RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 TRAPPC8Q9Y2L5 1435 aa16.22■□□□□ 0.19
USP46-204ENST00000503060 UBE2Q2Q8WVN8 375 aa16.2■□□□□ 0.18
USP46-204ENST00000503060 ABCA9Q8IUA7 1624 aa16.2■□□□□ 0.18
USP46-204ENST00000503060 ERBINQ96RT1 1412 aa16.2■□□□□ 0.18
USP46-204ENST00000503060 ASXL2Q76L83 1435 aa16.19■□□□□ 0.18
USP46-204ENST00000503060 WASHC2AQ641Q2 1341 aa16.18■□□□□ 0.18
USP46-204ENST00000503060 C14orf37Q86TY3 774 aa16.18■□□□□ 0.18
USP46-204ENST00000503060 ANP32CO43423 234 aa16.18■□□□□ 0.18
USP46-204ENST00000503060 IQGAP3Q86VI3 1631 aa16.18■□□□□ 0.18
USP46-204ENST00000503060 RTEL1-TNFRSF6BF6WH68 1400 aa16.17■□□□□ 0.18
USP46-204ENST00000503060 MAGI2Q86UL8 1455 aa16.17■□□□□ 0.18
USP46-204ENST00000503060 SPATA31E1Q6ZUB1 1445 aa16.16■□□□□ 0.18
USP46-204ENST00000503060 PDIA4P13667 645 aaKnown RBP16.16■□□□□ 0.18
USP46-204ENST00000503060 FANCAO15360 1455 aa16.16■□□□□ 0.18
USP46-204ENST00000503060 SPAG9O60271 1321 aaKnown RBP16.16■□□□□ 0.18
USP46-204ENST00000503060 UHRF1BP1Q6BDS2 1440 aa16.16■□□□□ 0.18
USP46-204ENST00000503060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.15■□□□□ 0.18
USP46-204ENST00000503060 CCER2I3L3R5 266 aa16.15■□□□□ 0.18
USP46-204ENST00000503060 FBXO3Q9UK99 471 aa16.15■□□□□ 0.18
USP46-204ENST00000503060 ZFYVE16Q7Z3T8 1539 aa16.15■□□□□ 0.18
USP46-204ENST00000503060 AFAP1Q8N556 730 aa16.14■□□□□ 0.17
USP46-204ENST00000503060 NPM1P06748 294 aaKnown RBP eCLIP16.13■□□□□ 0.17
USP46-204ENST00000503060 CCDC7Q96M83 1385 aa16.12■□□□□ 0.17
USP46-204ENST00000503060 ZNF326Q5BKZ1 582 aaKnown RBP16.12■□□□□ 0.17
USP46-204ENST00000503060 PLA2R1Q13018 1463 aa16.12■□□□□ 0.17
USP46-204ENST00000503060 CCDC144AA2RUR9 1427 aa16.11■□□□□ 0.17
USP46-204ENST00000503060 C11orf95C9JLR9 678 aaPredicted RBP16.11■□□□□ 0.17
USP46-204ENST00000503060 ADGRL1O94910 1474 aa16.11■□□□□ 0.17
USP46-204ENST00000503060 RALGAPBQ86X10 1494 aa16.11■□□□□ 0.17
USP46-204ENST00000503060 INO80Q9ULG1 1556 aaPredicted RBP16.1■□□□□ 0.17
USP46-204ENST00000503060 SCAPERQ9BY12 1400 aa16.09■□□□□ 0.17
USP46-204ENST00000503060 ATP7AQ04656 1500 aa16.09■□□□□ 0.17
USP46-204ENST00000503060 CNTLNQ9NXG0 1405 aa16.09■□□□□ 0.17
USP46-204ENST00000503060 POLR1AO95602 1720 aaPredicted RBP16.08■□□□□ 0.16
USP46-204ENST00000503060 USP47Q96K76 1375 aa16.08■□□□□ 0.16
USP46-204ENST00000503060 ATP10AO60312 1499 aa16.08■□□□□ 0.16
USP46-204ENST00000503060 KDM5CP41229 1560 aa16.07■□□□□ 0.16
USP46-204ENST00000503060 DCAF11Q8TEB1 546 aa16.07■□□□□ 0.16
USP46-204ENST00000503060 KDM2AQ9Y2K7 1162 aa16.06■□□□□ 0.16
USP46-204ENST00000503060 KIF7Q2M1P5 1343 aa16.06■□□□□ 0.16
USP46-204ENST00000503060 DEPDC5O75140 1603 aa16.04■□□□□ 0.16
USP46-204ENST00000503060 CD109Q6YHK3 1445 aa16.02■□□□□ 0.16
USP46-204ENST00000503060 CARD11Q9BXL7 1154 aa16.02■□□□□ 0.16
USP46-204ENST00000503060 BCORL1Q5H9F3 1711 aa16.02■□□□□ 0.15
USP46-204ENST00000503060 CFAP74Q9C0B2 1584 aa16.02■□□□□ 0.15
USP46-204ENST00000503060 A2MP01023 1474 aa16.02■□□□□ 0.15
USP46-204ENST00000503060 PRAG1Q86YV5 1406 aa16.01■□□□□ 0.15
USP46-204ENST00000503060 PLCB2Q00722 1185 aa16.01■□□□□ 0.15
USP46-204ENST00000503060 E9PCH4 1651 aa16.01■□□□□ 0.15
USP46-204ENST00000503060 EIF2AK4Q9P2K8 1649 aaKnown RBP16.01■□□□□ 0.15
USP46-204ENST00000503060 DHX29Q7Z478 1369 aaKnown RBP16.01■□□□□ 0.15
USP46-204ENST00000503060 MYT1LQ9UL68 1186 aa16■□□□□ 0.15
USP46-204ENST00000503060 RGL3Q3MIN7 710 aa16■□□□□ 0.15
USP46-204ENST00000503060 ZNF518AQ6AHZ1 1483 aa16■□□□□ 0.15
USP46-204ENST00000503060 VWDEQ8N2E2 1590 aa16■□□□□ 0.15
USP46-204ENST00000503060 KIDINS220Q9ULH0 1771 aa15.99■□□□□ 0.15
USP46-204ENST00000503060 TRPM1Q7Z4N2 1603 aa15.99■□□□□ 0.15
USP46-204ENST00000503060 ARID4BQ4LE39 1312 aaPredicted RBP15.98■□□□□ 0.15
USP46-204ENST00000503060 KANK1Q14678 1352 aa15.98■□□□□ 0.15
USP46-204ENST00000503060 TET3O43151 1660 aa15.98■□□□□ 0.15
USP46-204ENST00000503060 ROCK2O75116 1388 aaKnown RBP15.98■□□□□ 0.15
USP46-204ENST00000503060 TRPM2O94759 1503 aa15.97■□□□□ 0.15
USP46-204ENST00000503060 KIF3BO15066 747 aa15.97■□□□□ 0.15
USP46-204ENST00000503060 PTPRTO14522 1441 aa15.96■□□□□ 0.15
USP46-204ENST00000503060 POGZQ7Z3K3 1410 aa15.96■□□□□ 0.15
USP46-204ENST00000503060 PRDM15P57071 1507 aaPredicted RBP15.96■□□□□ 0.15
USP46-204ENST00000503060 MROH1Q8NDA8 1641 aa15.96■□□□□ 0.14
USP46-204ENST00000503060 TMEM132AQ24JP5 1023 aa15.95■□□□□ 0.14
USP46-204ENST00000503060 SPHKAPQ2M3C7 1700 aa15.95■□□□□ 0.14
USP46-204ENST00000503060 PRKRIP1Q9H875 184 aaPredicted RBP15.95■□□□□ 0.14
USP46-204ENST00000503060 GPRASP1Q5JY77 1395 aa15.94■□□□□ 0.14
USP46-204ENST00000503060 ST20-MTHFSA0A0A6YYL1 179 aa15.93■□□□□ 0.14
USP46-204ENST00000503060 LAMC1P11047 1609 aa15.93■□□□□ 0.14
USP46-204ENST00000503060 MLH3Q9UHC1 1453 aa15.93■□□□□ 0.14
USP46-204ENST00000503060 NEO1Q92859 1461 aa15.92■□□□□ 0.14
USP46-204ENST00000503060 CLTCL1P53675 1640 aa15.91■□□□□ 0.14
USP46-204ENST00000503060 CEP152O94986 1710 aa15.91■□□□□ 0.14
USP46-204ENST00000503060 NBPF1Q3BBV0 1214 aa15.91■□□□□ 0.14
USP46-204ENST00000503060 POLR3GLQ9BT43 218 aa15.91■□□□□ 0.14
USP46-204ENST00000503060 HECW2Q9P2P5 1572 aa15.91■□□□□ 0.14
USP46-204ENST00000503060 PDE4CQ08493 712 aa15.89■□□□□ 0.13
USP46-204ENST00000503060 RNF17Q9BXT8 1623 aaKnown RBP15.89■□□□□ 0.13
USP46-204ENST00000503060 AEBP2Q6ZN18 517 aaPredicted RBP15.88■□□□□ 0.13
USP46-204ENST00000503060 EFCAB6Q5THR3 1501 aa15.88■□□□□ 0.13
USP46-204ENST00000503060 LMTK2Q8IWU2 1503 aa15.88■□□□□ 0.13
USP46-204ENST00000503060 FRMPD1Q5SYB0 1578 aa15.88■□□□□ 0.13
USP46-204ENST00000503060 CYB5RLQ6IPT4 315 aa15.87■□□□□ 0.13
USP46-204ENST00000503060 CCDC184Q52MB2 194 aa15.86■□□□□ 0.13
USP46-204ENST00000503060 RIMBP3CA6NJZ7 1639 aa15.86■□□□□ 0.13
USP46-204ENST00000503060 RIMBP3BA6NNM3 1639 aa15.86■□□□□ 0.13
USP46-204ENST00000503060 MADDQ8WXG6 1647 aa15.86■□□□□ 0.13
USP46-204ENST00000503060 RIMBP3Q9UFD9 1639 aa15.86■□□□□ 0.13
USP46-204ENST00000503060 MAP3K4Q9Y6R4 1608 aa15.86■□□□□ 0.13
USP46-204ENST00000503060 HAP1P54257 671 aaPredicted RBP15.86■□□□□ 0.13
USP46-204ENST00000503060 ABCA6Q8N139 1617 aa15.85■□□□□ 0.13
USP46-204ENST00000503060 PPRC1Q5VV67 1664 aaKnown RBP15.85■□□□□ 0.13
USP46-204ENST00000503060 STAC3Q96MF2 364 aa15.85■□□□□ 0.13
USP46-204ENST00000503060 NEURL4Q96JN8 1562 aa15.85■□□□□ 0.13
USP46-204ENST00000503060 NEFLP07196 543 aa15.85■□□□□ 0.13
USP46-204ENST00000503060 PKNOX2Q96KN3 472 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms