RNA–Protein interactions for RNA: ENST00000502492.5

SNF8-202, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNF8, Length 2,319 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-202ENST00000502492 TSPY4P0CV99 314 aa31.49■■■□□ 2.63
SNF8-202ENST00000502492 TSPY10P0CW01 314 aa31.49■■■□□ 2.63
SNF8-202ENST00000502492 ZNF326Q5BKZ1 582 aaKnown RBP31.49■■■□□ 2.63
SNF8-202ENST00000502492 ARHGAP5Q13017 1502 aa31.48■■■□□ 2.63
SNF8-202ENST00000502492 PPP4R2Q9NY27 417 aa31.47■■■□□ 2.63
SNF8-202ENST00000502492 ARAP3Q8WWN8 1544 aa31.45■■■□□ 2.63
SNF8-202ENST00000502492 KIF15Q9NS87 1388 aa31.45■■■□□ 2.62
SNF8-202ENST00000502492 ROCK2O75116 1388 aaKnown RBP31.43■■■□□ 2.62
SNF8-202ENST00000502492 GLI2P10070 1586 aa31.43■■■□□ 2.62
SNF8-202ENST00000502492 CD109Q6YHK3 1445 aa31.43■■■□□ 2.62
SNF8-202ENST00000502492 DIP2BQ9P265 1576 aa31.42■■■□□ 2.62
SNF8-202ENST00000502492 EFCAB2Q5VUJ9 269 aa31.42■■■□□ 2.62
SNF8-202ENST00000502492 HNRNPMP52272 730 aaKnown RBP eCLIP31.4■■■□□ 2.62
SNF8-202ENST00000502492 FAM69CQ0P6D2 419 aa31.4■■■□□ 2.62
SNF8-202ENST00000502492 SAMD9LQ8IVG5 1584 aa31.39■■■□□ 2.62
SNF8-202ENST00000502492 CARD11Q9BXL7 1154 aa31.37■■■□□ 2.61
SNF8-202ENST00000502492 CCDC141Q6ZP82 1450 aa31.36■■■□□ 2.61
SNF8-202ENST00000502492 FANCAO15360 1455 aa31.35■■■□□ 2.61
SNF8-202ENST00000502492 SMG6Q86US8 1419 aaKnown RBP31.34■■■□□ 2.61
SNF8-202ENST00000502492 MAP3K4Q9Y6R4 1608 aa31.34■■■□□ 2.61
SNF8-202ENST00000502492 POLR3GLQ9BT43 218 aa31.33■■■□□ 2.61
SNF8-202ENST00000502492 RSPH4AQ5TD94 716 aa31.33■■■□□ 2.61
SNF8-202ENST00000502492 PLEKHH2Q8IVE3 1493 aa31.31■■■□□ 2.6
SNF8-202ENST00000502492 FAM135AQ9P2D6 1515 aa31.31■■■□□ 2.6
SNF8-202ENST00000502492 SYCP2Q9BX26 1530 aa31.28■■■□□ 2.6
SNF8-202ENST00000502492 DCAF11Q8TEB1 546 aa31.27■■■□□ 2.6
SNF8-202ENST00000502492 ST20-MTHFSA0A0A6YYL1 179 aa31.26■■■□□ 2.6
SNF8-202ENST00000502492 KDM2AQ9Y2K7 1162 aa31.26■■■□□ 2.6
SNF8-202ENST00000502492 FANCIQ9NVI1 1328 aa31.26■■■□□ 2.59
SNF8-202ENST00000502492 ABCC1P33527 1531 aa31.26■■■□□ 2.59
SNF8-202ENST00000502492 PNISRQ8TF01 805 aaKnown RBP31.26■■■□□ 2.59
SNF8-202ENST00000502492 KIF13AQ9H1H9 1805 aa31.24■■■□□ 2.59
SNF8-202ENST00000502492 MAST1Q9Y2H9 1570 aa31.23■■■□□ 2.59
SNF8-202ENST00000502492 KTN1Q86UP2 1357 aaKnown RBP31.22■■■□□ 2.59
SNF8-202ENST00000502492 NUDCQ9Y266 331 aa31.22■■■□□ 2.59
SNF8-202ENST00000502492 CFAP74Q9C0B2 1584 aa31.21■■■□□ 2.59
SNF8-202ENST00000502492 RNF123Q5XPI4 1314 aa31.21■■■□□ 2.59
SNF8-202ENST00000502492 E9PCH4 1651 aa31.21■■■□□ 2.59
SNF8-202ENST00000502492 CNGB1Q14028 1251 aaPredicted RBP31.2■■■□□ 2.59
SNF8-202ENST00000502492 ADGRL1O94910 1474 aa31.2■■■□□ 2.59
SNF8-202ENST00000502492 NEO1Q92859 1461 aa31.2■■■□□ 2.58
SNF8-202ENST00000502492 UNC13BO14795 1591 aa31.19■■■□□ 2.58
SNF8-202ENST00000502492 B4GALNT3Q6L9W6 998 aa31.18■■■□□ 2.58
SNF8-202ENST00000502492 TMC1Q8TDI8 760 aa31.18■■■□□ 2.58
SNF8-202ENST00000502492 PRAG1Q86YV5 1406 aa31.17■■■□□ 2.58
SNF8-202ENST00000502492 TRPM1Q7Z4N2 1603 aa31.17■■■□□ 2.58
SNF8-202ENST00000502492 CCDC144AA2RUR9 1427 aa31.17■■■□□ 2.58
SNF8-202ENST00000502492 SCAPERQ9BY12 1400 aa31.17■■■□□ 2.58
SNF8-202ENST00000502492 MSH5O43196 834 aa31.16■■■□□ 2.58
SNF8-202ENST00000502492 TRAPPC8Q9Y2L5 1435 aa31.16■■■□□ 2.58
SNF8-202ENST00000502492 LRPPRCP42704 1394 aaKnown RBP31.16■■■□□ 2.58
SNF8-202ENST00000502492 BRD4O60885 1362 aaPredicted RBP31.15■■■□□ 2.58
SNF8-202ENST00000502492 RALBP1Q15311 655 aa31.15■■■□□ 2.58
SNF8-202ENST00000502492 PLA2R1Q13018 1463 aa31.13■■■□□ 2.57
SNF8-202ENST00000502492 PPRC1Q5VV67 1664 aaKnown RBP31.13■■■□□ 2.57
SNF8-202ENST00000502492 MYBBP1AQ9BQG0 1328 aaKnown RBP31.13■■■□□ 2.57
SNF8-202ENST00000502492 PLXNC1O60486 1568 aa31.11■■■□□ 2.57
SNF8-202ENST00000502492 TSPOAP1O95153 1857 aa31.11■■■□□ 2.57
SNF8-202ENST00000502492 GPRASP1Q5JY77 1395 aa31.1■■■□□ 2.57
SNF8-202ENST00000502492 AFAP1Q8N556 730 aa31.09■■■□□ 2.57
SNF8-202ENST00000502492 IQGAP3Q86VI3 1631 aa31.07■■■□□ 2.57
SNF8-202ENST00000502492 LAMC1P11047 1609 aa31.06■■■□□ 2.56
SNF8-202ENST00000502492 TRHP20396 242 aaPredicted RBP31.06■■■□□ 2.56
SNF8-202ENST00000502492 A2MP01023 1474 aa31.05■■■□□ 2.56
SNF8-202ENST00000502492 POGZQ7Z3K3 1410 aa31.03■■■□□ 2.56
SNF8-202ENST00000502492 ZNF518AQ6AHZ1 1483 aa31.03■■■□□ 2.56
SNF8-202ENST00000502492 ATP10AO60312 1499 aa31.01■■■□□ 2.55
SNF8-202ENST00000502492 PARD3Q8TEW0 1356 aa31.01■■■□□ 2.55
SNF8-202ENST00000502492 SPAG9O60271 1321 aaKnown RBP31.01■■■□□ 2.55
SNF8-202ENST00000502492 NBPF1Q3BBV0 1214 aa31.01■■■□□ 2.55
SNF8-202ENST00000502492 DUOX2Q9NRD8 1548 aa31■■■□□ 2.55
SNF8-202ENST00000502492 MAGI2Q86UL8 1455 aa31■■■□□ 2.55
SNF8-202ENST00000502492 PRDM15P57071 1507 aaPredicted RBP30.99■■■□□ 2.55
SNF8-202ENST00000502492 RGL3Q3MIN7 710 aa30.99■■■□□ 2.55
SNF8-202ENST00000502492 RTEL1-TNFRSF6BF6WH68 1400 aa30.98■■■□□ 2.55
SNF8-202ENST00000502492 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.97■■■□□ 2.551e-6■■■■□ 19.4
SNF8-202ENST00000502492 COL17A1Q9UMD9 1497 aaPredicted RBP30.96■■■□□ 2.55
SNF8-202ENST00000502492 PER1O15534 1290 aaPredicted RBP30.96■■■□□ 2.55
SNF8-202ENST00000502492 NLRP13Q86W25 1043 aa30.96■■■□□ 2.55
SNF8-202ENST00000502492 RAPGEF3O95398 923 aa30.96■■■□□ 2.55
SNF8-202ENST00000502492 ERBINQ96RT1 1412 aa30.96■■■□□ 2.55
SNF8-202ENST00000502492 EIF2AK4Q9P2K8 1649 aaKnown RBP30.95■■■□□ 2.55
SNF8-202ENST00000502492 ZFYVE16Q7Z3T8 1539 aa30.95■■■□□ 2.54
SNF8-202ENST00000502492 TESK2Q96S53 571 aa30.93■■■□□ 2.54
SNF8-202ENST00000502492 INO80Q9ULG1 1556 aaPredicted RBP30.92■■■□□ 2.54
SNF8-202ENST00000502492 WASHC2CQ9Y4E1 1318 aa30.92■■■□□ 2.54
SNF8-202ENST00000502492 ATP7AQ04656 1500 aa30.91■■■□□ 2.54
SNF8-202ENST00000502492 SENP3-EIF4A1A0A087X0R7 540 aa30.91■■■□□ 2.54
SNF8-202ENST00000502492 RICTORQ6R327 1708 aa30.89■■■□□ 2.54
SNF8-202ENST00000502492 CCDC136Q96JN2 1154 aa30.89■■■□□ 2.54
SNF8-202ENST00000502492 MLH3Q9UHC1 1453 aa30.88■■■□□ 2.53
SNF8-202ENST00000502492 DISP3Q9P2K9 1392 aa30.88■■■□□ 2.53
SNF8-202ENST00000502492 MYT1LQ9UL68 1186 aa30.87■■■□□ 2.53
SNF8-202ENST00000502492 FRMPD1Q5SYB0 1578 aa30.87■■■□□ 2.53
SNF8-202ENST00000502492 KIDINS220Q9ULH0 1771 aa30.84■■■□□ 2.53
SNF8-202ENST00000502492 HECW2Q9P2P5 1572 aa30.84■■■□□ 2.53
SNF8-202ENST00000502492 INSRP06213 1382 aa30.83■■■□□ 2.53
SNF8-202ENST00000502492 RNF17Q9BXT8 1623 aaKnown RBP30.82■■■□□ 2.52
SNF8-202ENST00000502492 PDE3BQ13370 1112 aa30.82■■■□□ 2.52
SNF8-202ENST00000502492 ZMYM4Q5VZL5 1548 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms