RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 HSP90B2PQ58FF3 399 aa5.92□□□□□ -1.46
NEAT1-202ENST00000501122 CCDC39Q9UFE4 941 aa5.92□□□□□ -1.46
NEAT1-202ENST00000501122 CDR1P51861 262 aa5.91□□□□□ -1.46
NEAT1-202ENST00000501122 KIF20AO95235 890 aa5.91□□□□□ -1.46
NEAT1-202ENST00000501122 PDE4AP27815 886 aa5.91□□□□□ -1.46
NEAT1-202ENST00000501122 CCAR2Q8N163 923 aaKnown RBP5.91□□□□□ -1.46
NEAT1-202ENST00000501122 CT47A1Q5JQC4 288 aaPredicted RBP5.91□□□□□ -1.46
NEAT1-202ENST00000501122 ZFP91Q96JP5 570 aaPredicted RBP5.91□□□□□ -1.46
NEAT1-202ENST00000501122 TRERF1Q96PN7 1200 aa5.91□□□□□ -1.46
NEAT1-202ENST00000501122 CCDC91Q7Z6B0 441 aa5.91□□□□□ -1.46
NEAT1-202ENST00000501122 ZNF592Q92610 1267 aa5.9□□□□□ -1.46
NEAT1-202ENST00000501122 ACBD3Q9H3P7 528 aa5.9□□□□□ -1.46
NEAT1-202ENST00000501122 CCER2I3L3R5 266 aa5.9□□□□□ -1.46
NEAT1-202ENST00000501122 TEX2Q8IWB9 1127 aa5.9□□□□□ -1.47
NEAT1-202ENST00000501122 SLC4A3P48751 1232 aa5.9□□□□□ -1.47
NEAT1-202ENST00000501122 NASPP49321 788 aaPredicted RBP5.9□□□□□ -1.47
NEAT1-202ENST00000501122 NAP1L1P55209 391 aaKnown RBP5.9□□□□□ -1.47
NEAT1-202ENST00000501122 LRCH2Q5VUJ6 765 aa5.9□□□□□ -1.47
NEAT1-202ENST00000501122 GOLGA6L10A0A0M3HER8 536 aa5.9□□□□□ -1.47
NEAT1-202ENST00000501122 CCDC34Q96HJ3 373 aa5.9□□□□□ -1.47
NEAT1-202ENST00000501122 FAM107BQ9H098 131 aa5.9□□□□□ -1.47
NEAT1-202ENST00000501122 HMMRO75330 724 aa5.89□□□□□ -1.47
NEAT1-202ENST00000501122 GNL2Q13823 731 aaKnown RBP5.89□□□□□ -1.47
NEAT1-202ENST00000501122 C11orf95C9JLR9 678 aaPredicted RBP5.89□□□□□ -1.47
NEAT1-202ENST00000501122 DDX11Q96FC9 970 aa5.89□□□□□ -1.47
NEAT1-202ENST00000501122 LIG1P18858 919 aa5.89□□□□□ -1.47
NEAT1-202ENST00000501122 MS4A1P11836 297 aa5.88□□□□□ -1.47
NEAT1-202ENST00000501122 CCDC173Q0VFZ6 552 aa5.88□□□□□ -1.47
NEAT1-202ENST00000501122 TTLL5Q6EMB2 1281 aa5.88□□□□□ -1.47
NEAT1-202ENST00000501122 CCP110O43303 1012 aa5.88□□□□□ -1.47
NEAT1-202ENST00000501122 SLC26A8Q96RN1 970 aa5.88□□□□□ -1.47
NEAT1-202ENST00000501122 HMGB1P1B2RPK0 211 aaPredicted RBP5.88□□□□□ -1.47
NEAT1-202ENST00000501122 MNAT1P51948 309 aa5.88□□□□□ -1.47
NEAT1-202ENST00000501122 TPM4P67936 248 aa5.88□□□□□ -1.47
NEAT1-202ENST00000501122 INCENPQ9NQS7 918 aa5.88□□□□□ -1.47
NEAT1-202ENST00000501122 DYNC1I1O14576 645 aa5.88□□□□□ -1.47
NEAT1-202ENST00000501122 TICAM2Q86XR7 235 aa5.88□□□□□ -1.47
NEAT1-202ENST00000501122 DDX49Q9Y6V7 483 aaKnown RBP5.88□□□□□ -1.47
NEAT1-202ENST00000501122 SECISBP2LQ93073 1101 aaKnown RBP5.87□□□□□ -1.47
NEAT1-202ENST00000501122 KIAA0754O94854 1291 aa5.87□□□□□ -1.47
NEAT1-202ENST00000501122 TOMM22Q9NS69 142 aa5.87□□□□□ -1.47
NEAT1-202ENST00000501122 MYCBPQ99417 103 aaPredicted RBP5.87□□□□□ -1.47
NEAT1-202ENST00000501122 TPM3P06753 285 aa5.87□□□□□ -1.47
NEAT1-202ENST00000501122 TPM1P09493 284 aa5.87□□□□□ -1.47
NEAT1-202ENST00000501122 CHMP3Q9Y3E7 222 aa5.87□□□□□ -1.47
NEAT1-202ENST00000501122 ISY1Q9ULR0 285 aaKnown RBP5.87□□□□□ -1.47
NEAT1-202ENST00000501122 TRAK2O60296 914 aa5.86□□□□□ -1.47
NEAT1-202ENST00000501122 RALBP1Q15311 655 aa5.86□□□□□ -1.47
NEAT1-202ENST00000501122 MCCP23508 829 aa5.86□□□□□ -1.47
NEAT1-202ENST00000501122 VGFO15240 615 aaPredicted RBP5.86□□□□□ -1.47
NEAT1-202ENST00000501122 KNSTRNQ9Y448 316 aa5.86□□□□□ -1.47
NEAT1-202ENST00000501122 CCDC70Q6NSX1 233 aa5.86□□□□□ -1.47
NEAT1-202ENST00000501122 ZSCAN30Q86W11 494 aa5.86□□□□□ -1.47
NEAT1-202ENST00000501122 SEPT14Q6ZU15 432 aa5.86□□□□□ -1.47
NEAT1-202ENST00000501122 TRIM6-TRIM34B2RNG4 842 aa5.86□□□□□ -1.47
NEAT1-202ENST00000501122 TRIM34Q9BYJ4 488 aa5.86□□□□□ -1.47
NEAT1-202ENST00000501122 NBPF1Q3BBV0 1214 aa5.86□□□□□ -1.47
NEAT1-202ENST00000501122 ENOX2Q16206 610 aaKnown RBP5.86□□□□□ -1.47
NEAT1-202ENST00000501122 PPP1R15AO75807 674 aaPredicted RBP5.85□□□□□ -1.47
NEAT1-202ENST00000501122 DCTN1Q14203 1278 aa5.85□□□□□ -1.47
NEAT1-202ENST00000501122 SKIDA1Q1XH10 827 aa5.85□□□□□ -1.47
NEAT1-202ENST00000501122 KIAA1328Q86T90 577 aa5.85□□□□□ -1.47
NEAT1-202ENST00000501122 ANKRD20A12PQ8NF67 263 aa5.84□□□□□ -1.47
NEAT1-202ENST00000501122 DNAAF4Q8WXU2 420 aa5.84□□□□□ -1.47
NEAT1-202ENST00000501122 SASS6Q6UVJ0 657 aa5.84□□□□□ -1.47
NEAT1-202ENST00000501122 AEBP2Q6ZN18 517 aaPredicted RBP5.84□□□□□ -1.47
NEAT1-202ENST00000501122 CLCN1P35523 988 aa5.84□□□□□ -1.48
NEAT1-202ENST00000501122 P3H3Q8IVL6 736 aa5.84□□□□□ -1.48
NEAT1-202ENST00000501122 CCDC94Q9BW85 323 aaPredicted RBP5.84□□□□□ -1.48
NEAT1-202ENST00000501122 CENPHQ9H3R5 247 aa5.84□□□□□ -1.48
NEAT1-202ENST00000501122 ANAPC15P60006 121 aa5.83□□□□□ -1.48
NEAT1-202ENST00000501122 IFT57Q9NWB7 429 aa5.83□□□□□ -1.48
NEAT1-202ENST00000501122 CHMP5Q9NZZ3 219 aa5.83□□□□□ -1.48
NEAT1-202ENST00000501122 NF2P35240 595 aa5.83□□□□□ -1.48
NEAT1-202ENST00000501122 STK31Q9BXU1 1019 aa5.83□□□□□ -1.48
NEAT1-202ENST00000501122 FAM161AQ3B820 660 aa5.83□□□□□ -1.48
NEAT1-202ENST00000501122 ERCC4Q92889 916 aaPredicted RBP5.83□□□□□ -1.48
NEAT1-202ENST00000501122 SIN3AQ96ST3 1273 aa5.83□□□□□ -1.48
NEAT1-202ENST00000501122 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.83□□□□□ -1.484e-10■□□□□ 10.2
NEAT1-202ENST00000501122 FRAT2O75474 233 aaPredicted RBP5.83□□□□□ -1.48
NEAT1-202ENST00000501122 DZIP1Q86YF9 867 aaKnown RBP5.83□□□□□ -1.48
NEAT1-202ENST00000501122 HOMER1Q86YM7 354 aa5.83□□□□□ -1.48
NEAT1-202ENST00000501122 CERS3Q8IU89 383 aa5.82□□□□□ -1.48
NEAT1-202ENST00000501122 SWAP70Q9UH65 585 aa5.82□□□□□ -1.48
NEAT1-202ENST00000501122 SPDYE4A6NLX3 237 aa5.82□□□□□ -1.48
NEAT1-202ENST00000501122 SOX12O15370 315 aa5.82□□□□□ -1.48
NEAT1-202ENST00000501122 ZRSR2Q15696 482 aaKnown RBP5.82□□□□□ -1.48
NEAT1-202ENST00000501122 SRPK2P78362 688 aaKnown RBP5.82□□□□□ -1.48
NEAT1-202ENST00000501122 TTC31Q49AM3 519 aaPredicted RBP5.82□□□□□ -1.48
NEAT1-202ENST00000501122 SH3BGRP55822 239 aaPredicted RBP5.82□□□□□ -1.48
NEAT1-202ENST00000501122 U2SURPO15042 1029 aaKnown RBP5.82□□□□□ -1.48
NEAT1-202ENST00000501122 NOL10Q9BSC4 688 aaKnown RBP5.82□□□□□ -1.48
NEAT1-202ENST00000501122 FOXD4L1Q9NU39 408 aa5.82□□□□□ -1.48
NEAT1-202ENST00000501122 GTF2F1P35269 517 aaKnown RBP eCLIP5.82□□□□□ -1.482e-59■■■■■ 32.6
NEAT1-202ENST00000501122 TPD52L1Q16890 204 aaPredicted RBP5.81□□□□□ -1.48
NEAT1-202ENST00000501122 CAVIN1Q6NZI2 390 aaKnown RBP5.81□□□□□ -1.48
NEAT1-202ENST00000501122 RUFY1Q96T51 708 aa5.81□□□□□ -1.48
NEAT1-202ENST00000501122 RASSF4Q9H2L5 321 aa5.81□□□□□ -1.48
NEAT1-202ENST00000501122 A0A1B0GUL7 405 aa5.81□□□□□ -1.48
NEAT1-202ENST00000501122 CCDC97Q96F63 343 aaPredicted RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms