RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 VWDEQ8N2E2 1590 aa16.26■□□□□ 0.19
SNRNP200-208ENST00000497539 ADGRL1O94910 1474 aa16.24■□□□□ 0.19
SNRNP200-208ENST00000497539 KDM5CP41229 1560 aa16.24■□□□□ 0.19
SNRNP200-208ENST00000497539 SPATA31E1Q6ZUB1 1445 aa16.24■□□□□ 0.19
SNRNP200-208ENST00000497539 BCORL1Q5H9F3 1711 aa16.23■□□□□ 0.19
SNRNP200-208ENST00000497539 RALGAPBQ86X10 1494 aa16.23■□□□□ 0.19
SNRNP200-208ENST00000497539 TSHZ2Q9NRE2 1034 aa16.22■□□□□ 0.19
SNRNP200-208ENST00000497539 TET3O43151 1660 aa16.21■□□□□ 0.19
SNRNP200-208ENST00000497539 PLA2R1Q13018 1463 aa16.21■□□□□ 0.19
SNRNP200-208ENST00000497539 PRDM15P57071 1507 aaPredicted RBP16.21■□□□□ 0.19
SNRNP200-208ENST00000497539 GLI2P10070 1586 aa16.21■□□□□ 0.18
SNRNP200-208ENST00000497539 BCANQ96GW7 911 aa16.21■□□□□ 0.18
SNRNP200-208ENST00000497539 ANO8Q9HCE9 1232 aaPredicted RBP16.21■□□□□ 0.18
SNRNP200-208ENST00000497539 KIDINS220Q9ULH0 1771 aa16.2■□□□□ 0.18
SNRNP200-208ENST00000497539 SPAG9O60271 1321 aaKnown RBP16.2■□□□□ 0.18
SNRNP200-208ENST00000497539 NEURL4Q96JN8 1562 aa16.19■□□□□ 0.18
SNRNP200-208ENST00000497539 ZNF518AQ6AHZ1 1483 aa16.19■□□□□ 0.18
SNRNP200-208ENST00000497539 NBPF8Q3BBV2 869 aa16.19■□□□□ 0.18
SNRNP200-208ENST00000497539 LAMC1P11047 1609 aa16.19■□□□□ 0.18
SNRNP200-208ENST00000497539 MROH1Q8NDA8 1641 aa16.19■□□□□ 0.18
SNRNP200-208ENST00000497539 MAP3K4Q9Y6R4 1608 aa16.19■□□□□ 0.18
SNRNP200-208ENST00000497539 RNF17Q9BXT8 1623 aaKnown RBP16.19■□□□□ 0.18
SNRNP200-208ENST00000497539 E9PCH4 1651 aa16.19■□□□□ 0.18
SNRNP200-208ENST00000497539 NEO1Q92859 1461 aa16.18■□□□□ 0.18
SNRNP200-208ENST00000497539 EIF4G2P78344 907 aaKnown RBP eCLIP16.18■□□□□ 0.18
SNRNP200-208ENST00000497539 SCAPERQ9BY12 1400 aa16.18■□□□□ 0.18
SNRNP200-208ENST00000497539 NPM1P06748 294 aaKnown RBP eCLIP16.17■□□□□ 0.18
SNRNP200-208ENST00000497539 HSPA5P11021 654 aaKnown RBP16.17■□□□□ 0.18
SNRNP200-208ENST00000497539 TRPM2O94759 1503 aa16.17■□□□□ 0.18
SNRNP200-208ENST00000497539 POGZQ7Z3K3 1410 aa16.16■□□□□ 0.18
SNRNP200-208ENST00000497539 MLH3Q9UHC1 1453 aa16.16■□□□□ 0.18
SNRNP200-208ENST00000497539 SPHKAPQ2M3C7 1700 aa16.15■□□□□ 0.18
SNRNP200-208ENST00000497539 RIMBP3CA6NJZ7 1639 aa16.15■□□□□ 0.18
SNRNP200-208ENST00000497539 RIMBP3BA6NNM3 1639 aa16.15■□□□□ 0.18
SNRNP200-208ENST00000497539 RIMBP3Q9UFD9 1639 aa16.15■□□□□ 0.18
SNRNP200-208ENST00000497539 LMTK2Q8IWU2 1503 aa16.15■□□□□ 0.18
SNRNP200-208ENST00000497539 CCDC144AA2RUR9 1427 aa16.15■□□□□ 0.18
SNRNP200-208ENST00000497539 CD109Q6YHK3 1445 aa16.15■□□□□ 0.18
SNRNP200-208ENST00000497539 TRPM1Q7Z4N2 1603 aa16.15■□□□□ 0.18
SNRNP200-208ENST00000497539 HECW2Q9P2P5 1572 aa16.14■□□□□ 0.17
SNRNP200-208ENST00000497539 CEP152O94986 1710 aa16.14■□□□□ 0.17
SNRNP200-208ENST00000497539 PTPRTO14522 1441 aa16.14■□□□□ 0.17
SNRNP200-208ENST00000497539 DHX29Q7Z478 1369 aaKnown RBP16.14■□□□□ 0.17
SNRNP200-208ENST00000497539 PLEKHG5O94827 1062 aa16.13■□□□□ 0.17
SNRNP200-208ENST00000497539 DDX10Q13206 875 aaKnown RBP16.12■□□□□ 0.17
SNRNP200-208ENST00000497539 AFAP1Q8N556 730 aa16.12■□□□□ 0.17
SNRNP200-208ENST00000497539 CCER2I3L3R5 266 aa16.11■□□□□ 0.17
SNRNP200-208ENST00000497539 WASHC2AQ641Q2 1341 aa16.1■□□□□ 0.17
SNRNP200-208ENST00000497539 CCDC7Q96M83 1385 aa16.1■□□□□ 0.17
SNRNP200-208ENST00000497539 CNTLNQ9NXG0 1405 aa16.1■□□□□ 0.17
SNRNP200-208ENST00000497539 FRMPD1Q5SYB0 1578 aa16.1■□□□□ 0.17
SNRNP200-208ENST00000497539 A2MP01023 1474 aa16.1■□□□□ 0.17
SNRNP200-208ENST00000497539 PRAG1Q86YV5 1406 aa16.09■□□□□ 0.17
SNRNP200-208ENST00000497539 EFCAB6Q5THR3 1501 aa16.09■□□□□ 0.17
SNRNP200-208ENST00000497539 RICTORQ6R327 1708 aa16.09■□□□□ 0.17
SNRNP200-208ENST00000497539 ARID4BQ4LE39 1312 aaPredicted RBP16.08■□□□□ 0.17
SNRNP200-208ENST00000497539 GPRASP1Q5JY77 1395 aa16.08■□□□□ 0.16
SNRNP200-208ENST00000497539 ABCA6Q8N139 1617 aa16.07■□□□□ 0.16
SNRNP200-208ENST00000497539 HIRIP3Q9BW71 556 aaPredicted RBP16.07■□□□□ 0.16
SNRNP200-208ENST00000497539 FKBP8Q14318 412 aa16.07■□□□□ 0.16
SNRNP200-208ENST00000497539 CLTCL1P53675 1640 aa16.06■□□□□ 0.16
SNRNP200-208ENST00000497539 KANK1Q14678 1352 aa16.06■□□□□ 0.16
SNRNP200-208ENST00000497539 USP47Q96K76 1375 aa16.06■□□□□ 0.16
SNRNP200-208ENST00000497539 DIP2BQ9P265 1576 aa16.04■□□□□ 0.16
SNRNP200-208ENST00000497539 PPRC1Q5VV67 1664 aaKnown RBP16.04■□□□□ 0.16
SNRNP200-208ENST00000497539 MADDQ8WXG6 1647 aa16.04■□□□□ 0.16
SNRNP200-208ENST00000497539 ZMYM4Q5VZL5 1548 aa16.04■□□□□ 0.16
SNRNP200-208ENST00000497539 DIP2CQ9Y2E4 1556 aa16.03■□□□□ 0.16
SNRNP200-208ENST00000497539 ANP32CO43423 234 aa16.02■□□□□ 0.16
SNRNP200-208ENST00000497539 KIAA1210Q9ULL0 1709 aa16.02■□□□□ 0.16
SNRNP200-208ENST00000497539 STAC3Q96MF2 364 aa16.02■□□□□ 0.16
SNRNP200-208ENST00000497539 ZC3H13Q5T200 1668 aaKnown RBP16.01■□□□□ 0.15
SNRNP200-208ENST00000497539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.01■□□□□ 0.159e-7■□□□□ 10.5
SNRNP200-208ENST00000497539 IFT172Q9UG01 1749 aa16■□□□□ 0.15
SNRNP200-208ENST00000497539 KIF7Q2M1P5 1343 aa16■□□□□ 0.15
SNRNP200-208ENST00000497539 C11orf95C9JLR9 678 aaPredicted RBP15.99■□□□□ 0.15
SNRNP200-208ENST00000497539 ROCK2O75116 1388 aaKnown RBP15.98■□□□□ 0.15
SNRNP200-208ENST00000497539 IQGAP1P46940 1657 aa15.97■□□□□ 0.15
SNRNP200-208ENST00000497539 REREQ9P2R6 1566 aa15.97■□□□□ 0.15
SNRNP200-208ENST00000497539 DCAF11Q8TEB1 546 aa15.97■□□□□ 0.15
SNRNP200-208ENST00000497539 MYOM2P54296 1465 aa15.97■□□□□ 0.15
SNRNP200-208ENST00000497539 KIF1BO60333 1816 aa15.97■□□□□ 0.15
SNRNP200-208ENST00000497539 PODXL2Q9NZ53 605 aa15.96■□□□□ 0.15
SNRNP200-208ENST00000497539 ABCC3O15438 1527 aa15.96■□□□□ 0.15
SNRNP200-208ENST00000497539 CAMSAP1Q5T5Y3 1602 aa15.96■□□□□ 0.15
SNRNP200-208ENST00000497539 ADGRB3O60242 1522 aa15.94■□□□□ 0.14
SNRNP200-208ENST00000497539 KIF3BO15066 747 aa15.94■□□□□ 0.14
SNRNP200-208ENST00000497539 CARD11Q9BXL7 1154 aa15.93■□□□□ 0.14
SNRNP200-208ENST00000497539 NRXN1Q9ULB1 1477 aa15.92■□□□□ 0.14
SNRNP200-208ENST00000497539 MROH2AA6NES4 1674 aa15.92■□□□□ 0.14
SNRNP200-208ENST00000497539 PIK3C2BO00750 1634 aa15.92■□□□□ 0.14
SNRNP200-208ENST00000497539 PKNOX2Q96KN3 472 aa15.91■□□□□ 0.14
SNRNP200-208ENST00000497539 ARHGAP31Q2M1Z3 1444 aa15.91■□□□□ 0.14
SNRNP200-208ENST00000497539 COL17A1Q9UMD9 1497 aaPredicted RBP15.9■□□□□ 0.14
SNRNP200-208ENST00000497539 DNAJC5Q9H3Z4 198 aa15.9■□□□□ 0.14
SNRNP200-208ENST00000497539 ZNF326Q5BKZ1 582 aaKnown RBP15.89■□□□□ 0.13
SNRNP200-208ENST00000497539 ERICH6BQ5W0A0 696 aa15.89■□□□□ 0.13
SNRNP200-208ENST00000497539 NPATQ14207 1427 aa15.88■□□□□ 0.13
SNRNP200-208ENST00000497539 KDM2AQ9Y2K7 1162 aa15.88■□□□□ 0.13
SNRNP200-208ENST00000497539 RBM19Q9Y4C8 960 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms