RNA–Protein interactions for RNA: ENST00000498550.5

PDS5B-209, Transcript of PDS5 cohesin associated factor B, humanhuman

TSL 1 (best)

Gene PDS5B, Length 4,238 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5B-209ENST00000498550 RGPD4Q7Z3J3 1758 aa6□□□□□ -1.45
PDS5B-209ENST00000498550 C9orf84Q5VXU9 1444 aa6□□□□□ -1.45
PDS5B-209ENST00000498550 FAM69CQ0P6D2 419 aa6□□□□□ -1.45
PDS5B-209ENST00000498550 CHMP7Q8WUX9 453 aaPredicted RBP5.99□□□□□ -1.45
PDS5B-209ENST00000498550 ATP10AO60312 1499 aa5.99□□□□□ -1.45
PDS5B-209ENST00000498550 RREB1Q92766 1687 aa5.98□□□□□ -1.45
PDS5B-209ENST00000498550 PRAG1Q86YV5 1406 aa5.98□□□□□ -1.45
PDS5B-209ENST00000498550 CERKQ8TCT0 537 aa5.97□□□□□ -1.45
PDS5B-209ENST00000498550 PTPRKQ15262 1439 aa5.97□□□□□ -1.45
PDS5B-209ENST00000498550 GOLGA3Q08378 1498 aa5.97□□□□□ -1.45
PDS5B-209ENST00000498550 QRICH2Q9H0J4 1663 aa5.96□□□□□ -1.45
PDS5B-209ENST00000498550 PTPN23Q9H3S7 1636 aa5.96□□□□□ -1.46
PDS5B-209ENST00000498550 CDK13Q14004 1512 aaKnown RBP5.96□□□□□ -1.46
PDS5B-209ENST00000498550 ZNF518AQ6AHZ1 1483 aa5.96□□□□□ -1.46
PDS5B-209ENST00000498550 ABCA3Q99758 1704 aa5.96□□□□□ -1.46
PDS5B-209ENST00000498550 EFCAB6Q5THR3 1501 aa5.96□□□□□ -1.46
PDS5B-209ENST00000498550 EHMT2Q96KQ7 1210 aa5.95□□□□□ -1.46
PDS5B-209ENST00000498550 GPATCH8Q9UKJ3 1502 aaKnown RBP5.95□□□□□ -1.46
PDS5B-209ENST00000498550 PLCH2O75038 1416 aa5.95□□□□□ -1.46
PDS5B-209ENST00000498550 XRN1Q8IZH2 1706 aaKnown RBP5.94□□□□□ -1.46
PDS5B-209ENST00000498550 TNS1Q9HBL0 1735 aaKnown RBP5.94□□□□□ -1.46
PDS5B-209ENST00000498550 NRXN3Q9Y4C0 1643 aa5.94□□□□□ -1.46
PDS5B-209ENST00000498550 RGS17Q9UGC6 210 aaPredicted RBP5.94□□□□□ -1.46
PDS5B-209ENST00000498550 CARMIL2Q6F5E8 1435 aa5.93□□□□□ -1.46
PDS5B-209ENST00000498550 LRRC7Q96NW7 1537 aa5.93□□□□□ -1.46
PDS5B-209ENST00000498550 ROBO1Q9Y6N7 1651 aa5.93□□□□□ -1.46
PDS5B-209ENST00000498550 ATP7AQ04656 1500 aa5.92□□□□□ -1.46
PDS5B-209ENST00000498550 AKNAQ7Z591 1439 aa5.92□□□□□ -1.46
PDS5B-209ENST00000498550 LRP6O75581 1613 aa5.92□□□□□ -1.46
PDS5B-209ENST00000498550 TIAM1Q13009 1591 aa5.91□□□□□ -1.46
PDS5B-209ENST00000498550 BCL9LQ86UU0 1499 aa5.91□□□□□ -1.46
PDS5B-209ENST00000498550 KIF27Q86VH2 1401 aa5.91□□□□□ -1.46
PDS5B-209ENST00000498550 DENND4BO75064 1496 aaPredicted RBP5.91□□□□□ -1.46
PDS5B-209ENST00000498550 NCOA2Q15596 1464 aa5.91□□□□□ -1.46
PDS5B-209ENST00000498550 A2ML1A8K2U0 1454 aa5.9□□□□□ -1.46
PDS5B-209ENST00000498550 IQGAP3Q86VI3 1631 aa5.9□□□□□ -1.46
PDS5B-209ENST00000498550 TRAPPC8Q9Y2L5 1435 aa5.89□□□□□ -1.47
PDS5B-209ENST00000498550 LMTK2Q8IWU2 1503 aa5.89□□□□□ -1.47
PDS5B-209ENST00000498550 QSER1Q2KHR3 1735 aa5.89□□□□□ -1.47
PDS5B-209ENST00000498550 UNC13BO14795 1591 aa5.89□□□□□ -1.47
PDS5B-209ENST00000498550 CASZ1Q86V15 1759 aa5.89□□□□□ -1.47
PDS5B-209ENST00000498550 ARHGEF5Q12774 1597 aa5.89□□□□□ -1.47
PDS5B-209ENST00000498550 ABCC3O15438 1527 aa5.89□□□□□ -1.47
PDS5B-209ENST00000498550 PRDM15P57071 1507 aaPredicted RBP5.89□□□□□ -1.47
PDS5B-209ENST00000498550 NRAPQ86VF7 1730 aa5.88□□□□□ -1.47
PDS5B-209ENST00000498550 CNTLNQ9NXG0 1405 aa5.87□□□□□ -1.47
PDS5B-209ENST00000498550 BRWD3Q6RI45 1802 aa5.87□□□□□ -1.47
PDS5B-209ENST00000498550 USP32Q8NFA0 1604 aa5.87□□□□□ -1.47
PDS5B-209ENST00000498550 CARMIL1Q5VZK9 1371 aa5.87□□□□□ -1.47
PDS5B-209ENST00000498550 PZPP20742 1482 aa5.86□□□□□ -1.47
PDS5B-209ENST00000498550 SHANK2Q9UPX8 1470 aa5.85□□□□□ -1.47
PDS5B-209ENST00000498550 WNK3Q9BYP7 1800 aa5.85□□□□□ -1.47
PDS5B-209ENST00000498550 MYO5BQ9ULV0 1848 aa5.85□□□□□ -1.47
PDS5B-209ENST00000498550 MBD5Q9P267 1494 aa5.85□□□□□ -1.47
PDS5B-209ENST00000498550 EP400Q96L91 3159 aa5.85□□□□□ -1.47
PDS5B-209ENST00000498550 PHLPP1O60346 1717 aa5.85□□□□□ -1.47
PDS5B-209ENST00000498550 CEP152O94986 1710 aa5.84□□□□□ -1.48
PDS5B-209ENST00000498550 NALCNQ8IZF0 1738 aa5.84□□□□□ -1.48
PDS5B-209ENST00000498550 GCC2Q8IWJ2 1684 aa5.82□□□□□ -1.48
PDS5B-209ENST00000498550 FGD6Q6ZV73 1430 aa5.82□□□□□ -1.48
PDS5B-209ENST00000498550 NUP188Q5SRE5 1749 aa5.82□□□□□ -1.48
PDS5B-209ENST00000498550 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.81□□□□□ -1.48
PDS5B-209ENST00000498550 KIAA1107Q9UPP5 1409 aa5.81□□□□□ -1.48
PDS5B-209ENST00000498550 PEAK1Q9H792 1746 aa5.81□□□□□ -1.48
PDS5B-209ENST00000498550 KIF1AQ12756 1690 aa5.81□□□□□ -1.48
PDS5B-209ENST00000498550 THSD7AQ9UPZ6 1657 aa5.8□□□□□ -1.48
PDS5B-209ENST00000498550 NWD2Q9ULI1 1742 aa5.8□□□□□ -1.48
PDS5B-209ENST00000498550 FAM135BQ49AJ0 1406 aa5.8□□□□□ -1.48
PDS5B-209ENST00000498550 ADGRB3O60242 1522 aa5.8□□□□□ -1.48
PDS5B-209ENST00000498550 IFT172Q9UG01 1749 aa5.8□□□□□ -1.48
PDS5B-209ENST00000498550 UHRF1BP1Q6BDS2 1440 aa5.8□□□□□ -1.48
PDS5B-209ENST00000498550 TMEM131LA2VDJ0 1609 aa5.8□□□□□ -1.48
PDS5B-209ENST00000498550 FXR2P51116 673 aaKnown RBP eCLIP5.79□□□□□ -1.48
PDS5B-209ENST00000498550 SAMD1Q6SPF0 538 aaPredicted RBP5.79□□□□□ -1.48
PDS5B-209ENST00000498550 NLRP1Q9C000 1473 aa5.79□□□□□ -1.48
PDS5B-209ENST00000498550 RTEL1-TNFRSF6BF6WH68 1400 aa5.79□□□□□ -1.48
PDS5B-209ENST00000498550 POLA2Q14181 598 aa5.79□□□□□ -1.48
PDS5B-209ENST00000498550 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.78□□□□□ -1.48
PDS5B-209ENST00000498550 ARHGAP31Q2M1Z3 1444 aa5.78□□□□□ -1.48
PDS5B-209ENST00000498550 KNDC1Q76NI1 1749 aa5.78□□□□□ -1.48
PDS5B-209ENST00000498550 NKTRP30414 1462 aaKnown RBP5.78□□□□□ -1.48
PDS5B-209ENST00000498550 PLEKHH2Q8IVE3 1493 aa5.78□□□□□ -1.48
PDS5B-209ENST00000498550 NCOA3Q9Y6Q9 1424 aa5.77□□□□□ -1.49
PDS5B-209ENST00000498550 LRRC9Q6ZRR7 1453 aa5.76□□□□□ -1.49
PDS5B-209ENST00000498550 IFNLR1Q8IU57 520 aaPredicted RBP5.75□□□□□ -1.49
PDS5B-209ENST00000498550 SCAF11Q99590 1463 aaKnown RBP5.75□□□□□ -1.49
PDS5B-209ENST00000498550 RGPD1P0DJD0 1748 aa5.74□□□□□ -1.49
PDS5B-209ENST00000498550 SETBP1Q9Y6X0 1596 aa5.74□□□□□ -1.49
PDS5B-209ENST00000498550 EVX2Q03828 476 aa5.74□□□□□ -1.49
PDS5B-209ENST00000498550 CREBZFQ9NS37 354 aa5.74□□□□□ -1.49
PDS5B-209ENST00000498550 TRPM3Q9HCF6 1732 aaPredicted RBP5.74□□□□□ -1.49
PDS5B-209ENST00000498550 PAPPAQ13219 1627 aa5.73□□□□□ -1.49
PDS5B-209ENST00000498550 USP54Q70EL1 1684 aa5.73□□□□□ -1.49
PDS5B-209ENST00000498550 RRBP1Q9P2E9 1410 aaKnown RBP5.73□□□□□ -1.49
PDS5B-209ENST00000498550 PLCH1Q4KWH8 1693 aa5.73□□□□□ -1.49
PDS5B-209ENST00000498550 SBF2Q86WG5 1849 aa5.72□□□□□ -1.49
PDS5B-209ENST00000498550 TRPM1Q7Z4N2 1603 aa5.72□□□□□ -1.49
PDS5B-209ENST00000498550 ZFYVE9O95405 1425 aa5.72□□□□□ -1.49
PDS5B-209ENST00000498550 DISP3Q9P2K9 1392 aa5.71□□□□□ -1.5
PDS5B-209ENST00000498550 ARHGAP35Q9NRY4 1499 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms