RNA–Protein interactions for RNA: ENST00000498804.1

TRBVA-201, Transcript of T cell receptor beta variable A (pseudogene), humanhuman

BASIC

Gene TRBVA, Length 316 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBVA-201ENST00000498804 STAC3Q96MF2 364 aa7.86□□□□□ -1.15
TRBVA-201ENST00000498804 PRIM1P49642 420 aaKnown RBP7.85□□□□□ -1.15
TRBVA-201ENST00000498804 ADAM33Q9BZ11 813 aa7.85□□□□□ -1.15
TRBVA-201ENST00000498804 PPP1R3GB7ZBB8 358 aa7.83□□□□□ -1.16
TRBVA-201ENST00000498804 HRO43593 1189 aa7.82□□□□□ -1.16
TRBVA-201ENST00000498804 P3H3Q8IVL6 736 aa7.82□□□□□ -1.16
TRBVA-201ENST00000498804 DDX12PQ92771 950 aa7.82□□□□□ -1.16
TRBVA-201ENST00000498804 VPS9D1Q9Y2B5 631 aa7.82□□□□□ -1.16
TRBVA-201ENST00000498804 ARHGEF1Q92888 912 aaKnown RBP7.81□□□□□ -1.16
TRBVA-201ENST00000498804 ZBED2Q9BTP6 218 aa7.81□□□□□ -1.16
TRBVA-201ENST00000498804 NBR1Q14596 966 aa7.8□□□□□ -1.16
TRBVA-201ENST00000498804 MLLT3P42568 568 aaPredicted RBP7.79□□□□□ -1.16
TRBVA-201ENST00000498804 EN1Q05925 392 aaPredicted RBP7.79□□□□□ -1.16
TRBVA-201ENST00000498804 C6orf132Q5T0Z8 1188 aa7.79□□□□□ -1.16
TRBVA-201ENST00000498804 NBPF3Q9H094 633 aa7.79□□□□□ -1.16
TRBVA-201ENST00000498804 ONECUT3O60422 494 aaPredicted RBP7.78□□□□□ -1.16
TRBVA-201ENST00000498804 BHMG1C9JSJ3 638 aaPredicted RBP7.76□□□□□ -1.17
TRBVA-201ENST00000498804 MAP3K7O43318 606 aa7.76□□□□□ -1.17
TRBVA-201ENST00000498804 VSIG10Q8N0Z9 540 aa7.76□□□□□ -1.17
TRBVA-201ENST00000498804 CERKQ8TCT0 537 aa7.76□□□□□ -1.17
TRBVA-201ENST00000498804 RABGEF1Q9UJ41 708 aa7.76□□□□□ -1.17
TRBVA-201ENST00000498804 GRXCR2A6NFK2 248 aa7.75□□□□□ -1.17
TRBVA-201ENST00000498804 SEMA3EO15041 775 aa7.75□□□□□ -1.17
TRBVA-201ENST00000498804 COL9A1P20849 921 aa7.75□□□□□ -1.17
TRBVA-201ENST00000498804 TSR1Q2NL82 804 aaKnown RBP7.75□□□□□ -1.17
TRBVA-201ENST00000498804 MRPL50Q8N5N7 158 aaKnown RBP7.75□□□□□ -1.17
TRBVA-201ENST00000498804 RBM33Q96EV2 1170 aaKnown RBP7.75□□□□□ -1.17
TRBVA-201ENST00000498804 HCSTQ9UBK5 93 aa7.75□□□□□ -1.17
TRBVA-201ENST00000498804 GOLGA8CPA6NN73 597 aa7.74□□□□□ -1.17
TRBVA-201ENST00000498804 OSBPP22059 807 aa7.74□□□□□ -1.17
TRBVA-201ENST00000498804 LAPTM4BQ86VI4 370 aa7.73□□□□□ -1.17
TRBVA-201ENST00000498804 CDHR5Q9HBB8 845 aa7.73□□□□□ -1.17
TRBVA-201ENST00000498804 TRIM6-TRIM34B2RNG4 842 aa7.71□□□□□ -1.18
TRBVA-201ENST00000498804 KCTD12Q96CX2 325 aaKnown RBP7.71□□□□□ -1.18
TRBVA-201ENST00000498804 PROX2Q3B8N5 592 aa7.7□□□□□ -1.18
TRBVA-201ENST00000498804 PACS2Q86VP3 889 aa7.69□□□□□ -1.18
TRBVA-201ENST00000498804 WNT2BQ93097 391 aa7.69□□□□□ -1.18
TRBVA-201ENST00000498804 KIAA1468Q9P260 1216 aa7.69□□□□□ -1.18
TRBVA-201ENST00000498804 RBM27Q9P2N5 1060 aaKnown RBP7.68□□□□□ -1.18
TRBVA-201ENST00000498804 TESPA1A2RU30 521 aaPredicted RBP7.67□□□□□ -1.18
TRBVA-201ENST00000498804 C3orf80F5H4A9 247 aa7.67□□□□□ -1.18
TRBVA-201ENST00000498804 PRSS12P56730 875 aa7.67□□□□□ -1.18
TRBVA-201ENST00000498804 ANKK1Q8NFD2 765 aa7.67□□□□□ -1.18
TRBVA-201ENST00000498804 THSD4Q6ZMP0 1018 aa7.66□□□□□ -1.18
TRBVA-201ENST00000498804 CDCA7LQ96GN5 454 aa7.66□□□□□ -1.18
TRBVA-201ENST00000498804 FAM198AQ9UFP1 575 aa7.66□□□□□ -1.18
TRBVA-201ENST00000498804 FAM98CQ17RN3 349 aaKnown RBP7.65□□□□□ -1.18
TRBVA-201ENST00000498804 SMYD5Q6GMV2 418 aa7.65□□□□□ -1.18
TRBVA-201ENST00000498804 NPDC1Q9NQX5 325 aaPredicted RBP7.65□□□□□ -1.18
TRBVA-201ENST00000498804 NBPF26B4DH59 902 aa7.63□□□□□ -1.19
TRBVA-201ENST00000498804 PTPN5P54829 565 aa7.63□□□□□ -1.19
TRBVA-201ENST00000498804 RBM26Q5T8P6 1007 aaKnown RBP7.63□□□□□ -1.19
TRBVA-201ENST00000498804 ZFRQ96KR1 1074 aaKnown RBP7.63□□□□□ -1.19
TRBVA-201ENST00000498804 TSKSQ9UJT2 592 aa7.63□□□□□ -1.19
TRBVA-201ENST00000498804 NYAP1Q6ZVC0 841 aa7.62□□□□□ -1.19
TRBVA-201ENST00000498804 SOWAHBA6NEL2 793 aa7.61□□□□□ -1.19
TRBVA-201ENST00000498804 SEPT9Q9UHD8 586 aaPredicted RBP7.61□□□□□ -1.19
TRBVA-201ENST00000498804 GPR37O15354 613 aa7.6□□□□□ -1.19
TRBVA-201ENST00000498804 LRCH3Q96II8 777 aa7.6□□□□□ -1.19
TRBVA-201ENST00000498804 PLA2G2EQ9NZK7 142 aa7.6□□□□□ -1.19
TRBVA-201ENST00000498804 TATDN2Q93075 761 aa7.59□□□□□ -1.19
TRBVA-201ENST00000498804 HDGFP51858 240 aaKnown RBP7.58□□□□□ -1.2
TRBVA-201ENST00000498804 PTGDRQ13258 359 aa7.58□□□□□ -1.2
TRBVA-201ENST00000498804 TTC13Q8NBP0 860 aa7.58□□□□□ -1.2
TRBVA-201ENST00000498804 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.58□□□□□ -1.2
TRBVA-201ENST00000498804 PNMA3Q9UL41 463 aa7.58□□□□□ -1.2
TRBVA-201ENST00000498804 SLC24A1O60721 1099 aa7.57□□□□□ -1.2
TRBVA-201ENST00000498804 PADI6Q6TGC4 694 aa7.57□□□□□ -1.2
TRBVA-201ENST00000498804 NECTIN2Q92692 538 aa7.57□□□□□ -1.2
TRBVA-201ENST00000498804 NUTM2FA1L443 756 aa7.56□□□□□ -1.2
TRBVA-201ENST00000498804 SMAPO00193 183 aa7.56□□□□□ -1.2
TRBVA-201ENST00000498804 FCHSD2O94868 740 aa7.56□□□□□ -1.2
TRBVA-201ENST00000498804 BCAMP50895 628 aa7.56□□□□□ -1.2
TRBVA-201ENST00000498804 NUDT18Q6ZVK8 323 aa7.56□□□□□ -1.2
TRBVA-201ENST00000498804 TSR3Q9UJK0 312 aaKnown RBP7.56□□□□□ -1.2
TRBVA-201ENST00000498804 FECHP22830 423 aa7.55□□□□□ -1.2
TRBVA-201ENST00000498804 SLC4A3P48751 1232 aa7.55□□□□□ -1.2
TRBVA-201ENST00000498804 IFFO2Q5TF58 517 aa7.55□□□□□ -1.2
TRBVA-201ENST00000498804 TULP1O00294 542 aaPredicted RBP7.54□□□□□ -1.2
TRBVA-201ENST00000498804 FAM161AQ3B820 660 aa7.54□□□□□ -1.2
TRBVA-201ENST00000498804 HPS5Q9UPZ3 1129 aa7.53□□□□□ -1.2
TRBVA-201ENST00000498804 PPP4CP60510 307 aa7.52□□□□□ -1.21
TRBVA-201ENST00000498804 SAMD7Q7Z3H4 446 aa7.52□□□□□ -1.21
TRBVA-201ENST00000498804 RBM46Q8TBY0 533 aaKnown RBP7.52□□□□□ -1.21
TRBVA-201ENST00000498804 HIC1Q14526 733 aa7.51□□□□□ -1.21
TRBVA-201ENST00000498804 WBP1LQ9NX94 342 aa7.51□□□□□ -1.21
TRBVA-201ENST00000498804 ITGBL1O95965 494 aaPredicted RBP7.5□□□□□ -1.21
TRBVA-201ENST00000498804 SLF2Q8IX21 1173 aa7.5□□□□□ -1.21
TRBVA-201ENST00000498804 EYA1Q99502 592 aa7.5□□□□□ -1.21
TRBVA-201ENST00000498804 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.49□□□□□ -1.21
TRBVA-201ENST00000498804 OATP04181 439 aa7.48□□□□□ -1.21
TRBVA-201ENST00000498804 DNAJB2P25686 324 aa7.48□□□□□ -1.21
TRBVA-201ENST00000498804 ADGRG1Q9Y653 693 aa7.48□□□□□ -1.21
TRBVA-201ENST00000498804 RNF40O75150 1001 aa7.47□□□□□ -1.21
TRBVA-201ENST00000498804 SWT1Q5T5J6 900 aaKnown RBP7.47□□□□□ -1.21
TRBVA-201ENST00000498804 GPIHBP1Q8IV16 184 aa7.47□□□□□ -1.21
TRBVA-201ENST00000498804 PRR14Q9BWN1 585 aa7.47□□□□□ -1.21
TRBVA-201ENST00000498804 GNPATO15228 680 aa7.46□□□□□ -1.22
TRBVA-201ENST00000498804 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.45□□□□□ -1.22
TRBVA-201ENST00000498804 RGS20O76081 388 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms