RNA–Protein interactions for RNA: ENST00000497155.1

USP13-204, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 899 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-204ENST00000497155 HCSTQ9UBK5 93 aa10.32□□□□□ -0.76
USP13-204ENST00000497155 BHMG1C9JSJ3 638 aaPredicted RBP10.31□□□□□ -0.76
USP13-204ENST00000497155 PHF14O94880 888 aa10.3□□□□□ -0.76
USP13-204ENST00000497155 COL9A1P20849 921 aa10.3□□□□□ -0.76
USP13-204ENST00000497155 TSHZ2Q9NRE2 1034 aa10.3□□□□□ -0.76
USP13-204ENST00000497155 TYW1BQ6NUM6 668 aa10.29□□□□□ -0.76
USP13-204ENST00000497155 PROX2Q3B8N5 592 aa10.28□□□□□ -0.76
USP13-204ENST00000497155 DDX12PQ92771 950 aa10.27□□□□□ -0.77
USP13-204ENST00000497155 PPP1R3GB7ZBB8 358 aa10.26□□□□□ -0.77
USP13-204ENST00000497155 PTPN5P54829 565 aa10.25□□□□□ -0.77
USP13-204ENST00000497155 FBXW7Q969H0 707 aa10.25□□□□□ -0.77
USP13-204ENST00000497155 RBM33Q96EV2 1170 aaKnown RBP10.25□□□□□ -0.77
USP13-204ENST00000497155 PLA2G2EQ9NZK7 142 aa10.25□□□□□ -0.77
USP13-204ENST00000497155 MRPL50Q8N5N7 158 aaKnown RBP10.23□□□□□ -0.77
USP13-204ENST00000497155 EPAS1Q99814 870 aa10.23□□□□□ -0.77
USP13-204ENST00000497155 PDIA6Q15084 440 aa10.22□□□□□ -0.77
USP13-204ENST00000497155 E2F4Q16254 413 aa10.22□□□□□ -0.77
USP13-204ENST00000497155 C6orf132Q5T0Z8 1188 aa10.22□□□□□ -0.77
USP13-204ENST00000497155 GOLGA8CPA6NN73 597 aa10.21□□□□□ -0.77
USP13-204ENST00000497155 THSD4Q6ZMP0 1018 aa10.21□□□□□ -0.77
USP13-204ENST00000497155 VSIG10Q8N0Z9 540 aa10.2□□□□□ -0.78
USP13-204ENST00000497155 WNT2BQ93097 391 aa10.2□□□□□ -0.78
USP13-204ENST00000497155 UNC13AQ9UPW8 1703 aa10.19□□□□□ -0.78
USP13-204ENST00000497155 NBR1Q14596 966 aa10.19□□□□□ -0.78
USP13-204ENST00000497155 NBPF3Q9H094 633 aa10.19□□□□□ -0.78
USP13-204ENST00000497155 WDR70Q9NW82 654 aa10.19□□□□□ -0.78
USP13-204ENST00000497155 RABGEF1Q9UJ41 708 aa10.19□□□□□ -0.78
USP13-204ENST00000497155 TSR1Q2NL82 804 aaKnown RBP10.18□□□□□ -0.78
USP13-204ENST00000497155 KDM2AQ9Y2K7 1162 aa10.18□□□□□ -0.78
USP13-204ENST00000497155 BICRAQ9NZM4 1560 aa10.18□□□□□ -0.78
USP13-204ENST00000497155 PRIM1P49642 420 aaKnown RBP10.17□□□□□ -0.78
USP13-204ENST00000497155 KIAA1468Q9P260 1216 aa10.17□□□□□ -0.78
USP13-204ENST00000497155 SPDYE16A6NNV3 312 aaPredicted RBP10.16□□□□□ -0.78
USP13-204ENST00000497155 EN1Q05925 392 aaPredicted RBP10.16□□□□□ -0.78
USP13-204ENST00000497155 MYO15BQ96JP2 1530 aa10.16□□□□□ -0.78
USP13-204ENST00000497155 MAP3K7O43318 606 aa10.14□□□□□ -0.79
USP13-204ENST00000497155 SEPT9Q9UHD8 586 aaPredicted RBP10.14□□□□□ -0.79
USP13-204ENST00000497155 ARIH1Q9Y4X5 557 aaPredicted RBP10.14□□□□□ -0.79
USP13-204ENST00000497155 GRXCR2A6NFK2 248 aa10.13□□□□□ -0.79
USP13-204ENST00000497155 TRIM6-TRIM34B2RNG4 842 aa10.13□□□□□ -0.79
USP13-204ENST00000497155 BCAMP50895 628 aa10.12□□□□□ -0.79
USP13-204ENST00000497155 ZCCHC6Q5VYS8 1495 aaKnown RBP10.11□□□□□ -0.79
USP13-204ENST00000497155 ONECUT3O60422 494 aaPredicted RBP10.1□□□□□ -0.79
USP13-204ENST00000497155 TSKSQ9UJT2 592 aa10.1□□□□□ -0.79
USP13-204ENST00000497155 LAPTM4BQ86VI4 370 aa10.09□□□□□ -0.79
USP13-204ENST00000497155 ANKK1Q8NFD2 765 aa10.09□□□□□ -0.79
USP13-204ENST00000497155 ZFRQ96KR1 1074 aaKnown RBP10.09□□□□□ -0.79
USP13-204ENST00000497155 CDHR5Q9HBB8 845 aa10.08□□□□□ -0.8
USP13-204ENST00000497155 OSBPP22059 807 aa10.07□□□□□ -0.8
USP13-204ENST00000497155 FAM198AQ9UFP1 575 aa10.07□□□□□ -0.8
USP13-204ENST00000497155 SOWAHBA6NEL2 793 aa10.06□□□□□ -0.8
USP13-204ENST00000497155 C3orf80F5H4A9 247 aa10.05□□□□□ -0.8
USP13-204ENST00000497155 SCRIBQ14160 1630 aa10.04□□□□□ -0.8
USP13-204ENST00000497155 SMAPO00193 183 aa10.04□□□□□ -0.8
USP13-204ENST00000497155 FAM98CQ17RN3 349 aaKnown RBP10.04□□□□□ -0.8
USP13-204ENST00000497155 CDCA7LQ96GN5 454 aa10.04□□□□□ -0.8
USP13-204ENST00000497155 WBP1LQ9NX94 342 aa10.03□□□□□ -0.8
USP13-204ENST00000497155 DCAF1Q9Y4B6 1507 aa10.02□□□□□ -0.8
USP13-204ENST00000497155 PRSS12P56730 875 aa10.02□□□□□ -0.81
USP13-204ENST00000497155 PACS2Q86VP3 889 aa10.01□□□□□ -0.81
USP13-204ENST00000497155 KCNV2Q8TDN2 545 aa10.01□□□□□ -0.81
USP13-204ENST00000497155 MLLT3P42568 568 aaPredicted RBP9.99□□□□□ -0.81
USP13-204ENST00000497155 IFFO2Q5TF58 517 aa9.99□□□□□ -0.81
USP13-204ENST00000497155 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.99□□□□□ -0.81
USP13-204ENST00000497155 LRCH3Q96II8 777 aa9.98□□□□□ -0.81
USP13-204ENST00000497155 HPS5Q9UPZ3 1129 aa9.98□□□□□ -0.81
USP13-204ENST00000497155 CERKQ8TCT0 537 aa9.97□□□□□ -0.81
USP13-204ENST00000497155 ARHGEF1Q92888 912 aaKnown RBP9.97□□□□□ -0.81
USP13-204ENST00000497155 NPDC1Q9NQX5 325 aaPredicted RBP9.97□□□□□ -0.81
USP13-204ENST00000497155 PNMA3Q9UL41 463 aa9.97□□□□□ -0.81
USP13-204ENST00000497155 A0A0G2JS52 829 aa9.96□□□□□ -0.82
USP13-204ENST00000497155 TATDN2Q93075 761 aa9.96□□□□□ -0.82
USP13-204ENST00000497155 TSR3Q9UJK0 312 aaKnown RBP9.96□□□□□ -0.82
USP13-204ENST00000497155 CECR2Q9BXF3 1484 aa9.96□□□□□ -0.82
USP13-204ENST00000497155 SHROOM4Q9ULL8 1493 aa9.96□□□□□ -0.82
USP13-204ENST00000497155 CC2D2AQ9P2K1 1620 aa9.96□□□□□ -0.82
USP13-204ENST00000497155 ITGBL1O95965 494 aaPredicted RBP9.95□□□□□ -0.82
USP13-204ENST00000497155 SAMD7Q7Z3H4 446 aa9.95□□□□□ -0.82
USP13-204ENST00000497155 PADI6Q6TGC4 694 aa9.94□□□□□ -0.82
USP13-204ENST00000497155 NUDT18Q6ZVK8 323 aa9.94□□□□□ -0.82
USP13-204ENST00000497155 NBPF26B4DH59 902 aa9.93□□□□□ -0.82
USP13-204ENST00000497155 EIF4G1Q04637 1599 aaKnown RBP9.92□□□□□ -0.82
USP13-204ENST00000497155 NYAP1Q6ZVC0 841 aa9.91□□□□□ -0.82
USP13-204ENST00000497155 RBM27Q9P2N5 1060 aaKnown RBP9.91□□□□□ -0.82
USP13-204ENST00000497155 TTC13Q8NBP0 860 aa9.9□□□□□ -0.82
USP13-204ENST00000497155 PPP4CP60510 307 aa9.89□□□□□ -0.83
USP13-204ENST00000497155 RNF40O75150 1001 aa9.87□□□□□ -0.83
USP13-204ENST00000497155 P3H3Q8IVL6 736 aa9.87□□□□□ -0.83
USP13-204ENST00000497155 KCNC4Q03721 635 aa9.86□□□□□ -0.83
USP13-204ENST00000497155 SEMA3EO15041 775 aa9.85□□□□□ -0.83
USP13-204ENST00000497155 RGS20O76081 388 aa9.84□□□□□ -0.83
USP13-204ENST00000497155 SWT1Q5T5J6 900 aaKnown RBP9.84□□□□□ -0.83
USP13-204ENST00000497155 BCANQ96GW7 911 aa9.84□□□□□ -0.83
USP13-204ENST00000497155 PTGDRQ13258 359 aa9.83□□□□□ -0.84
USP13-204ENST00000497155 EYA1Q99502 592 aa9.83□□□□□ -0.84
USP13-204ENST00000497155 TJAP1Q5JTD0 557 aa9.82□□□□□ -0.84
USP13-204ENST00000497155 APLP1P51693 650 aa9.81□□□□□ -0.84
USP13-204ENST00000497155 NUTM2FA1L443 756 aa9.8□□□□□ -0.84
USP13-204ENST00000497155 HDGFP51858 240 aaKnown RBP9.8□□□□□ -0.84
USP13-204ENST00000497155 FAM161AQ3B820 660 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms