RNA–Protein interactions for RNA: ENST00000497122.5

SOX2-OT-216, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 578 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-216ENST00000497122 ZBED2Q9BTP6 218 aa11.23□□□□□ -0.61
SOX2-OT-216ENST00000497122 PHF14O94880 888 aa11.21□□□□□ -0.61
SOX2-OT-216ENST00000497122 PTPN5P54829 565 aa11.21□□□□□ -0.61
SOX2-OT-216ENST00000497122 MRPL50Q8N5N7 158 aaKnown RBP11.21□□□□□ -0.61
SOX2-OT-216ENST00000497122 PLA2G2EQ9NZK7 142 aa11.21□□□□□ -0.61
SOX2-OT-216ENST00000497122 DDX12PQ92771 950 aa11.2□□□□□ -0.62
SOX2-OT-216ENST00000497122 FBXW7Q969H0 707 aa11.2□□□□□ -0.62
SOX2-OT-216ENST00000497122 RBM33Q96EV2 1170 aaKnown RBP11.2□□□□□ -0.62
SOX2-OT-216ENST00000497122 SLC4A5Q9BY07 1137 aa11.2□□□□□ -0.62
SOX2-OT-216ENST00000497122 WDR70Q9NW82 654 aa11.2□□□□□ -0.62
SOX2-OT-216ENST00000497122 PPP1R3GB7ZBB8 358 aa11.19□□□□□ -0.62
SOX2-OT-216ENST00000497122 NBPF3Q9H094 633 aa11.19□□□□□ -0.62
SOX2-OT-216ENST00000497122 KDM2AQ9Y2K7 1162 aa11.18□□□□□ -0.62
SOX2-OT-216ENST00000497122 COL9A1P20849 921 aa11.17□□□□□ -0.62
SOX2-OT-216ENST00000497122 PROX2Q3B8N5 592 aa11.17□□□□□ -0.62
SOX2-OT-216ENST00000497122 WNT2BQ93097 391 aa11.16□□□□□ -0.62
SOX2-OT-216ENST00000497122 EPAS1Q99814 870 aa11.15□□□□□ -0.62
SOX2-OT-216ENST00000497122 BHMG1C9JSJ3 638 aaPredicted RBP11.14□□□□□ -0.63
SOX2-OT-216ENST00000497122 NBR1Q14596 966 aa11.14□□□□□ -0.63
SOX2-OT-216ENST00000497122 E2F4Q16254 413 aa11.14□□□□□ -0.63
SOX2-OT-216ENST00000497122 C6orf132Q5T0Z8 1188 aa11.12□□□□□ -0.63
SOX2-OT-216ENST00000497122 MAP3K7O43318 606 aa11.11□□□□□ -0.63
SOX2-OT-216ENST00000497122 THSD4Q6ZMP0 1018 aa11.11□□□□□ -0.63
SOX2-OT-216ENST00000497122 PDIA6Q15084 440 aa11.1□□□□□ -0.63
SOX2-OT-216ENST00000497122 RABGEF1Q9UJ41 708 aa11.1□□□□□ -0.63
SOX2-OT-216ENST00000497122 KIAA1468Q9P260 1216 aa11.09□□□□□ -0.63
SOX2-OT-216ENST00000497122 GRXCR2A6NFK2 248 aa11.07□□□□□ -0.64
SOX2-OT-216ENST00000497122 SPDYE16A6NNV3 312 aaPredicted RBP11.07□□□□□ -0.64
SOX2-OT-216ENST00000497122 ANKK1Q8NFD2 765 aa11.07□□□□□ -0.64
SOX2-OT-216ENST00000497122 SEPT9Q9UHD8 586 aaPredicted RBP11.06□□□□□ -0.64
SOX2-OT-216ENST00000497122 EN1Q05925 392 aaPredicted RBP11.05□□□□□ -0.64
SOX2-OT-216ENST00000497122 TSR1Q2NL82 804 aaKnown RBP11.05□□□□□ -0.64
SOX2-OT-216ENST00000497122 TRIM6-TRIM34B2RNG4 842 aa11.02□□□□□ -0.65
SOX2-OT-216ENST00000497122 BCAMP50895 628 aa11.02□□□□□ -0.65
SOX2-OT-216ENST00000497122 TSHZ2Q9NRE2 1034 aa11.01□□□□□ -0.65
SOX2-OT-216ENST00000497122 LAPTM4BQ86VI4 370 aa11□□□□□ -0.65
SOX2-OT-216ENST00000497122 ZFRQ96KR1 1074 aaKnown RBP10.99□□□□□ -0.65
SOX2-OT-216ENST00000497122 PACS2Q86VP3 889 aa10.98□□□□□ -0.65
SOX2-OT-216ENST00000497122 ONECUT3O60422 494 aaPredicted RBP10.97□□□□□ -0.65
SOX2-OT-216ENST00000497122 FAM98CQ17RN3 349 aaKnown RBP10.96□□□□□ -0.65
SOX2-OT-216ENST00000497122 SOWAHBA6NEL2 793 aa10.95□□□□□ -0.66
SOX2-OT-216ENST00000497122 TSKSQ9UJT2 592 aa10.95□□□□□ -0.66
SOX2-OT-216ENST00000497122 ARIH1Q9Y4X5 557 aaPredicted RBP10.95□□□□□ -0.66
SOX2-OT-216ENST00000497122 PRIM1P49642 420 aaKnown RBP10.94□□□□□ -0.66
SOX2-OT-216ENST00000497122 CDCA7LQ96GN5 454 aa10.94□□□□□ -0.66
SOX2-OT-216ENST00000497122 LRCH3Q96II8 777 aa10.94□□□□□ -0.66
SOX2-OT-216ENST00000497122 SMAPO00193 183 aa10.92□□□□□ -0.66
SOX2-OT-216ENST00000497122 CDHR5Q9HBB8 845 aa10.92□□□□□ -0.66
SOX2-OT-216ENST00000497122 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.92□□□□□ -0.66
SOX2-OT-216ENST00000497122 OSBPP22059 807 aa10.91□□□□□ -0.66
SOX2-OT-216ENST00000497122 PRSS12P56730 875 aa10.91□□□□□ -0.66
SOX2-OT-216ENST00000497122 WBP1LQ9NX94 342 aa10.91□□□□□ -0.66
SOX2-OT-216ENST00000497122 HPS5Q9UPZ3 1129 aa10.91□□□□□ -0.66
SOX2-OT-216ENST00000497122 CERKQ8TCT0 537 aa10.9□□□□□ -0.66
SOX2-OT-216ENST00000497122 NBPF26B4DH59 902 aa10.88□□□□□ -0.67
SOX2-OT-216ENST00000497122 PNMA3Q9UL41 463 aa10.88□□□□□ -0.67
SOX2-OT-216ENST00000497122 RNF40O75150 1001 aa10.87□□□□□ -0.67
SOX2-OT-216ENST00000497122 KCNV2Q8TDN2 545 aa10.87□□□□□ -0.67
SOX2-OT-216ENST00000497122 TSR3Q9UJK0 312 aaKnown RBP10.87□□□□□ -0.67
SOX2-OT-216ENST00000497122 NYAP1Q6ZVC0 841 aa10.86□□□□□ -0.67
SOX2-OT-216ENST00000497122 FAM198AQ9UFP1 575 aa10.86□□□□□ -0.67
SOX2-OT-216ENST00000497122 SAMD7Q7Z3H4 446 aa10.85□□□□□ -0.67
SOX2-OT-216ENST00000497122 A0A0G2JS52 829 aa10.84□□□□□ -0.67
SOX2-OT-216ENST00000497122 PPP4CP60510 307 aa10.84□□□□□ -0.67
SOX2-OT-216ENST00000497122 ARHGEF1Q92888 912 aaKnown RBP10.84□□□□□ -0.67
SOX2-OT-216ENST00000497122 TATDN2Q93075 761 aa10.84□□□□□ -0.67
SOX2-OT-216ENST00000497122 MLLT3P42568 568 aaPredicted RBP10.83□□□□□ -0.68
SOX2-OT-216ENST00000497122 NUDT18Q6ZVK8 323 aa10.83□□□□□ -0.68
SOX2-OT-216ENST00000497122 C3orf80F5H4A9 247 aa10.82□□□□□ -0.68
SOX2-OT-216ENST00000497122 IFFO2Q5TF58 517 aa10.82□□□□□ -0.68
SOX2-OT-216ENST00000497122 TIMELESSQ9UNS1 1208 aa10.82□□□□□ -0.68
SOX2-OT-216ENST00000497122 TULP1O00294 542 aaPredicted RBP10.81□□□□□ -0.68
SOX2-OT-216ENST00000497122 HDGFP51858 240 aaKnown RBP10.81□□□□□ -0.68
SOX2-OT-216ENST00000497122 PADI6Q6TGC4 694 aa10.81□□□□□ -0.68
SOX2-OT-216ENST00000497122 ITGBL1O95965 494 aaPredicted RBP10.8□□□□□ -0.68
SOX2-OT-216ENST00000497122 KCNC4Q03721 635 aa10.8□□□□□ -0.68
SOX2-OT-216ENST00000497122 RBM27Q9P2N5 1060 aaKnown RBP10.78□□□□□ -0.68
SOX2-OT-216ENST00000497122 P3H3Q8IVL6 736 aa10.77□□□□□ -0.69
SOX2-OT-216ENST00000497122 NUTM2FA1L443 756 aa10.75□□□□□ -0.69
SOX2-OT-216ENST00000497122 NPDC1Q9NQX5 325 aaPredicted RBP10.75□□□□□ -0.69
SOX2-OT-216ENST00000497122 RGS20O76081 388 aa10.73□□□□□ -0.69
SOX2-OT-216ENST00000497122 GTF3C3Q9Y5Q9 886 aa10.72□□□□□ -0.69
SOX2-OT-216ENST00000497122 SLC4A3P48751 1232 aa10.71□□□□□ -0.69
SOX2-OT-216ENST00000497122 SWT1Q5T5J6 900 aaKnown RBP10.71□□□□□ -0.69
SOX2-OT-216ENST00000497122 SEMA3EO15041 775 aa10.7□□□□□ -0.7
SOX2-OT-216ENST00000497122 TTC13Q8NBP0 860 aa10.7□□□□□ -0.7
SOX2-OT-216ENST00000497122 IRX2Q9BZI1 471 aaPredicted RBP10.7□□□□□ -0.7
SOX2-OT-216ENST00000497122 SLF2Q8IX21 1173 aa10.69□□□□□ -0.7
SOX2-OT-216ENST00000497122 PTGDRQ13258 359 aa10.68□□□□□ -0.7
SOX2-OT-216ENST00000497122 MTRQ99707 1265 aa10.68□□□□□ -0.7
SOX2-OT-216ENST00000497122 APLP1P51693 650 aa10.66□□□□□ -0.7
SOX2-OT-216ENST00000497122 TJAP1Q5JTD0 557 aa10.65□□□□□ -0.7
SOX2-OT-216ENST00000497122 NECTIN2Q92692 538 aa10.65□□□□□ -0.7
SOX2-OT-216ENST00000497122 EYA1Q99502 592 aa10.65□□□□□ -0.7
SOX2-OT-216ENST00000497122 IL21Q9HBE4 155 aa10.65□□□□□ -0.7
SOX2-OT-216ENST00000497122 COPS2P61201 443 aa10.64□□□□□ -0.71
SOX2-OT-216ENST00000497122 FAM161AQ3B820 660 aa10.64□□□□□ -0.71
SOX2-OT-216ENST00000497122 RBM46Q8TBY0 533 aaKnown RBP10.64□□□□□ -0.71
SOX2-OT-216ENST00000497122 FCHSD2O94868 740 aa10.63□□□□□ -0.71
SOX2-OT-216ENST00000497122 DNAJB2P25686 324 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms