 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-203ENST00000503674 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.64■□□□□ 0.57
SDHA-203ENST00000503674 TCERG1O14776 1098 aaKnown RBP18.64■□□□□ 0.57
SDHA-203ENST00000503674 KIF7Q2M1P5 1343 aa18.64■□□□□ 0.57
SDHA-203ENST00000503674 C9orf84Q5VXU9 1444 aa18.64■□□□□ 0.57
SDHA-203ENST00000503674 PDE4AP27815 886 aa18.63■□□□□ 0.57
SDHA-203ENST00000503674 DNAJC5Q9H3Z4 198 aa18.63■□□□□ 0.57
SDHA-203ENST00000503674 L3MBTL2Q969R5 705 aa18.62■□□□□ 0.57
SDHA-203ENST00000503674 BACH2Q9BYV9 841 aa18.62■□□□□ 0.57
SDHA-203ENST00000503674 MBD5Q9P267 1494 aa18.62■□□□□ 0.57
SDHA-203ENST00000503674 PZPP20742 1482 aa18.61■□□□□ 0.57
SDHA-203ENST00000503674 POLR1AO95602 1720 aaPredicted RBP18.6■□□□□ 0.57
SDHA-203ENST00000503674 SPATA31E1Q6ZUB1 1445 aa18.6■□□□□ 0.57
SDHA-203ENST00000503674 CCDC141Q6ZP82 1450 aa18.6■□□□□ 0.57
SDHA-203ENST00000503674 GSE1Q14687 1217 aa18.6■□□□□ 0.57
SDHA-203ENST00000503674 ANKRD30BQ9BXX2 1392 aa18.59■□□□□ 0.57
SDHA-203ENST00000503674 ANKRD50Q9ULJ7 1429 aa18.59■□□□□ 0.57
SDHA-203ENST00000503674 MAST1Q9Y2H9 1570 aa18.58■□□□□ 0.56
SDHA-203ENST00000503674 ARHGAP5Q13017 1502 aa18.58■□□□□ 0.56
SDHA-203ENST00000503674 DHX29Q7Z478 1369 aaKnown RBP18.58■□□□□ 0.56
SDHA-203ENST00000503674 RPRD2Q5VT52 1461 aaKnown RBP18.57■□□□□ 0.56
SDHA-203ENST00000503674 CYB5RLQ6IPT4 315 aa18.57■□□□□ 0.56
SDHA-203ENST00000503674 MS4A1P11836 297 aa18.56■□□□□ 0.56
SDHA-203ENST00000503674 RSPH4AQ5TD94 716 aa18.56■□□□□ 0.56
SDHA-203ENST00000503674 KDM5DQ9BY66 1539 aa18.56■□□□□ 0.56
SDHA-203ENST00000503674 PLEKHH2Q8IVE3 1493 aa18.56■□□□□ 0.56
SDHA-203ENST00000503674 NBPF8Q3BBV2 869 aa18.55■□□□□ 0.56
SDHA-203ENST00000503674 SYCP2Q9BX26 1530 aa18.55■□□□□ 0.56
SDHA-203ENST00000503674 TSPY4P0CV99 314 aa18.55■□□□□ 0.56
SDHA-203ENST00000503674 TSPY10P0CW01 314 aa18.55■□□□□ 0.56
SDHA-203ENST00000503674 SLC4A1APQ9BWU0 796 aaKnown RBP18.55■□□□□ 0.56
SDHA-203ENST00000503674 EIF5BO60841 1220 aaKnown RBP18.53■□□□□ 0.56
SDHA-203ENST00000503674 EXOC6Q8TAG9 804 aa18.53■□□□□ 0.56
SDHA-203ENST00000503674 KIAA1107Q9UPP5 1409 aa18.53■□□□□ 0.56
SDHA-203ENST00000503674 SENP3-EIF4A1A0A087X0R7 540 aa18.52■□□□□ 0.56
SDHA-203ENST00000503674 RRP1P56182 461 aaKnown RBP18.52■□□□□ 0.56
SDHA-203ENST00000503674 HNRNPMP52272 730 aaKnown RBP eCLIP18.52■□□□□ 0.55
SDHA-203ENST00000503674 PNISRQ8TF01 805 aaKnown RBP18.52■□□□□ 0.55
SDHA-203ENST00000503674 KIF15Q9NS87 1388 aa18.52■□□□□ 0.55
SDHA-203ENST00000503674 TEX14Q8IWB6 1497 aa18.51■□□□□ 0.55
SDHA-203ENST00000503674 NFKBIBQ15653 356 aa18.51■□□□□ 0.55
SDHA-203ENST00000503674 PLXNC1O60486 1568 aa18.51■□□□□ 0.55
SDHA-203ENST00000503674 FOXD1Q16676 465 aa18.5■□□□□ 0.55
SDHA-203ENST00000503674 FRAT1Q92837 279 aaPredicted RBP18.5■□□□□ 0.55
SDHA-203ENST00000503674 ARAP3Q8WWN8 1544 aa18.49■□□□□ 0.55
SDHA-203ENST00000503674 PLCH2O75038 1416 aa18.49■□□□□ 0.55
SDHA-203ENST00000503674 DDRGK1Q96HY6 314 aa18.48■□□□□ 0.55
SDHA-203ENST00000503674 CNGB1Q14028 1251 aaPredicted RBP18.47■□□□□ 0.55
SDHA-203ENST00000503674 ABCC1P33527 1531 aa18.45■□□□□ 0.54
SDHA-203ENST00000503674 UNC13BO14795 1591 aa18.44■□□□□ 0.54
SDHA-203ENST00000503674 WDR7Q9Y4E6 1490 aa18.43■□□□□ 0.54
SDHA-203ENST00000503674 NUP155O75694 1391 aa18.43■□□□□ 0.54
SDHA-203ENST00000503674 RSPH6AQ9H0K4 717 aa18.43■□□□□ 0.54
SDHA-203ENST00000503674 LRPPRCP42704 1394 aaKnown RBP18.43■□□□□ 0.54
SDHA-203ENST00000503674 ARHGEF12Q9NZN5 1544 aa18.42■□□□□ 0.54
SDHA-203ENST00000503674 RCAN3Q9UKA8 241 aa18.42■□□□□ 0.54
SDHA-203ENST00000503674 PKD2Q13563 968 aa18.41■□□□□ 0.54
SDHA-203ENST00000503674 TMC1Q8TDI8 760 aa18.41■□□□□ 0.54
SDHA-203ENST00000503674 ABCA9Q8IUA7 1624 aa18.41■□□□□ 0.54
SDHA-203ENST00000503674 EFCAB2Q5VUJ9 269 aa18.4■□□□□ 0.54
SDHA-203ENST00000503674 BCORL1Q5H9F3 1711 aa18.4■□□□□ 0.54
SDHA-203ENST00000503674 FAM43AQ8N2R8 423 aa18.4■□□□□ 0.54
SDHA-203ENST00000503674 DUOX2Q9NRD8 1548 aa18.39■□□□□ 0.53
SDHA-203ENST00000503674 FAM135AQ9P2D6 1515 aa18.39■□□□□ 0.53
SDHA-203ENST00000503674 SLC4A3P48751 1232 aa18.38■□□□□ 0.53
SDHA-203ENST00000503674 SKAP1Q86WV1 359 aa18.37■□□□□ 0.53
SDHA-203ENST00000503674 IQGAP3Q86VI3 1631 aa18.37■□□□□ 0.53
SDHA-203ENST00000503674 ERBINQ96RT1 1412 aa18.35■□□□□ 0.53
SDHA-203ENST00000503674 DCAF11Q8TEB1 546 aa18.35■□□□□ 0.53
SDHA-203ENST00000503674 MAGI2Q86UL8 1455 aa18.35■□□□□ 0.53
SDHA-203ENST00000503674 POLR3GLQ9BT43 218 aa18.34■□□□□ 0.53
SDHA-203ENST00000503674 ARID4BQ4LE39 1312 aaPredicted RBP18.34■□□□□ 0.53
SDHA-203ENST00000503674 USP47Q96K76 1375 aa18.33■□□□□ 0.52
SDHA-203ENST00000503674 TRAPPC8Q9Y2L5 1435 aa18.32■□□□□ 0.52
SDHA-203ENST00000503674 BRD4O60885 1362 aaPredicted RBP18.32■□□□□ 0.52
SDHA-203ENST00000503674 RTEL1-TNFRSF6BF6WH68 1400 aa18.31■□□□□ 0.52
SDHA-203ENST00000503674 ASXL2Q76L83 1435 aa18.31■□□□□ 0.52
SDHA-203ENST00000503674 ZFYVE16Q7Z3T8 1539 aa18.31■□□□□ 0.52
SDHA-203ENST00000503674 FRAT2O75474 233 aaPredicted RBP18.3■□□□□ 0.52
SDHA-203ENST00000503674 FANCAO15360 1455 aa18.29■□□□□ 0.52
SDHA-203ENST00000503674 PDE3BQ13370 1112 aa18.29■□□□□ 0.52
SDHA-203ENST00000503674 DAXXQ9UER7 740 aaPredicted RBP18.29■□□□□ 0.52
SDHA-203ENST00000503674 PKNOX2Q96KN3 472 aa18.29■□□□□ 0.52
SDHA-203ENST00000503674 UHRF1BP1Q6BDS2 1440 aa18.29■□□□□ 0.52
SDHA-203ENST00000503674 ROCK2O75116 1388 aaKnown RBP18.28■□□□□ 0.52
SDHA-203ENST00000503674 INO80Q9ULG1 1556 aaPredicted RBP18.28■□□□□ 0.52
SDHA-203ENST00000503674 MYBBP1AQ9BQG0 1328 aaKnown RBP18.27■□□□□ 0.52
SDHA-203ENST00000503674 KDM5CP41229 1560 aa18.27■□□□□ 0.52
SDHA-203ENST00000503674 PLIN1O60240 522 aa18.27■□□□□ 0.51
SDHA-203ENST00000503674 NPM1P06748 294 aaKnown RBP eCLIP18.25■□□□□ 0.51
SDHA-203ENST00000503674 CRBNQ96SW2 442 aa18.25■□□□□ 0.51
SDHA-203ENST00000503674 DEPDC5O75140 1603 aa18.25■□□□□ 0.51
SDHA-203ENST00000503674 CDCA7LQ96GN5 454 aa18.24■□□□□ 0.51
SDHA-203ENST00000503674 KTN1Q86UP2 1357 aaKnown RBP18.24■□□□□ 0.51
SDHA-203ENST00000503674 ATP7AQ04656 1500 aa18.24■□□□□ 0.51
SDHA-203ENST00000503674 SPAG9O60271 1321 aaKnown RBP18.24■□□□□ 0.51
SDHA-203ENST00000503674 RALGAPBQ86X10 1494 aa18.24■□□□□ 0.51
SDHA-203ENST00000503674 KDM2BQ8NHM5 1336 aa18.23■□□□□ 0.51
SDHA-203ENST00000503674 CFAP74Q9C0B2 1584 aa18.23■□□□□ 0.51
SDHA-203ENST00000503674 ATP10AO60312 1499 aa18.23■□□□□ 0.51
SDHA-203ENST00000503674 RALBP1Q15311 655 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms