RNA–Protein interactions for RNA: ENST00000503402.1

SEMA6A-204, Transcript of semaphorin 6A, humanhuman

TSL 3

Gene SEMA6A, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-204ENST00000503402 TROQ12816 1431 aaPredicted RBP11.43□□□□□ -0.58
SEMA6A-204ENST00000503402 GABBR2O75899 941 aa11.42□□□□□ -0.58
SEMA6A-204ENST00000503402 CDC42BPBQ9Y5S2 1711 aa11.42□□□□□ -0.58
SEMA6A-204ENST00000503402 UBTFP17480 764 aaKnown RBP11.41□□□□□ -0.58
SEMA6A-204ENST00000503402 FMN1Q68DA7 1419 aa11.41□□□□□ -0.58
SEMA6A-204ENST00000503402 TRAPPC8Q9Y2L5 1435 aa11.41□□□□□ -0.58
SEMA6A-204ENST00000503402 ABCC1P33527 1531 aa11.4□□□□□ -0.58
SEMA6A-204ENST00000503402 ITSN2Q9NZM3 1697 aa11.4□□□□□ -0.58
SEMA6A-204ENST00000503402 PREX2Q70Z35 1606 aa11.4□□□□□ -0.58
SEMA6A-204ENST00000503402 CLIP1P30622 1438 aa11.39□□□□□ -0.59
SEMA6A-204ENST00000503402 REREQ9P2R6 1566 aa11.39□□□□□ -0.59
SEMA6A-204ENST00000503402 ZRANB1Q9UGI0 708 aa11.39□□□□□ -0.59
SEMA6A-204ENST00000503402 MIER1Q8N108 512 aa11.38□□□□□ -0.59
SEMA6A-204ENST00000503402 KIDINS220Q9ULH0 1771 aa11.38□□□□□ -0.59
SEMA6A-204ENST00000503402 LTBP4Q8N2S1 1624 aa11.38□□□□□ -0.59
SEMA6A-204ENST00000503402 LHX8Q68G74 356 aa11.37□□□□□ -0.59
SEMA6A-204ENST00000503402 ZNF579Q8NAF0 562 aaKnown RBP11.36□□□□□ -0.59
SEMA6A-204ENST00000503402 CDK11AQ9UQ88 783 aaPredicted RBP11.36□□□□□ -0.59
SEMA6A-204ENST00000503402 MLH3Q9UHC1 1453 aa11.36□□□□□ -0.59
SEMA6A-204ENST00000503402 PTPRTO14522 1441 aa11.35□□□□□ -0.59
SEMA6A-204ENST00000503402 NCOA1Q15788 1441 aa11.35□□□□□ -0.59
SEMA6A-204ENST00000503402 AGLP35573 1532 aa11.35□□□□□ -0.59
SEMA6A-204ENST00000503402 CDC42BPAQ5VT25 1732 aa11.35□□□□□ -0.59
SEMA6A-204ENST00000503402 SOCS7O14512 581 aa11.35□□□□□ -0.59
SEMA6A-204ENST00000503402 CAMSAP1Q5T5Y3 1602 aa11.35□□□□□ -0.59
SEMA6A-204ENST00000503402 SYCP2Q9BX26 1530 aa11.34□□□□□ -0.59
SEMA6A-204ENST00000503402 SETD1BQ9UPS6 1966 aaKnown RBP11.34□□□□□ -0.59
SEMA6A-204ENST00000503402 SUPT6HQ7KZ85 1726 aaKnown RBP11.33□□□□□ -0.6
SEMA6A-204ENST00000503402 ESF1Q9H501 851 aaKnown RBP11.33□□□□□ -0.6
SEMA6A-204ENST00000503402 SAMD9LQ8IVG5 1584 aa11.33□□□□□ -0.6
SEMA6A-204ENST00000503402 PLCD3Q8N3E9 789 aa11.32□□□□□ -0.6
SEMA6A-204ENST00000503402 ZNF777Q9ULD5 760 aaPredicted RBP11.32□□□□□ -0.6
SEMA6A-204ENST00000503402 MYO3AQ8NEV4 1616 aa11.31□□□□□ -0.6
SEMA6A-204ENST00000503402 CLTCQ00610 1675 aaKnown RBP11.31□□□□□ -0.6
SEMA6A-204ENST00000503402 PAK3O75914 559 aaPredicted RBP11.31□□□□□ -0.6
SEMA6A-204ENST00000503402 PLEKHG5O94827 1062 aa11.31□□□□□ -0.6
SEMA6A-204ENST00000503402 ZNF335Q9H4Z2 1342 aaPredicted RBP11.31□□□□□ -0.6
SEMA6A-204ENST00000503402 NCKAP5LQ9HCH0 1330 aa11.31□□□□□ -0.6
SEMA6A-204ENST00000503402 MROH2AA6NES4 1674 aa11.3□□□□□ -0.6
SEMA6A-204ENST00000503402 CCDC18Q5T9S5 1454 aa11.3□□□□□ -0.6
SEMA6A-204ENST00000503402 CASKIN1Q8WXD9 1431 aa11.29□□□□□ -0.6
SEMA6A-204ENST00000503402 CNTLNQ9NXG0 1405 aa11.29□□□□□ -0.6
SEMA6A-204ENST00000503402 PHF12Q96QT6 1004 aa11.29□□□□□ -0.6
SEMA6A-204ENST00000503402 ZNF142P52746 1687 aaPredicted RBP11.28□□□□□ -0.6
SEMA6A-204ENST00000503402 ATP7AQ04656 1500 aa11.28□□□□□ -0.6
SEMA6A-204ENST00000503402 HNRNPMP52272 730 aaKnown RBP eCLIP11.27□□□□□ -0.61
SEMA6A-204ENST00000503402 PLXNC1O60486 1568 aa11.27□□□□□ -0.61
SEMA6A-204ENST00000503402 INO80Q9ULG1 1556 aaPredicted RBP11.27□□□□□ -0.61
SEMA6A-204ENST00000503402 CEP170BQ9Y4F5 1589 aaPredicted RBP11.27□□□□□ -0.61
SEMA6A-204ENST00000503402 ZMYM3Q14202 1370 aa11.27□□□□□ -0.61
SEMA6A-204ENST00000503402 NPATQ14207 1427 aa11.26□□□□□ -0.61
SEMA6A-204ENST00000503402 IQSEC2Q5JU85 1478 aa11.26□□□□□ -0.61
SEMA6A-204ENST00000503402 UBAP1LF5GYI3 381 aa11.26□□□□□ -0.61
SEMA6A-204ENST00000503402 FBXO3Q9UK99 471 aa11.26□□□□□ -0.61
SEMA6A-204ENST00000503402 SPAG9O60271 1321 aaKnown RBP11.26□□□□□ -0.61
SEMA6A-204ENST00000503402 GPATCH8Q9UKJ3 1502 aaKnown RBP11.25□□□□□ -0.61
SEMA6A-204ENST00000503402 CLCN6P51797 869 aa11.25□□□□□ -0.61
SEMA6A-204ENST00000503402 TSPYL2Q9H2G4 693 aaPredicted RBP11.25□□□□□ -0.61
SEMA6A-204ENST00000503402 FYCO1Q9BQS8 1478 aa11.25□□□□□ -0.61
SEMA6A-204ENST00000503402 PTPRKQ15262 1439 aa11.24□□□□□ -0.61
SEMA6A-204ENST00000503402 A2MP01023 1474 aa11.24□□□□□ -0.61
SEMA6A-204ENST00000503402 GALR2O43603 387 aaPredicted RBP11.23□□□□□ -0.61
SEMA6A-204ENST00000503402 GGT6Q6P531 493 aa11.23□□□□□ -0.61
SEMA6A-204ENST00000503402 RASEFQ8IZ41 740 aa11.23□□□□□ -0.61
SEMA6A-204ENST00000503402 TCOF1Q13428 1488 aaKnown RBP11.22□□□□□ -0.61
SEMA6A-204ENST00000503402 PLA2R1Q13018 1463 aa11.21□□□□□ -0.61
SEMA6A-204ENST00000503402 POTEIP0CG38 1075 aa11.21□□□□□ -0.61
SEMA6A-204ENST00000503402 TIAM1Q13009 1591 aa11.2□□□□□ -0.62
SEMA6A-204ENST00000503402 MED1Q15648 1581 aaPredicted RBP11.2□□□□□ -0.62
SEMA6A-204ENST00000503402 CCNB3Q8WWL7 1395 aa11.19□□□□□ -0.62
SEMA6A-204ENST00000503402 ZNF644Q9H582 1327 aaPredicted RBP11.19□□□□□ -0.62
SEMA6A-204ENST00000503402 CFDP1Q9UEE9 299 aaPredicted RBP11.19□□□□□ -0.62
SEMA6A-204ENST00000503402 CCDC61Q9Y6R9 512 aa11.19□□□□□ -0.62
SEMA6A-204ENST00000503402 ADGBQ8N7X0 1667 aa11.19□□□□□ -0.62
SEMA6A-204ENST00000503402 DNMT1P26358 1616 aaKnown RBP11.19□□□□□ -0.62
SEMA6A-204ENST00000503402 NEURL4Q96JN8 1562 aa11.19□□□□□ -0.62
SEMA6A-204ENST00000503402 POLR1AO95602 1720 aaPredicted RBP11.18□□□□□ -0.62
SEMA6A-204ENST00000503402 VASPP50552 380 aaPredicted RBP11.18□□□□□ -0.62
SEMA6A-204ENST00000503402 PIP4K2BP78356 416 aa11.18□□□□□ -0.62
SEMA6A-204ENST00000503402 ZBTB47Q9UFB7 747 aaPredicted RBP11.18□□□□□ -0.62
SEMA6A-204ENST00000503402 PLEKHH2Q8IVE3 1493 aa11.18□□□□□ -0.62
SEMA6A-204ENST00000503402 HSPA1LP34931 641 aa11.17□□□□□ -0.62
SEMA6A-204ENST00000503402 NUBP1P53384 320 aa11.17□□□□□ -0.62
SEMA6A-204ENST00000503402 A2ML1A8K2U0 1454 aa11.17□□□□□ -0.62
SEMA6A-204ENST00000503402 KIAA1107Q9UPP5 1409 aa11.17□□□□□ -0.62
SEMA6A-204ENST00000503402 PKD2Q13563 968 aa11.16□□□□□ -0.62
SEMA6A-204ENST00000503402 MTUS2Q5JR59 1369 aa11.16□□□□□ -0.62
SEMA6A-204ENST00000503402 FBXO31Q5XUX0 539 aaPredicted RBP11.15□□□□□ -0.62
SEMA6A-204ENST00000503402 MS4A3Q96HJ5 214 aa11.14□□□□□ -0.63
SEMA6A-204ENST00000503402 DCBLD2Q96PD2 775 aa11.14□□□□□ -0.63
SEMA6A-204ENST00000503402 TNRQ92752 1358 aa11.14□□□□□ -0.63
SEMA6A-204ENST00000503402 MBD5Q9P267 1494 aa11.13□□□□□ -0.63
SEMA6A-204ENST00000503402 EHBP1L1Q8N3D4 1523 aa11.13□□□□□ -0.63
SEMA6A-204ENST00000503402 KDM5DQ9BY66 1539 aa11.13□□□□□ -0.63
SEMA6A-204ENST00000503402 ALKQ9UM73 1620 aa11.13□□□□□ -0.63
SEMA6A-204ENST00000503402 SHANK2Q9UPX8 1470 aa11.12□□□□□ -0.63
SEMA6A-204ENST00000503402 VWDEQ8N2E2 1590 aa11.12□□□□□ -0.63
SEMA6A-204ENST00000503402 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.12□□□□□ -0.63
SEMA6A-204ENST00000503402 CPS1P31327 1500 aa11.11□□□□□ -0.63
SEMA6A-204ENST00000503402 PZPP20742 1482 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms