RNA–Protein interactions for RNA: ENST00000497845.1

POLR2B-211, Transcript of RNA polymerase II subunit B, humanhuman

TSL 4

Gene POLR2B, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-211ENST00000497845 IGF1RP08069 1367 aa10.72□□□□□ -0.69
POLR2B-211ENST00000497845 NEO1Q92859 1461 aa10.72□□□□□ -0.69
POLR2B-211ENST00000497845 IQGAP2Q13576 1575 aa10.72□□□□□ -0.69
POLR2B-211ENST00000497845 SIGLEC1Q9BZZ2 1709 aa10.71□□□□□ -0.69
POLR2B-211ENST00000497845 NCOA1Q15788 1441 aa10.7□□□□□ -0.7
POLR2B-211ENST00000497845 SNPHO15079 494 aa10.7□□□□□ -0.7
POLR2B-211ENST00000497845 MAP3K13O43283 966 aa10.68□□□□□ -0.7
POLR2B-211ENST00000497845 TOM1O60784 492 aa10.68□□□□□ -0.7
POLR2B-211ENST00000497845 ARHGEF12Q9NZN5 1544 aa10.68□□□□□ -0.7
POLR2B-211ENST00000497845 TRIM35Q9UPQ4 493 aa10.67□□□□□ -0.7
POLR2B-211ENST00000497845 DENND4BO75064 1496 aaPredicted RBP10.67□□□□□ -0.7
POLR2B-211ENST00000497845 POTEAQ6S8J7 498 aa10.66□□□□□ -0.7
POLR2B-211ENST00000497845 ZFYVE16Q7Z3T8 1539 aa10.64□□□□□ -0.71
POLR2B-211ENST00000497845 NCKAP5LQ9HCH0 1330 aa10.64□□□□□ -0.71
POLR2B-211ENST00000497845 POTEB3A0JP26 581 aa10.64□□□□□ -0.71
POLR2B-211ENST00000497845 ARID3CA6NKF2 412 aa10.64□□□□□ -0.71
POLR2B-211ENST00000497845 EMP3P54852 163 aa10.64□□□□□ -0.71
POLR2B-211ENST00000497845 POTEBQ6S5H4 581 aa10.64□□□□□ -0.71
POLR2B-211ENST00000497845 KIAA0556O60303 1618 aa10.64□□□□□ -0.71
POLR2B-211ENST00000497845 ABCA9Q8IUA7 1624 aa10.64□□□□□ -0.71
POLR2B-211ENST00000497845 FHOD3Q2V2M9 1422 aa10.64□□□□□ -0.71
POLR2B-211ENST00000497845 CARMIL1Q5VZK9 1371 aa10.63□□□□□ -0.71
POLR2B-211ENST00000497845 EFCAB5A4FU69 1503 aa10.62□□□□□ -0.71
POLR2B-211ENST00000497845 UGGT2Q9NYU1 1516 aa10.62□□□□□ -0.71
POLR2B-211ENST00000497845 RICTORQ6R327 1708 aa10.61□□□□□ -0.71
POLR2B-211ENST00000497845 HS3ST6Q96QI5 342 aa10.61□□□□□ -0.71
POLR2B-211ENST00000497845 ABCA8O94911 1581 aa10.6□□□□□ -0.71
POLR2B-211ENST00000497845 CAMSAP1Q5T5Y3 1602 aa10.6□□□□□ -0.71
POLR2B-211ENST00000497845 ZMYM4Q5VZL5 1548 aa10.59□□□□□ -0.71
POLR2B-211ENST00000497845 SETD1AO15047 1707 aaKnown RBP10.59□□□□□ -0.71
POLR2B-211ENST00000497845 UPF1Q92900 1129 aaKnown RBP eCLIP10.59□□□□□ -0.71
POLR2B-211ENST00000497845 KIF27Q86VH2 1401 aa10.58□□□□□ -0.72
POLR2B-211ENST00000497845 MAGI2Q86UL8 1455 aa10.58□□□□□ -0.72
POLR2B-211ENST00000497845 TRAPPC8Q9Y2L5 1435 aa10.58□□□□□ -0.72
POLR2B-211ENST00000497845 PLCG2P16885 1265 aa10.57□□□□□ -0.72
POLR2B-211ENST00000497845 SETD1BQ9UPS6 1966 aaKnown RBP10.57□□□□□ -0.72
POLR2B-211ENST00000497845 FAM205CA6NFA0 338 aa10.56□□□□□ -0.72
POLR2B-211ENST00000497845 ATP10AO60312 1499 aa10.55□□□□□ -0.72
POLR2B-211ENST00000497845 ATP10BO94823 1461 aa10.55□□□□□ -0.72
POLR2B-211ENST00000497845 C9orf84Q5VXU9 1444 aa10.54□□□□□ -0.72
POLR2B-211ENST00000497845 HECW1Q76N89 1606 aa10.54□□□□□ -0.72
POLR2B-211ENST00000497845 PTPRKQ15262 1439 aa10.53□□□□□ -0.72
POLR2B-211ENST00000497845 PKD2Q13563 968 aa10.53□□□□□ -0.72
POLR2B-211ENST00000497845 ALKQ9UM73 1620 aa10.52□□□□□ -0.73
POLR2B-211ENST00000497845 RNF166Q96A37 237 aaPredicted RBP10.52□□□□□ -0.73
POLR2B-211ENST00000497845 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.52□□□□□ -0.73
POLR2B-211ENST00000497845 C3P01024 1663 aa10.52□□□□□ -0.73
POLR2B-211ENST00000497845 CPS1P31327 1500 aa10.5□□□□□ -0.73
POLR2B-211ENST00000497845 ESF1Q9H501 851 aaKnown RBP10.5□□□□□ -0.73
POLR2B-211ENST00000497845 IRX5P78411 483 aaPredicted RBP10.48□□□□□ -0.73
POLR2B-211ENST00000497845 TCOF1Q13428 1488 aaKnown RBP10.48□□□□□ -0.73
POLR2B-211ENST00000497845 PLA2R1Q13018 1463 aa10.47□□□□□ -0.73
POLR2B-211ENST00000497845 SHANK2Q9UPX8 1470 aa10.47□□□□□ -0.73
POLR2B-211ENST00000497845 GOLGA3Q08378 1498 aa10.46□□□□□ -0.74
POLR2B-211ENST00000497845 RAPGEF2Q9Y4G8 1499 aa10.46□□□□□ -0.74
POLR2B-211ENST00000497845 CFAP74Q9C0B2 1584 aa10.46□□□□□ -0.74
POLR2B-211ENST00000497845 SCAPERQ9BY12 1400 aa10.45□□□□□ -0.74
POLR2B-211ENST00000497845 TRIM52Q96A61 297 aa10.43□□□□□ -0.74
POLR2B-211ENST00000497845 NPATQ14207 1427 aa10.42□□□□□ -0.74
POLR2B-211ENST00000497845 SPDYE4A6NLX3 237 aa10.42□□□□□ -0.74
POLR2B-211ENST00000497845 IFFO2Q5TF58 517 aa10.42□□□□□ -0.74
POLR2B-211ENST00000497845 FAM9AQ8IZU1 332 aaPredicted RBP10.41□□□□□ -0.74
POLR2B-211ENST00000497845 PCDHB13Q9Y5F0 798 aa10.41□□□□□ -0.74
POLR2B-211ENST00000497845 SGIP1Q9BQI5 828 aa10.4□□□□□ -0.74
POLR2B-211ENST00000497845 TMEM106CQ9BVX2 250 aa10.4□□□□□ -0.74
POLR2B-211ENST00000497845 OCEL1Q9H607 264 aa10.4□□□□□ -0.74
POLR2B-211ENST00000497845 RASEFQ8IZ41 740 aa10.39□□□□□ -0.75
POLR2B-211ENST00000497845 MYT1LQ9UL68 1186 aa10.39□□□□□ -0.75
POLR2B-211ENST00000497845 CNTLNQ9NXG0 1405 aa10.39□□□□□ -0.75
POLR2B-211ENST00000497845 P3H3Q8IVL6 736 aa10.38□□□□□ -0.75
POLR2B-211ENST00000497845 AGLP35573 1532 aa10.37□□□□□ -0.75
POLR2B-211ENST00000497845 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.37□□□□□ -0.75
POLR2B-211ENST00000497845 CEP170BQ9Y4F5 1589 aaPredicted RBP10.36□□□□□ -0.75
POLR2B-211ENST00000497845 ZMYM3Q14202 1370 aa10.36□□□□□ -0.75
POLR2B-211ENST00000497845 VWDEQ8N2E2 1590 aa10.35□□□□□ -0.75
POLR2B-211ENST00000497845 ZNF142P52746 1687 aaPredicted RBP10.35□□□□□ -0.75
POLR2B-211ENST00000497845 LRRC7Q96NW7 1537 aa10.35□□□□□ -0.75
POLR2B-211ENST00000497845 PLEKHD1A6NEE1 506 aa10.35□□□□□ -0.75
POLR2B-211ENST00000497845 MYO3AQ8NEV4 1616 aa10.35□□□□□ -0.75
POLR2B-211ENST00000497845 AFAP1Q8N556 730 aa10.34□□□□□ -0.75
POLR2B-211ENST00000497845 RBM33Q96EV2 1170 aaKnown RBP10.34□□□□□ -0.75
POLR2B-211ENST00000497845 DIP2CQ9Y2E4 1556 aa10.34□□□□□ -0.75
POLR2B-211ENST00000497845 RNF17Q9BXT8 1623 aaKnown RBP10.33□□□□□ -0.76
POLR2B-211ENST00000497845 SUPT6HQ7KZ85 1726 aaKnown RBP10.33□□□□□ -0.76
POLR2B-211ENST00000497845 IFNL1Q8IU54 200 aa10.33□□□□□ -0.76
POLR2B-211ENST00000497845 REREQ9P2R6 1566 aa10.33□□□□□ -0.76
POLR2B-211ENST00000497845 NEURL4Q96JN8 1562 aa10.32□□□□□ -0.76
POLR2B-211ENST00000497845 SETBP1Q9Y6X0 1596 aa10.32□□□□□ -0.76
POLR2B-211ENST00000497845 ZNF518AQ6AHZ1 1483 aa10.31□□□□□ -0.76
POLR2B-211ENST00000497845 PLCH2O75038 1416 aa10.3□□□□□ -0.76
POLR2B-211ENST00000497845 NUP153P49790 1475 aaKnown RBP10.3□□□□□ -0.76
POLR2B-211ENST00000497845 RAPGEF6Q8TEU7 1601 aa10.29□□□□□ -0.76
POLR2B-211ENST00000497845 RXRBP28702 533 aa10.29□□□□□ -0.76
POLR2B-211ENST00000497845 ZNF772Q68DY9 489 aaPredicted RBP10.29□□□□□ -0.76
POLR2B-211ENST00000497845 MROH2AA6NES4 1674 aa10.28□□□□□ -0.76
POLR2B-211ENST00000497845 CTTNBP2Q8WZ74 1663 aa10.28□□□□□ -0.76
POLR2B-211ENST00000497845 FAM135BQ49AJ0 1406 aa10.28□□□□□ -0.76
POLR2B-211ENST00000497845 EFCAB2Q5VUJ9 269 aa10.28□□□□□ -0.76
POLR2B-211ENST00000497845 ABCA6Q8N139 1617 aa10.28□□□□□ -0.76
POLR2B-211ENST00000497845 KDM5CP41229 1560 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms