RNA–Protein interactions for RNA: ENST00000497730.1

TRA2A-210, Transcript of transformer 2 alpha homolog, humanhuman

TSL 3

Gene TRA2A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-210ENST00000497730 BARGINQ6ZT62 677 aa12.8□□□□□ -0.36
TRA2A-210ENST00000497730 PSDA5PKW4 1024 aaPredicted RBP12.79□□□□□ -0.36
TRA2A-210ENST00000497730 KRI1Q8N9T8 703 aaKnown RBP12.78□□□□□ -0.36
TRA2A-210ENST00000497730 ADAM33Q9BZ11 813 aa12.78□□□□□ -0.36
TRA2A-210ENST00000497730 PTGDRQ13258 359 aa12.77□□□□□ -0.37
TRA2A-210ENST00000497730 SLC24A3Q9HC58 644 aa12.77□□□□□ -0.37
TRA2A-210ENST00000497730 MARVELD3Q96A59 401 aa12.76□□□□□ -0.37
TRA2A-210ENST00000497730 HIC1Q14526 733 aa12.75□□□□□ -0.37
TRA2A-210ENST00000497730 C6orf132Q5T0Z8 1188 aa12.75□□□□□ -0.37
TRA2A-210ENST00000497730 ERBB3P21860 1342 aa12.74□□□□□ -0.37
TRA2A-210ENST00000497730 GNPATO15228 680 aa12.74□□□□□ -0.37
TRA2A-210ENST00000497730 EMP3P54852 163 aa12.74□□□□□ -0.37
TRA2A-210ENST00000497730 MMRN1Q13201 1228 aa12.74□□□□□ -0.37
TRA2A-210ENST00000497730 SPNS2Q8IVW8 549 aa12.72□□□□□ -0.37
TRA2A-210ENST00000497730 NPDC1Q9NQX5 325 aaPredicted RBP12.72□□□□□ -0.37
TRA2A-210ENST00000497730 FECHP22830 423 aa12.71□□□□□ -0.37
TRA2A-210ENST00000497730 BCL2L12Q9HB09 334 aa12.71□□□□□ -0.37
TRA2A-210ENST00000497730 VARS2Q5ST30 1063 aaKnown RBP12.7□□□□□ -0.38
TRA2A-210ENST00000497730 PTPREP23469 700 aa12.68□□□□□ -0.38
TRA2A-210ENST00000497730 MAP2K5Q13163 448 aa12.67□□□□□ -0.38
TRA2A-210ENST00000497730 CERKQ8TCT0 537 aa12.67□□□□□ -0.38
TRA2A-210ENST00000497730 AK7Q96M32 723 aa12.67□□□□□ -0.38
TRA2A-210ENST00000497730 MINK1Q8N4C8 1332 aaPredicted RBP12.66□□□□□ -0.38
TRA2A-210ENST00000497730 FAM205CA6NFA0 338 aa12.66□□□□□ -0.38
TRA2A-210ENST00000497730 KCNK17Q96T54 332 aa12.66□□□□□ -0.38
TRA2A-210ENST00000497730 COL9A1P20849 921 aa12.65□□□□□ -0.38
TRA2A-210ENST00000497730 IRF6O14896 467 aa12.64□□□□□ -0.39
TRA2A-210ENST00000497730 PADI6Q6TGC4 694 aa12.63□□□□□ -0.39
TRA2A-210ENST00000497730 CCDC102AQ96A19 550 aa12.63□□□□□ -0.39
TRA2A-210ENST00000497730 KCNH8Q96L42 1107 aa12.63□□□□□ -0.39
TRA2A-210ENST00000497730 PPP1R3GB7ZBB8 358 aa12.62□□□□□ -0.39
TRA2A-210ENST00000497730 POTEB3A0JP26 581 aa12.61□□□□□ -0.39
TRA2A-210ENST00000497730 POTEBQ6S5H4 581 aa12.61□□□□□ -0.39
TRA2A-210ENST00000497730 TRIM66O15016 1216 aa12.6□□□□□ -0.39
TRA2A-210ENST00000497730 PRSS12P56730 875 aa12.6□□□□□ -0.39
TRA2A-210ENST00000497730 CDCA7LQ96GN5 454 aa12.6□□□□□ -0.39
TRA2A-210ENST00000497730 PSEN2P49810 448 aa12.58□□□□□ -0.4
TRA2A-210ENST00000497730 HS3ST6Q96QI5 342 aa12.58□□□□□ -0.4
TRA2A-210ENST00000497730 BRPF1P55201 1214 aaPredicted RBP12.57□□□□□ -0.4
TRA2A-210ENST00000497730 NEUROD2Q15784 382 aa12.57□□□□□ -0.4
TRA2A-210ENST00000497730 FAM161AQ3B820 660 aa12.57□□□□□ -0.4
TRA2A-210ENST00000497730 RBM27Q9P2N5 1060 aaKnown RBP12.57□□□□□ -0.4
TRA2A-210ENST00000497730 AXIN2Q9Y2T1 843 aa12.57□□□□□ -0.4
TRA2A-210ENST00000497730 ARHGAP33O14559 1287 aa12.55□□□□□ -0.4
TRA2A-210ENST00000497730 ZNF687Q8N1G0 1237 aa12.55□□□□□ -0.4
TRA2A-210ENST00000497730 TTC13Q8NBP0 860 aa12.55□□□□□ -0.4
TRA2A-210ENST00000497730 POTEEQ6S8J3 1075 aa12.54□□□□□ -0.4
TRA2A-210ENST00000497730 PDE4DQ08499 809 aa12.53□□□□□ -0.4
TRA2A-210ENST00000497730 PROX2Q3B8N5 592 aa12.53□□□□□ -0.4
TRA2A-210ENST00000497730 TSKSQ9UJT2 592 aa12.53□□□□□ -0.4
TRA2A-210ENST00000497730 ADGRG1Q9Y653 693 aa12.53□□□□□ -0.4
TRA2A-210ENST00000497730 TRIM6-TRIM34B2RNG4 842 aa12.52□□□□□ -0.41
TRA2A-210ENST00000497730 PBX2P40425 430 aa12.52□□□□□ -0.41
TRA2A-210ENST00000497730 KRTAP3-3Q9BYR6 98 aa12.52□□□□□ -0.41
TRA2A-210ENST00000497730 KRTAP3-2Q9BYR7 98 aa12.52□□□□□ -0.41
TRA2A-210ENST00000497730 FAM198AQ9UFP1 575 aa12.52□□□□□ -0.41
TRA2A-210ENST00000497730 DMRTA1Q5VZB9 504 aa12.51□□□□□ -0.41
TRA2A-210ENST00000497730 OATP04181 439 aa12.5□□□□□ -0.41
TRA2A-210ENST00000497730 TTLL12Q14166 644 aaPredicted RBP12.49□□□□□ -0.41
TRA2A-210ENST00000497730 METTL3Q86U44 580 aaKnown RBP12.49□□□□□ -0.41
TRA2A-210ENST00000497730 PACS2Q86VP3 889 aa12.49□□□□□ -0.41
TRA2A-210ENST00000497730 ZBED2Q9BTP6 218 aa12.49□□□□□ -0.41
TRA2A-210ENST00000497730 GPBP1L1Q9HC44 474 aaPredicted RBP12.49□□□□□ -0.41
TRA2A-210ENST00000497730 AMHR2Q16671 573 aa12.48□□□□□ -0.41
TRA2A-210ENST00000497730 PHOX2BQ99453 314 aa12.48□□□□□ -0.41
TRA2A-210ENST00000497730 RBM46Q8TBY0 533 aaKnown RBP12.47□□□□□ -0.41
TRA2A-210ENST00000497730 NBPF26B4DH59 902 aa12.46□□□□□ -0.41
TRA2A-210ENST00000497730 NUDT18Q6ZVK8 323 aa12.46□□□□□ -0.41
TRA2A-210ENST00000497730 PXYLP1Q8TE99 480 aa12.46□□□□□ -0.41
TRA2A-210ENST00000497730 C3orf80F5H4A9 247 aa12.45□□□□□ -0.42
TRA2A-210ENST00000497730 NLRP7Q8WX94 980 aa12.45□□□□□ -0.42
TRA2A-210ENST00000497730 TATDN2Q93075 761 aa12.45□□□□□ -0.42
TRA2A-210ENST00000497730 KIAA1468Q9P260 1216 aa12.45□□□□□ -0.42
TRA2A-210ENST00000497730 PNMA3Q9UL41 463 aa12.45□□□□□ -0.42
TRA2A-210ENST00000497730 MDM2Q00987 491 aaPredicted RBP12.44□□□□□ -0.42
TRA2A-210ENST00000497730 PARP9Q8IXQ6 854 aa12.44□□□□□ -0.42
TRA2A-210ENST00000497730 KDM4CQ9H3R0 1056 aa12.44□□□□□ -0.42
TRA2A-210ENST00000497730 SMAPO00193 183 aa12.43□□□□□ -0.42
TRA2A-210ENST00000497730 ONECUT3O60422 494 aaPredicted RBP12.43□□□□□ -0.42
TRA2A-210ENST00000497730 EYA1Q99502 592 aa12.42□□□□□ -0.42
TRA2A-210ENST00000497730 SLC4A5Q9BY07 1137 aa12.42□□□□□ -0.42
TRA2A-210ENST00000497730 VPS9D1Q9Y2B5 631 aa12.42□□□□□ -0.42
TRA2A-210ENST00000497730 RABGEF1Q9UJ41 708 aa12.41□□□□□ -0.42
TRA2A-210ENST00000497730 LSM11P83369 360 aaKnown RBP eCLIP12.4□□□□□ -0.42
TRA2A-210ENST00000497730 RCCD1A6NED2 376 aa12.39□□□□□ -0.43
TRA2A-210ENST00000497730 CLCN1P35523 988 aa12.39□□□□□ -0.43
TRA2A-210ENST00000497730 GIGYF2Q6Y7W6 1299 aaKnown RBP12.39□□□□□ -0.43
TRA2A-210ENST00000497730 REPIN1Q9BWE0 567 aaKnown RBP12.39□□□□□ -0.43
TRA2A-210ENST00000497730 GPCPD1Q9NPB8 672 aa12.38□□□□□ -0.43
TRA2A-210ENST00000497730 SEPT9Q9UHD8 586 aaPredicted RBP12.38□□□□□ -0.43
TRA2A-210ENST00000497730 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.37□□□□□ -0.43
TRA2A-210ENST00000497730 ANKRD13DQ6ZTN6 518 aa12.37□□□□□ -0.43
TRA2A-210ENST00000497730 TK2O00142 265 aa12.35□□□□□ -0.43
TRA2A-210ENST00000497730 DNAJB2P25686 324 aa12.35□□□□□ -0.43
TRA2A-210ENST00000497730 ADGRD1Q6QNK2 874 aa12.35□□□□□ -0.43
TRA2A-210ENST00000497730 TMUB1Q9BVT8 246 aa12.34□□□□□ -0.43
TRA2A-210ENST00000497730 NBPF3Q9H094 633 aa12.34□□□□□ -0.43
TRA2A-210ENST00000497730 IL27Q8NEV9 243 aa12.33□□□□□ -0.44
TRA2A-210ENST00000497730 FAM117AQ9C073 453 aa12.32□□□□□ -0.44
TRA2A-210ENST00000497730 MS4A1P11836 297 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms