RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 NYAP1Q6ZVC0 841 aa7.82□□□□□ -1.16
RBM39-242ENST00000498280 FBXW7Q969H0 707 aa7.82□□□□□ -1.16
RBM39-242ENST00000498280 MFSD10Q14728 455 aa7.81□□□□□ -1.16
RBM39-242ENST00000498280 PROX2Q3B8N5 592 aa7.81□□□□□ -1.16
RBM39-242ENST00000498280 LAPTM4BQ86VI4 370 aa7.81□□□□□ -1.16
RBM39-242ENST00000498280 TYW1BQ6NUM6 668 aa7.8□□□□□ -1.16
RBM39-242ENST00000498280 EMILIN3Q9NT22 766 aa7.8□□□□□ -1.16
RBM39-242ENST00000498280 PCDHGA10Q9Y5H3 936 aa7.8□□□□□ -1.16
RBM39-242ENST00000498280 PHF14O94880 888 aa7.79□□□□□ -1.16
RBM39-242ENST00000498280 SOWAHBA6NEL2 793 aa7.78□□□□□ -1.16
RBM39-242ENST00000498280 COL9A1P20849 921 aa7.77□□□□□ -1.17
RBM39-242ENST00000498280 KCNC4Q03721 635 aa7.76□□□□□ -1.17
RBM39-242ENST00000498280 ZFRQ96KR1 1074 aaKnown RBP7.76□□□□□ -1.17
RBM39-242ENST00000498280 WBP1LQ9NX94 342 aa7.76□□□□□ -1.17
RBM39-242ENST00000498280 ONECUT3O60422 494 aaPredicted RBP7.74□□□□□ -1.17
RBM39-242ENST00000498280 GFRA3O60609 400 aa7.74□□□□□ -1.17
RBM39-242ENST00000498280 TRAF7Q6Q0C0 670 aa7.74□□□□□ -1.17
RBM39-242ENST00000498280 EPAS1Q99814 870 aa7.74□□□□□ -1.17
RBM39-242ENST00000498280 KIAA1468Q9P260 1216 aa7.74□□□□□ -1.17
RBM39-242ENST00000498280 LAPTM4AQ15012 233 aa7.73□□□□□ -1.17
RBM39-242ENST00000498280 FAM98CQ17RN3 349 aaKnown RBP7.72□□□□□ -1.17
RBM39-242ENST00000498280 SEPT9Q9UHD8 586 aaPredicted RBP7.72□□□□□ -1.17
RBM39-242ENST00000498280 TRIM6-TRIM34B2RNG4 842 aa7.71□□□□□ -1.18
RBM39-242ENST00000498280 LRCH3Q96II8 777 aa7.71□□□□□ -1.18
RBM39-242ENST00000498280 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.7□□□□□ -1.18
RBM39-242ENST00000498280 TSR3Q9UJK0 312 aaKnown RBP7.7□□□□□ -1.18
RBM39-242ENST00000498280 C6orf132Q5T0Z8 1188 aa7.69□□□□□ -1.18
RBM39-242ENST00000498280 HPS5Q9UPZ3 1129 aa7.68□□□□□ -1.18
RBM39-242ENST00000498280 DPYSL4O14531 572 aa7.67□□□□□ -1.18
RBM39-242ENST00000498280 RBM33Q96EV2 1170 aaKnown RBP7.66□□□□□ -1.18
RBM39-242ENST00000498280 CAMK2BQ13554 666 aa7.65□□□□□ -1.18
RBM39-242ENST00000498280 PRKD2Q9BZL6 878 aa7.65□□□□□ -1.18
RBM39-242ENST00000498280 NRG2O14511 850 aaPredicted RBP7.64□□□□□ -1.19
RBM39-242ENST00000498280 PACS2Q86VP3 889 aa7.64□□□□□ -1.19
RBM39-242ENST00000498280 MAP3K7O43318 606 aa7.63□□□□□ -1.19
RBM39-242ENST00000498280 NBR1Q14596 966 aa7.63□□□□□ -1.19
RBM39-242ENST00000498280 BBXQ8WY36 941 aaPredicted RBP7.63□□□□□ -1.19
RBM39-242ENST00000498280 DDX12PQ92771 950 aa7.63□□□□□ -1.19
RBM39-242ENST00000498280 RTN4Q9NQC3 1192 aaKnown RBP7.63□□□□□ -1.19
RBM39-242ENST00000498280 PPP4CP60510 307 aa7.62□□□□□ -1.19
RBM39-242ENST00000498280 EN1Q05925 392 aaPredicted RBP7.62□□□□□ -1.19
RBM39-242ENST00000498280 ZNF787Q6DD87 383 aa7.61□□□□□ -1.19
RBM39-242ENST00000498280 TJAP1Q5JTD0 557 aa7.59□□□□□ -1.19
RBM39-242ENST00000498280 TSKSQ9UJT2 592 aa7.59□□□□□ -1.19
RBM39-242ENST00000498280 NBPF26B4DH59 902 aa7.58□□□□□ -1.2
RBM39-242ENST00000498280 TSR1Q2NL82 804 aaKnown RBP7.58□□□□□ -1.2
RBM39-242ENST00000498280 ZNF775Q96BV0 537 aaPredicted RBP7.58□□□□□ -1.2
RBM39-242ENST00000498280 PRIM1P49642 420 aaKnown RBP7.57□□□□□ -1.2
RBM39-242ENST00000498280 PDIA6Q15084 440 aa7.57□□□□□ -1.2
RBM39-242ENST00000498280 PPP1R18Q6NYC8 613 aa7.57□□□□□ -1.2
RBM39-242ENST00000498280 CERKQ8TCT0 537 aa7.57□□□□□ -1.2
RBM39-242ENST00000498280 SAMD7Q7Z3H4 446 aa7.56□□□□□ -1.2
RBM39-242ENST00000498280 SPRYD3Q8NCJ5 442 aa7.56□□□□□ -1.2
RBM39-242ENST00000498280 IL21Q9HBE4 155 aa7.56□□□□□ -1.2
RBM39-242ENST00000498280 V9GY48 417 aaPredicted RBP7.56□□□□□ -1.2
RBM39-242ENST00000498280 SPDYE16A6NNV3 312 aaPredicted RBP7.55□□□□□ -1.2
RBM39-242ENST00000498280 PAXIP1Q6ZW49 1069 aaPredicted RBP7.55□□□□□ -1.2
RBM39-242ENST00000498280 CDCA7LQ96GN5 454 aa7.55□□□□□ -1.2
RBM39-242ENST00000498280 MTRQ99707 1265 aa7.55□□□□□ -1.2
RBM39-242ENST00000498280 PDZRN3Q9UPQ7 1066 aa7.55□□□□□ -1.2
RBM39-242ENST00000498280 RNF40O75150 1001 aa7.54□□□□□ -1.2
RBM39-242ENST00000498280 PRSS12P56730 875 aa7.54□□□□□ -1.2
RBM39-242ENST00000498280 NECTIN2Q92692 538 aa7.54□□□□□ -1.2
RBM39-242ENST00000498280 CFAP44Q96MT7 982 aa7.54□□□□□ -1.2
RBM39-242ENST00000498280 ZNF516Q92618 1163 aa7.53□□□□□ -1.2
RBM39-242ENST00000498280 HDGFP51858 240 aaKnown RBP7.52□□□□□ -1.21
RBM39-242ENST00000498280 PNMA3Q9UL41 463 aa7.52□□□□□ -1.21
RBM39-242ENST00000498280 C3orf80F5H4A9 247 aa7.51□□□□□ -1.21
RBM39-242ENST00000498280 SMAPO00193 183 aa7.51□□□□□ -1.21
RBM39-242ENST00000498280 GGCXP38435 758 aa7.51□□□□□ -1.21
RBM39-242ENST00000498280 AMER1Q5JTC6 1135 aaPredicted RBP7.51□□□□□ -1.21
RBM39-242ENST00000498280 TATDN2Q93075 761 aa7.51□□□□□ -1.21
RBM39-242ENST00000498280 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.51□□□□□ -1.21
RBM39-242ENST00000498280 RBM27Q9P2N5 1060 aaKnown RBP7.5□□□□□ -1.21
RBM39-242ENST00000498280 FAM198AQ9UFP1 575 aa7.5□□□□□ -1.21
RBM39-242ENST00000498280 SLC4A3P48751 1232 aa7.49□□□□□ -1.21
RBM39-242ENST00000498280 NKX2-3Q8TAU0 364 aa7.49□□□□□ -1.21
RBM39-242ENST00000498280 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.49□□□□□ -1.21
RBM39-242ENST00000498280 GRXCR2A6NFK2 248 aa7.48□□□□□ -1.21
RBM39-242ENST00000498280 E2F4Q16254 413 aa7.48□□□□□ -1.21
RBM39-242ENST00000498280 APLP1P51693 650 aa7.46□□□□□ -1.22
RBM39-242ENST00000498280 NUDT18Q6ZVK8 323 aa7.46□□□□□ -1.22
RBM39-242ENST00000498280 SLF2Q8IX21 1173 aa7.46□□□□□ -1.22
RBM39-242ENST00000498280 CDHR5Q9HBB8 845 aa7.46□□□□□ -1.22
RBM39-242ENST00000498280 POTECB2RU33 542 aa7.44□□□□□ -1.22
RBM39-242ENST00000498280 OSBPP22059 807 aa7.44□□□□□ -1.22
RBM39-242ENST00000498280 PRR14Q9BWN1 585 aa7.44□□□□□ -1.22
RBM39-242ENST00000498280 ARIH1Q9Y4X5 557 aaPredicted RBP7.44□□□□□ -1.22
RBM39-242ENST00000498280 COPS2P61201 443 aa7.43□□□□□ -1.22
RBM39-242ENST00000498280 TRIM67Q6ZTA4 783 aa7.43□□□□□ -1.22
RBM39-242ENST00000498280 TMUB1Q9BVT8 246 aa7.43□□□□□ -1.22
RBM39-242ENST00000498280 TSHZ2Q9NRE2 1034 aa7.43□□□□□ -1.22
RBM39-242ENST00000498280 SWT1Q5T5J6 900 aaKnown RBP7.41□□□□□ -1.22
RBM39-242ENST00000498280 WDR70Q9NW82 654 aa7.41□□□□□ -1.22
RBM39-242ENST00000498280 MYT1Q01538 1121 aa7.4□□□□□ -1.22
RBM39-242ENST00000498280 PADI6Q6TGC4 694 aa7.4□□□□□ -1.22
RBM39-242ENST00000498280 PKDCCQ504Y2 493 aa7.39□□□□□ -1.23
RBM39-242ENST00000498280 ZPR1O75312 459 aa7.38□□□□□ -1.23
RBM39-242ENST00000498280 NPDC1Q9NQX5 325 aaPredicted RBP7.38□□□□□ -1.23
RBM39-242ENST00000498280 PCDHB3Q9Y5E6 796 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms