RNA–Protein interactions for RNA: ENST00000503258.5

PDE4D-210, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-210ENST00000503258 SHANK2Q9UPX8 1470 aa12.83□□□□□ -0.36
PDE4D-210ENST00000503258 AFAP1Q8N556 730 aa12.83□□□□□ -0.36
PDE4D-210ENST00000503258 ARHGAP31Q2M1Z3 1444 aa12.82□□□□□ -0.36
PDE4D-210ENST00000503258 ARHGAP23Q9P227 1491 aa12.81□□□□□ -0.36
PDE4D-210ENST00000503258 CROCC2H7BZ55 1655 aa12.81□□□□□ -0.36
PDE4D-210ENST00000503258 SPAG9O60271 1321 aaKnown RBP12.81□□□□□ -0.36
PDE4D-210ENST00000503258 MROH1Q8NDA8 1641 aa12.81□□□□□ -0.36
PDE4D-210ENST00000503258 UBR1Q8IWV7 1749 aa12.8□□□□□ -0.36
PDE4D-210ENST00000503258 LMTK2Q8IWU2 1503 aa12.8□□□□□ -0.36
PDE4D-210ENST00000503258 PRDM15P57071 1507 aaPredicted RBP12.79□□□□□ -0.36
PDE4D-210ENST00000503258 DISP3Q9P2K9 1392 aa12.79□□□□□ -0.36
PDE4D-210ENST00000503258 NWD1Q149M9 1564 aa12.79□□□□□ -0.36
PDE4D-210ENST00000503258 ABCC3O15438 1527 aa12.78□□□□□ -0.36
PDE4D-210ENST00000503258 CCNB3Q8WWL7 1395 aa12.78□□□□□ -0.36
PDE4D-210ENST00000503258 ARID3CA6NKF2 412 aa12.78□□□□□ -0.36
PDE4D-210ENST00000503258 ESF1Q9H501 851 aaKnown RBP12.78□□□□□ -0.36
PDE4D-210ENST00000503258 TNRQ92752 1358 aa12.76□□□□□ -0.37
PDE4D-210ENST00000503258 MIA2Q96PC5 1412 aa12.76□□□□□ -0.37
PDE4D-210ENST00000503258 UGGT1Q9NYU2 1555 aa12.75□□□□□ -0.37
PDE4D-210ENST00000503258 STRCP1A6NGW2 1772 aa12.75□□□□□ -0.37
PDE4D-210ENST00000503258 LRRC9Q6ZRR7 1453 aa12.75□□□□□ -0.37
PDE4D-210ENST00000503258 DUOX2Q9NRD8 1548 aa12.74□□□□□ -0.37
PDE4D-210ENST00000503258 XIRP1Q702N8 1843 aaKnown RBP12.74□□□□□ -0.37
PDE4D-210ENST00000503258 PTPN23Q9H3S7 1636 aa12.74□□□□□ -0.37
PDE4D-210ENST00000503258 CEBPAP49715 358 aaPredicted RBP12.74□□□□□ -0.37
PDE4D-210ENST00000503258 ERVK-7P63135 1459 aa12.73□□□□□ -0.37
PDE4D-210ENST00000503258 NPHP4O75161 1426 aaPredicted RBP12.73□□□□□ -0.37
PDE4D-210ENST00000503258 ILDR2Q71H61 639 aa12.72□□□□□ -0.37
PDE4D-210ENST00000503258 MLECQ14165 292 aa12.71□□□□□ -0.37
PDE4D-210ENST00000503258 ERBINQ96RT1 1412 aa12.71□□□□□ -0.37
PDE4D-210ENST00000503258 LRRC7Q96NW7 1537 aa12.71□□□□□ -0.38
PDE4D-210ENST00000503258 NCOA3Q9Y6Q9 1424 aa12.69□□□□□ -0.38
PDE4D-210ENST00000503258 NKTRP30414 1462 aaKnown RBP12.68□□□□□ -0.38
PDE4D-210ENST00000503258 CFDP1Q9UEE9 299 aaPredicted RBP12.67□□□□□ -0.38
PDE4D-210ENST00000503258 UBTFP17480 764 aaKnown RBP12.67□□□□□ -0.38
PDE4D-210ENST00000503258 DIP2AQ14689 1571 aa12.67□□□□□ -0.38
PDE4D-210ENST00000503258 CEP152O94986 1710 aa12.66□□□□□ -0.38
PDE4D-210ENST00000503258 MTUS2Q5JR59 1369 aa12.66□□□□□ -0.38
PDE4D-210ENST00000503258 TOM1O60784 492 aa12.66□□□□□ -0.38
PDE4D-210ENST00000503258 THEMISQ8N1K5 641 aaPredicted RBP12.66□□□□□ -0.38
PDE4D-210ENST00000503258 TET3O43151 1660 aa12.66□□□□□ -0.38
PDE4D-210ENST00000503258 FAM135BQ49AJ0 1406 aa12.65□□□□□ -0.38
PDE4D-210ENST00000503258 NCKAP5LQ9HCH0 1330 aa12.65□□□□□ -0.38
PDE4D-210ENST00000503258 SCAF11Q99590 1463 aaKnown RBP12.65□□□□□ -0.38
PDE4D-210ENST00000503258 RPRD2Q5VT52 1461 aaKnown RBP12.64□□□□□ -0.39
PDE4D-210ENST00000503258 ZNF335Q9H4Z2 1342 aaPredicted RBP12.64□□□□□ -0.39
PDE4D-210ENST00000503258 CHIC1Q5VXU3 224 aa12.63□□□□□ -0.39
PDE4D-210ENST00000503258 ANKLE2Q86XL3 938 aa12.62□□□□□ -0.39
PDE4D-210ENST00000503258 ADGRB3O60242 1522 aa12.62□□□□□ -0.39
PDE4D-210ENST00000503258 PIK3C2BO00750 1634 aa12.61□□□□□ -0.39
PDE4D-210ENST00000503258 ADGRL2O95490 1459 aa12.61□□□□□ -0.39
PDE4D-210ENST00000503258 MYOM3Q5VTT5 1437 aa12.61□□□□□ -0.39
PDE4D-210ENST00000503258 GCC2Q8IWJ2 1684 aa12.61□□□□□ -0.39
PDE4D-210ENST00000503258 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.6□□□□□ -0.39
PDE4D-210ENST00000503258 HNRNPMP52272 730 aaKnown RBP eCLIP12.6□□□□□ -0.392e-6■■□□□ 12.3
PDE4D-210ENST00000503258 SHPRHQ149N8 1683 aa12.59□□□□□ -0.39
PDE4D-210ENST00000503258 UBAP1LF5GYI3 381 aa12.59□□□□□ -0.39
PDE4D-210ENST00000503258 EFCAB6Q5THR3 1501 aa12.58□□□□□ -0.39
PDE4D-210ENST00000503258 LAMC1P11047 1609 aa12.58□□□□□ -0.4
PDE4D-210ENST00000503258 CHD2O14647 1828 aaKnown RBP12.58□□□□□ -0.4
PDE4D-210ENST00000503258 NOS1P29475 1434 aa12.57□□□□□ -0.4
PDE4D-210ENST00000503258 AHDC1Q5TGY3 1603 aaPredicted RBP12.57□□□□□ -0.4
PDE4D-210ENST00000503258 VPS8Q8N3P4 1428 aa12.57□□□□□ -0.4
PDE4D-210ENST00000503258 UNC13BO14795 1591 aa12.57□□□□□ -0.4
PDE4D-210ENST00000503258 CDK12Q9NYV4 1490 aaPredicted RBP12.55□□□□□ -0.4
PDE4D-210ENST00000503258 IQGAP3Q86VI3 1631 aa12.54□□□□□ -0.4
PDE4D-210ENST00000503258 FGD6Q6ZV73 1430 aa12.54□□□□□ -0.4
PDE4D-210ENST00000503258 MYT1LQ9UL68 1186 aa12.53□□□□□ -0.4
PDE4D-210ENST00000503258 PIK3R4Q99570 1358 aa12.53□□□□□ -0.4
PDE4D-210ENST00000503258 PRAG1Q86YV5 1406 aa12.52□□□□□ -0.41
PDE4D-210ENST00000503258 SETD1AO15047 1707 aaKnown RBP12.52□□□□□ -0.41
PDE4D-210ENST00000503258 ROBO1Q9Y6N7 1651 aa12.51□□□□□ -0.41
PDE4D-210ENST00000503258 HSPA1LP34931 641 aa12.51□□□□□ -0.41
PDE4D-210ENST00000503258 COL16A1Q07092 1604 aaPredicted RBP12.51□□□□□ -0.41
PDE4D-210ENST00000503258 TMEM2Q9UHN6 1383 aa12.51□□□□□ -0.41
PDE4D-210ENST00000503258 WASHC2CQ9Y4E1 1318 aa12.5□□□□□ -0.41
PDE4D-210ENST00000503258 TMEM131LA2VDJ0 1609 aa12.5□□□□□ -0.41
PDE4D-210ENST00000503258 DCCP43146 1447 aa12.5□□□□□ -0.41
PDE4D-210ENST00000503258 ATP1B4Q9UN42 357 aaPredicted RBP12.48□□□□□ -0.41
PDE4D-210ENST00000503258 ZFYVE9O95405 1425 aa12.48□□□□□ -0.41
PDE4D-210ENST00000503258 PHLPP1O60346 1717 aa12.48□□□□□ -0.41
PDE4D-210ENST00000503258 GGT6Q6P531 493 aa12.48□□□□□ -0.41
PDE4D-210ENST00000503258 KIF3BO15066 747 aa12.47□□□□□ -0.41
PDE4D-210ENST00000503258 ABCC5O15440 1437 aa12.47□□□□□ -0.41
PDE4D-210ENST00000503258 TSPY4P0CV99 314 aa12.47□□□□□ -0.41
PDE4D-210ENST00000503258 TSPY10P0CW01 314 aa12.47□□□□□ -0.41
PDE4D-210ENST00000503258 NHSL1Q5SYE7 1610 aa12.46□□□□□ -0.41
PDE4D-210ENST00000503258 PLEKHG1Q9ULL1 1385 aa12.46□□□□□ -0.41
PDE4D-210ENST00000503258 DAPK1P53355 1430 aa12.46□□□□□ -0.41
PDE4D-210ENST00000503258 XRN1Q8IZH2 1706 aaKnown RBP12.46□□□□□ -0.41
PDE4D-210ENST00000503258 KANK1Q14678 1352 aa12.46□□□□□ -0.42
PDE4D-210ENST00000503258 ZNF777Q9ULD5 760 aaPredicted RBP12.45□□□□□ -0.42
PDE4D-210ENST00000503258 ZNF644Q9H582 1327 aaPredicted RBP12.44□□□□□ -0.42
PDE4D-210ENST00000503258 KCNA6P17658 529 aa12.44□□□□□ -0.42
PDE4D-210ENST00000503258 SETBP1Q9Y6X0 1596 aa12.44□□□□□ -0.42
PDE4D-210ENST00000503258 RANGAP1P46060 587 aaPredicted RBP12.44□□□□□ -0.42
PDE4D-210ENST00000503258 PLPPR3Q6T4P5 718 aa12.44□□□□□ -0.42
PDE4D-210ENST00000503258 TRPM2O94759 1503 aa12.43□□□□□ -0.42
PDE4D-210ENST00000503258 FBXO31Q5XUX0 539 aaPredicted RBP12.42□□□□□ -0.42
PDE4D-210ENST00000503258 SLC52A1Q9NWF4 448 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms