RNA–Protein interactions for RNA: ENST00000497658.5

PHC3-217, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 2,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-217ENST00000497658 PHLDB1Q86UU1 1377 aa7.87□□□□□ -1.15
PHC3-217ENST00000497658 CFTRP13569 1480 aa7.87□□□□□ -1.15
PHC3-217ENST00000497658 SIN3AQ96ST3 1273 aa7.87□□□□□ -1.15
PHC3-217ENST00000497658 CFAP43Q8NDM7 1665 aa7.85□□□□□ -1.15
PHC3-217ENST00000497658 IGF1RP08069 1367 aa7.85□□□□□ -1.15
PHC3-217ENST00000497658 FAM50AQ14320 339 aaKnown RBP7.84□□□□□ -1.15
PHC3-217ENST00000497658 ERICH6Q7L0X2 663 aa7.84□□□□□ -1.15
PHC3-217ENST00000497658 TONSLQ96HA7 1378 aa7.84□□□□□ -1.15
PHC3-217ENST00000497658 ANKRD13DQ6ZTN6 518 aa7.83□□□□□ -1.16
PHC3-217ENST00000497658 AQRO60306 1485 aaKnown RBP eCLIP7.82□□□□□ -1.161e-7■■■■■ 32.3
PHC3-217ENST00000497658 CARMIL1Q5VZK9 1371 aa7.82□□□□□ -1.16
PHC3-217ENST00000497658 IFNLR1Q8IU57 520 aaPredicted RBP7.82□□□□□ -1.16
PHC3-217ENST00000497658 FYCO1Q9BQS8 1478 aa7.82□□□□□ -1.16
PHC3-217ENST00000497658 UACAQ9BZF9 1416 aa7.82□□□□□ -1.16
PHC3-217ENST00000497658 ARSIQ5FYB1 569 aa7.82□□□□□ -1.16
PHC3-217ENST00000497658 PPP4R2Q9NY27 417 aa7.81□□□□□ -1.16
PHC3-217ENST00000497658 HFM1A2PYH4 1435 aa7.81□□□□□ -1.16
PHC3-217ENST00000497658 HNRNPUQ00839 825 aaKnown RBP eCLIP7.8□□□□□ -1.16
PHC3-217ENST00000497658 EFCAB5A4FU69 1503 aa7.8□□□□□ -1.16
PHC3-217ENST00000497658 CASKIN1Q8WXD9 1431 aa7.8□□□□□ -1.16
PHC3-217ENST00000497658 FGD5Q6ZNL6 1462 aa7.79□□□□□ -1.16
PHC3-217ENST00000497658 SOX12O15370 315 aa7.79□□□□□ -1.16
PHC3-217ENST00000497658 PRDM2Q13029 1718 aa7.79□□□□□ -1.16
PHC3-217ENST00000497658 LSM11P83369 360 aaKnown RBP eCLIP7.79□□□□□ -1.16
PHC3-217ENST00000497658 MS4A4AQ96JQ5 239 aa7.79□□□□□ -1.16
PHC3-217ENST00000497658 PCF11O94913 1555 aaKnown RBP7.78□□□□□ -1.16
PHC3-217ENST00000497658 CCDC18Q5T9S5 1454 aa7.78□□□□□ -1.16
PHC3-217ENST00000497658 FGD6Q6ZV73 1430 aa7.78□□□□□ -1.16
PHC3-217ENST00000497658 HIRIP3Q9BW71 556 aaPredicted RBP7.77□□□□□ -1.17
PHC3-217ENST00000497658 KHSRPQ92945 711 aaKnown RBP eCLIP7.77□□□□□ -1.173e-11■■■■■ 30
PHC3-217ENST00000497658 FMN1Q68DA7 1419 aa7.76□□□□□ -1.17
PHC3-217ENST00000497658 NCOA2Q15596 1464 aa7.75□□□□□ -1.17
PHC3-217ENST00000497658 PTPN23Q9H3S7 1636 aa7.75□□□□□ -1.17
PHC3-217ENST00000497658 ZBED9Q6R2W3 1325 aa7.75□□□□□ -1.17
PHC3-217ENST00000497658 KDM5BQ9UGL1 1544 aa7.74□□□□□ -1.17
PHC3-217ENST00000497658 EIF4G2P78344 907 aaKnown RBP eCLIP7.74□□□□□ -1.17
PHC3-217ENST00000497658 PLA2G2EQ9NZK7 142 aa7.74□□□□□ -1.17
PHC3-217ENST00000497658 PHF8Q9UPP1 1060 aa7.74□□□□□ -1.17
PHC3-217ENST00000497658 NAIPQ13075 1403 aa7.74□□□□□ -1.17
PHC3-217ENST00000497658 WASHC2AQ641Q2 1341 aa7.73□□□□□ -1.17
PHC3-217ENST00000497658 CNTLNQ9NXG0 1405 aa7.73□□□□□ -1.17
PHC3-217ENST00000497658 PBX2P40425 430 aa7.72□□□□□ -1.17
PHC3-217ENST00000497658 CADPSQ9ULU8 1353 aa7.72□□□□□ -1.17
PHC3-217ENST00000497658 MTUS2Q5JR59 1369 aa7.71□□□□□ -1.17
PHC3-217ENST00000497658 FHOD3Q2V2M9 1422 aa7.71□□□□□ -1.17
PHC3-217ENST00000497658 MYOM3Q5VTT5 1437 aa7.71□□□□□ -1.17
PHC3-217ENST00000497658 AKNAQ7Z591 1439 aa7.71□□□□□ -1.17
PHC3-217ENST00000497658 DEKP35659 375 aaKnown RBP7.71□□□□□ -1.17
PHC3-217ENST00000497658 PRKRIP1Q9H875 184 aaPredicted RBP7.71□□□□□ -1.17
PHC3-217ENST00000497658 ATP1B4Q9UN42 357 aaPredicted RBP7.71□□□□□ -1.17
PHC3-217ENST00000497658 NOP58Q9Y2X3 529 aaKnown RBP7.71□□□□□ -1.17
PHC3-217ENST00000497658 THOC2Q8NI27 1593 aaKnown RBP7.71□□□□□ -1.18
PHC3-217ENST00000497658 CC2D2AQ9P2K1 1620 aa7.71□□□□□ -1.18
PHC3-217ENST00000497658 HSPA5P11021 654 aaKnown RBP7.71□□□□□ -1.18
PHC3-217ENST00000497658 HCSTQ9UBK5 93 aa7.71□□□□□ -1.18
PHC3-217ENST00000497658 CUL7Q14999 1698 aa7.7□□□□□ -1.18
PHC3-217ENST00000497658 PTPRKQ15262 1439 aa7.7□□□□□ -1.18
PHC3-217ENST00000497658 SNAPC4Q5SXM2 1469 aa7.7□□□□□ -1.18
PHC3-217ENST00000497658 IRX6P78412 446 aaPredicted RBP7.7□□□□□ -1.18
PHC3-217ENST00000497658 POTEEQ6S8J3 1075 aa7.7□□□□□ -1.18
PHC3-217ENST00000497658 NCOA1Q15788 1441 aa7.7□□□□□ -1.18
PHC3-217ENST00000497658 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.69□□□□□ -1.18
PHC3-217ENST00000497658 ZFP91Q96JP5 570 aaPredicted RBP7.69□□□□□ -1.18
PHC3-217ENST00000497658 ABCA10Q8WWZ4 1543 aa7.69□□□□□ -1.18
PHC3-217ENST00000497658 RIOK3O14730 519 aaKnown RBP7.69□□□□□ -1.18
PHC3-217ENST00000497658 HECW1Q76N89 1606 aa7.68□□□□□ -1.18
PHC3-217ENST00000497658 P3H3Q8IVL6 736 aa7.68□□□□□ -1.18
PHC3-217ENST00000497658 CCDC7Q96M83 1385 aa7.68□□□□□ -1.18
PHC3-217ENST00000497658 CTTNBP2Q8WZ74 1663 aa7.68□□□□□ -1.18
PHC3-217ENST00000497658 SUPT6HQ7KZ85 1726 aaKnown RBP7.68□□□□□ -1.18
PHC3-217ENST00000497658 EHBP1L1Q8N3D4 1523 aa7.68□□□□□ -1.18
PHC3-217ENST00000497658 MRS2Q9HD23 443 aa7.67□□□□□ -1.18
PHC3-217ENST00000497658 SMG6Q86US8 1419 aaKnown RBP7.67□□□□□ -1.18
PHC3-217ENST00000497658 NUDT7P0C024 238 aa7.67□□□□□ -1.18
PHC3-217ENST00000497658 ANP32AP39687 249 aaKnown RBP7.67□□□□□ -1.18
PHC3-217ENST00000497658 B4GALNT3Q6L9W6 998 aa7.67□□□□□ -1.18
PHC3-217ENST00000497658 AXIN2Q9Y2T1 843 aa7.67□□□□□ -1.18
PHC3-217ENST00000497658 TCOF1Q13428 1488 aaKnown RBP7.66□□□□□ -1.18
PHC3-217ENST00000497658 RNF123Q5XPI4 1314 aa7.66□□□□□ -1.18
PHC3-217ENST00000497658 VGFO15240 615 aaPredicted RBP7.66□□□□□ -1.18
PHC3-217ENST00000497658 RNF25Q96BH1 459 aaPredicted RBP7.66□□□□□ -1.18
PHC3-217ENST00000497658 GCC2Q8IWJ2 1684 aa7.66□□□□□ -1.18
PHC3-217ENST00000497658 ARHGEF11O15085 1522 aa7.66□□□□□ -1.18
PHC3-217ENST00000497658 KIF3CO14782 793 aa7.66□□□□□ -1.18
PHC3-217ENST00000497658 FAM9BQ8IZU0 186 aa7.66□□□□□ -1.18
PHC3-217ENST00000497658 IPO9Q96P70 1041 aaKnown RBP7.66□□□□□ -1.18
PHC3-217ENST00000497658 LHX6Q9UPM6 363 aa7.66□□□□□ -1.18
PHC3-217ENST00000497658 ABCA5Q8WWZ7 1642 aa7.66□□□□□ -1.18
PHC3-217ENST00000497658 UGGT2Q9NYU1 1516 aa7.65□□□□□ -1.18
PHC3-217ENST00000497658 SAMD9Q5K651 1589 aa7.65□□□□□ -1.18
PHC3-217ENST00000497658 NLRP6P59044 892 aa7.65□□□□□ -1.18
PHC3-217ENST00000497658 GRIN2BQ13224 1484 aa7.65□□□□□ -1.19
PHC3-217ENST00000497658 DNMBPQ6XZF7 1577 aa7.65□□□□□ -1.19
PHC3-217ENST00000497658 FBXO22Q8NEZ5 403 aa7.64□□□□□ -1.19
PHC3-217ENST00000497658 ARID4BQ4LE39 1312 aaPredicted RBP7.64□□□□□ -1.19
PHC3-217ENST00000497658 POLR1AO95602 1720 aaPredicted RBP7.64□□□□□ -1.19
PHC3-217ENST00000497658 DENND4BO75064 1496 aaPredicted RBP7.64□□□□□ -1.19
PHC3-217ENST00000497658 CCDC184Q52MB2 194 aa7.64□□□□□ -1.19
PHC3-217ENST00000497658 RTL5Q5HYW3 569 aaPredicted RBP7.64□□□□□ -1.19
PHC3-217ENST00000497658 SPATA31E1Q6ZUB1 1445 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms