RNA–Protein interactions for RNA: ENST00000502495.1

SCLT1-203, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 1,811 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-203ENST00000502495 SOWAHBA6NEL2 793 aa6.77□□□□□ -1.33
SCLT1-203ENST00000502495 PPP1R3GB7ZBB8 358 aa6.76□□□□□ -1.33
SCLT1-203ENST00000502495 BCAMP50895 628 aa6.76□□□□□ -1.33
SCLT1-203ENST00000502495 PPP1R15BQ5SWA1 713 aa6.76□□□□□ -1.33
SCLT1-203ENST00000502495 DNAJC5Q9H3Z4 198 aa6.76□□□□□ -1.33
SCLT1-203ENST00000502495 EVI5O60447 810 aa6.75□□□□□ -1.33
SCLT1-203ENST00000502495 NKX1-1Q15270 411 aaPredicted RBP6.74□□□□□ -1.33
SCLT1-203ENST00000502495 VSIG10Q8N0Z9 540 aa6.74□□□□□ -1.33
SCLT1-203ENST00000502495 NRG2O14511 850 aaPredicted RBP6.73□□□□□ -1.33
SCLT1-203ENST00000502495 ZFRQ96KR1 1074 aaKnown RBP6.72□□□□□ -1.33
SCLT1-203ENST00000502495 CRISPLD2Q9H0B8 497 aa6.72□□□□□ -1.33
SCLT1-203ENST00000502495 TSHZ2Q9NRE2 1034 aa6.72□□□□□ -1.33
SCLT1-203ENST00000502495 WBP1LQ9NX94 342 aa6.72□□□□□ -1.33
SCLT1-203ENST00000502495 LCE2BO14633 110 aa6.71□□□□□ -1.33
SCLT1-203ENST00000502495 ONECUT3O60422 494 aaPredicted RBP6.71□□□□□ -1.33
SCLT1-203ENST00000502495 PROX2Q3B8N5 592 aa6.71□□□□□ -1.33
SCLT1-203ENST00000502495 RYDENQ9NUL5 291 aaKnown RBP6.71□□□□□ -1.34
SCLT1-203ENST00000502495 GTPBP6O43824 516 aaPredicted RBP6.7□□□□□ -1.34
SCLT1-203ENST00000502495 PDE4AP27815 886 aa6.7□□□□□ -1.34
SCLT1-203ENST00000502495 MAP3K9P80192 1104 aa6.69□□□□□ -1.34
SCLT1-203ENST00000502495 ZNF787Q6DD87 383 aa6.69□□□□□ -1.34
SCLT1-203ENST00000502495 FBXW7Q969H0 707 aa6.69□□□□□ -1.34
SCLT1-203ENST00000502495 KIAA1468Q9P260 1216 aa6.69□□□□□ -1.34
SCLT1-203ENST00000502495 TSR3Q9UJK0 312 aaKnown RBP6.69□□□□□ -1.34
SCLT1-203ENST00000502495 KDM2AQ9Y2K7 1162 aa6.69□□□□□ -1.34
SCLT1-203ENST00000502495 COL9A1P20849 921 aa6.68□□□□□ -1.34
SCLT1-203ENST00000502495 TYW1BQ6NUM6 668 aa6.67□□□□□ -1.34
SCLT1-203ENST00000502495 PRKD2Q9BZL6 878 aa6.67□□□□□ -1.34
SCLT1-203ENST00000502495 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.67□□□□□ -1.34
SCLT1-203ENST00000502495 LRCH3Q96II8 777 aa6.66□□□□□ -1.34
SCLT1-203ENST00000502495 HPS5Q9UPZ3 1129 aa6.66□□□□□ -1.34
SCLT1-203ENST00000502495 PCDHGA10Q9Y5H3 936 aa6.66□□□□□ -1.34
SCLT1-203ENST00000502495 V9GY48 417 aaPredicted RBP6.66□□□□□ -1.34
SCLT1-203ENST00000502495 FAM98CQ17RN3 349 aaKnown RBP6.65□□□□□ -1.34
SCLT1-203ENST00000502495 PHF14O94880 888 aa6.64□□□□□ -1.35
SCLT1-203ENST00000502495 SEPT9Q9UHD8 586 aaPredicted RBP6.64□□□□□ -1.35
SCLT1-203ENST00000502495 LOC100996750A0A140TA64 210 aa6.62□□□□□ -1.35
SCLT1-203ENST00000502495 KRTAP4-6Q9BYQ5 205 aa6.62□□□□□ -1.35
SCLT1-203ENST00000502495 TRIM6-TRIM34B2RNG4 842 aa6.62□□□□□ -1.35
SCLT1-203ENST00000502495 PPP4CP60510 307 aa6.62□□□□□ -1.35
SCLT1-203ENST00000502495 ZNF775Q96BV0 537 aaPredicted RBP6.62□□□□□ -1.35
SCLT1-203ENST00000502495 DDX27Q96GQ7 796 aaKnown RBP6.62□□□□□ -1.35
SCLT1-203ENST00000502495 EPAS1Q99814 870 aa6.62□□□□□ -1.35
SCLT1-203ENST00000502495 NCKAP5LQ9HCH0 1330 aa6.62□□□□□ -1.35
SCLT1-203ENST00000502495 LARP6Q9BRS8 491 aaKnown RBP6.6□□□□□ -1.35
SCLT1-203ENST00000502495 PDZRN3Q9UPQ7 1066 aa6.6□□□□□ -1.35
SCLT1-203ENST00000502495 C6orf132Q5T0Z8 1188 aa6.6□□□□□ -1.35
SCLT1-203ENST00000502495 BCANQ96GW7 911 aa6.6□□□□□ -1.35
SCLT1-203ENST00000502495 TJAP1Q5JTD0 557 aa6.59□□□□□ -1.35
SCLT1-203ENST00000502495 IL21Q9HBE4 155 aa6.59□□□□□ -1.35
SCLT1-203ENST00000502495 PPP1R18Q6NYC8 613 aa6.58□□□□□ -1.36
SCLT1-203ENST00000502495 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.58□□□□□ -1.36
SCLT1-203ENST00000502495 PACS2Q86VP3 889 aa6.57□□□□□ -1.36
SCLT1-203ENST00000502495 MFSD10Q14728 455 aa6.57□□□□□ -1.36
SCLT1-203ENST00000502495 GGCXP38435 758 aa6.55□□□□□ -1.36
SCLT1-203ENST00000502495 MTRQ99707 1265 aa6.55□□□□□ -1.36
SCLT1-203ENST00000502495 EMILIN3Q9NT22 766 aa6.55□□□□□ -1.36
SCLT1-203ENST00000502495 CADPS2Q86UW7 1296 aa6.52□□□□□ -1.37
SCLT1-203ENST00000502495 RBM33Q96EV2 1170 aaKnown RBP6.51□□□□□ -1.37
SCLT1-203ENST00000502495 SAMD7Q7Z3H4 446 aa6.5□□□□□ -1.37
SCLT1-203ENST00000502495 TMUB1Q9BVT8 246 aa6.5□□□□□ -1.37
SCLT1-203ENST00000502495 WDR70Q9NW82 654 aa6.5□□□□□ -1.37
SCLT1-203ENST00000502495 DGAT1O75907 488 aa6.49□□□□□ -1.37
SCLT1-203ENST00000502495 HDGFP51858 240 aaKnown RBP6.49□□□□□ -1.37
SCLT1-203ENST00000502495 PKDCCQ504Y2 493 aa6.49□□□□□ -1.37
SCLT1-203ENST00000502495 NECTIN2Q92692 538 aa6.49□□□□□ -1.37
SCLT1-203ENST00000502495 NBR1Q14596 966 aa6.48□□□□□ -1.37
SCLT1-203ENST00000502495 ZNF516Q92618 1163 aa6.48□□□□□ -1.37
SCLT1-203ENST00000502495 TSKSQ9UJT2 592 aa6.48□□□□□ -1.37
SCLT1-203ENST00000502495 MYT1Q01538 1121 aa6.46□□□□□ -1.38
SCLT1-203ENST00000502495 TREML4Q6UXN2 200 aa6.46□□□□□ -1.38
SCLT1-203ENST00000502495 NBPF26B4DH59 902 aa6.45□□□□□ -1.38
SCLT1-203ENST00000502495 MAP3K7O43318 606 aa6.45□□□□□ -1.38
SCLT1-203ENST00000502495 EN1Q05925 392 aaPredicted RBP6.45□□□□□ -1.38
SCLT1-203ENST00000502495 NKX2-3Q8TAU0 364 aa6.44□□□□□ -1.38
SCLT1-203ENST00000502495 CERKQ8TCT0 537 aa6.44□□□□□ -1.38
SCLT1-203ENST00000502495 DDX12PQ92771 950 aa6.44□□□□□ -1.38
SCLT1-203ENST00000502495 CDCA7LQ96GN5 454 aa6.44□□□□□ -1.38
SCLT1-203ENST00000502495 SMAPO00193 183 aa6.43□□□□□ -1.38
SCLT1-203ENST00000502495 DPYSL4O14531 572 aa6.43□□□□□ -1.38
SCLT1-203ENST00000502495 RNF40O75150 1001 aa6.43□□□□□ -1.38
SCLT1-203ENST00000502495 SLC19A1P41440 591 aa6.43□□□□□ -1.38
SCLT1-203ENST00000502495 PRSS12P56730 875 aa6.43□□□□□ -1.38
SCLT1-203ENST00000502495 P3H3Q8IVL6 736 aa6.43□□□□□ -1.38
SCLT1-203ENST00000502495 APLP1P51693 650 aa6.43□□□□□ -1.38
SCLT1-203ENST00000502495 CAMK2BQ13554 666 aa6.43□□□□□ -1.38
SCLT1-203ENST00000502495 TATDN2Q93075 761 aa6.43□□□□□ -1.38
SCLT1-203ENST00000502495 PNMA3Q9UL41 463 aa6.43□□□□□ -1.38
SCLT1-203ENST00000502495 PRR20EP86478 221 aa6.42□□□□□ -1.38
SCLT1-203ENST00000502495 PRR20CP86479 221 aa6.42□□□□□ -1.38
SCLT1-203ENST00000502495 PRR20DP86480 221 aa6.42□□□□□ -1.38
SCLT1-203ENST00000502495 PRR20BP86481 221 aa6.42□□□□□ -1.38
SCLT1-203ENST00000502495 PRR20AP86496 221 aa6.42□□□□□ -1.38
SCLT1-203ENST00000502495 TSR1Q2NL82 804 aaKnown RBP6.41□□□□□ -1.38
SCLT1-203ENST00000502495 TRIM67Q6ZTA4 783 aa6.41□□□□□ -1.38
SCLT1-203ENST00000502495 KCNV2Q8TDN2 545 aa6.41□□□□□ -1.38
SCLT1-203ENST00000502495 POTECB2RU33 542 aa6.4□□□□□ -1.38
SCLT1-203ENST00000502495 PRKCSHP14314 528 aaPredicted RBP6.4□□□□□ -1.38
SCLT1-203ENST00000502495 SLC4A3P48751 1232 aa6.4□□□□□ -1.38
SCLT1-203ENST00000502495 COPS2P61201 443 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms