RNA–Protein interactions for RNA: ENST00000496854.1

ITGAV-208, Transcript of integrin subunit alpha V, humanhuman

TSL 3

Gene ITGAV, Length 611 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAV-208ENST00000496854 NUP153P49790 1475 aaKnown RBP13.46□□□□□ -0.25
ITGAV-208ENST00000496854 FHOD3Q2V2M9 1422 aa13.44□□□□□ -0.26
ITGAV-208ENST00000496854 COLQQ9Y215 455 aaPredicted RBP13.43□□□□□ -0.26
ITGAV-208ENST00000496854 ADAMTSL3P82987 1691 aa13.42□□□□□ -0.26
ITGAV-208ENST00000496854 ARHGEF40Q8TER5 1519 aa13.41□□□□□ -0.26
ITGAV-208ENST00000496854 TTC37Q6PGP7 1564 aa13.41□□□□□ -0.26
ITGAV-208ENST00000496854 EEA1Q15075 1411 aa13.4□□□□□ -0.26
ITGAV-208ENST00000496854 BCORL1Q5H9F3 1711 aa13.4□□□□□ -0.26
ITGAV-208ENST00000496854 RICTORQ6R327 1708 aa13.4□□□□□ -0.26
ITGAV-208ENST00000496854 POTEFA5A3E0 1075 aa13.4□□□□□ -0.26
ITGAV-208ENST00000496854 PLCG2P16885 1265 aa13.4□□□□□ -0.26
ITGAV-208ENST00000496854 NEO1Q92859 1461 aa13.4□□□□□ -0.26
ITGAV-208ENST00000496854 POTEB2H3BUK9 544 aa13.39□□□□□ -0.27
ITGAV-208ENST00000496854 MADDQ8WXG6 1647 aa13.39□□□□□ -0.27
ITGAV-208ENST00000496854 EFCAB5A4FU69 1503 aa13.39□□□□□ -0.27
ITGAV-208ENST00000496854 IRX5P78411 483 aaPredicted RBP13.38□□□□□ -0.27
ITGAV-208ENST00000496854 SIGLEC1Q9BZZ2 1709 aa13.37□□□□□ -0.27
ITGAV-208ENST00000496854 STK25O00506 426 aa13.37□□□□□ -0.27
ITGAV-208ENST00000496854 BCL11BQ9C0K0 894 aaPredicted RBP13.37□□□□□ -0.27
ITGAV-208ENST00000496854 OCEL1Q9H607 264 aa13.37□□□□□ -0.27
ITGAV-208ENST00000496854 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.37□□□□□ -0.27
ITGAV-208ENST00000496854 CFAP74Q9C0B2 1584 aa13.37□□□□□ -0.27
ITGAV-208ENST00000496854 ILDR1Q86SU0 546 aaPredicted RBP13.36□□□□□ -0.27
ITGAV-208ENST00000496854 STK24Q9Y6E0 443 aa13.36□□□□□ -0.27
ITGAV-208ENST00000496854 CDK13Q14004 1512 aaKnown RBP13.35□□□□□ -0.27
ITGAV-208ENST00000496854 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.35□□□□□ -0.27
ITGAV-208ENST00000496854 PTPRMP28827 1452 aa13.35□□□□□ -0.27
ITGAV-208ENST00000496854 EFCAB3Q8N7B9 438 aa13.34□□□□□ -0.27
ITGAV-208ENST00000496854 PHLDB1Q86UU1 1377 aa13.33□□□□□ -0.27
ITGAV-208ENST00000496854 RAPGEF3O95398 923 aa13.33□□□□□ -0.28
ITGAV-208ENST00000496854 RANGAP1P46060 587 aaPredicted RBP13.33□□□□□ -0.28
ITGAV-208ENST00000496854 AMER1Q5JTC6 1135 aaPredicted RBP13.33□□□□□ -0.28
ITGAV-208ENST00000496854 RIMS1Q86UR5 1692 aaKnown RBP13.33□□□□□ -0.28
ITGAV-208ENST00000496854 ZMYM4Q5VZL5 1548 aa13.33□□□□□ -0.28
ITGAV-208ENST00000496854 FANCAO15360 1455 aa13.3□□□□□ -0.28
ITGAV-208ENST00000496854 DENND4BO75064 1496 aaPredicted RBP13.29□□□□□ -0.28
ITGAV-208ENST00000496854 PCF11O94913 1555 aaKnown RBP13.29□□□□□ -0.28
ITGAV-208ENST00000496854 HECW1Q76N89 1606 aa13.29□□□□□ -0.28
ITGAV-208ENST00000496854 POTEJP0CG39 1038 aa13.29□□□□□ -0.28
ITGAV-208ENST00000496854 FAM9AQ8IZU1 332 aaPredicted RBP13.29□□□□□ -0.28
ITGAV-208ENST00000496854 LRRIQ1Q96JM4 1722 aa13.29□□□□□ -0.28
ITGAV-208ENST00000496854 AKNAQ7Z591 1439 aa13.28□□□□□ -0.28
ITGAV-208ENST00000496854 LMTK3Q96Q04 1460 aa13.28□□□□□ -0.28
ITGAV-208ENST00000496854 ZFYVE16Q7Z3T8 1539 aa13.28□□□□□ -0.28
ITGAV-208ENST00000496854 PDCD7Q8N8D1 485 aaKnown RBP13.27□□□□□ -0.29
ITGAV-208ENST00000496854 RTN4Q9NQC3 1192 aaKnown RBP13.27□□□□□ -0.29
ITGAV-208ENST00000496854 KIF14Q15058 1648 aa13.27□□□□□ -0.29
ITGAV-208ENST00000496854 MYO5CQ9NQX4 1742 aa13.27□□□□□ -0.29
ITGAV-208ENST00000496854 MAMSTRQ6ZN01 415 aa13.26□□□□□ -0.29
ITGAV-208ENST00000496854 YEATS2Q9ULM3 1422 aa13.26□□□□□ -0.29
ITGAV-208ENST00000496854 ARHGAP35Q9NRY4 1499 aa13.25□□□□□ -0.29
ITGAV-208ENST00000496854 CHGAP10645 457 aaKnown RBP13.25□□□□□ -0.29
ITGAV-208ENST00000496854 OTUD5Q96G74 571 aa13.25□□□□□ -0.29
ITGAV-208ENST00000496854 FER1L4A9Z1Z3 1794 aa13.25□□□□□ -0.29
ITGAV-208ENST00000496854 SOX12O15370 315 aa13.24□□□□□ -0.29
ITGAV-208ENST00000496854 SCUBE2Q9NQ36 999 aa13.24□□□□□ -0.29
ITGAV-208ENST00000496854 POGZQ7Z3K3 1410 aa13.23□□□□□ -0.29
ITGAV-208ENST00000496854 PLEKHD1A6NEE1 506 aa13.21□□□□□ -0.29
ITGAV-208ENST00000496854 DPY19L2Q6NUT2 758 aa13.21□□□□□ -0.29
ITGAV-208ENST00000496854 PHF8Q9UPP1 1060 aa13.21□□□□□ -0.29
ITGAV-208ENST00000496854 ARID4BQ4LE39 1312 aaPredicted RBP13.2□□□□□ -0.3
ITGAV-208ENST00000496854 HS6ST3Q8IZP7 471 aa13.2□□□□□ -0.3
ITGAV-208ENST00000496854 FMN1Q68DA7 1419 aa13.2□□□□□ -0.3
ITGAV-208ENST00000496854 MAGI2Q86UL8 1455 aa13.19□□□□□ -0.3
ITGAV-208ENST00000496854 L3MBTL3Q96JM7 780 aaPredicted RBP13.19□□□□□ -0.3
ITGAV-208ENST00000496854 PLCH2O75038 1416 aa13.19□□□□□ -0.3
ITGAV-208ENST00000496854 KDM5CP41229 1560 aa13.19□□□□□ -0.3
ITGAV-208ENST00000496854 ARHGEF12Q9NZN5 1544 aa13.18□□□□□ -0.3
ITGAV-208ENST00000496854 SCAPERQ9BY12 1400 aa13.17□□□□□ -0.3
ITGAV-208ENST00000496854 NLRP6P59044 892 aa13.17□□□□□ -0.3
ITGAV-208ENST00000496854 PREX2Q70Z35 1606 aa13.17□□□□□ -0.3
ITGAV-208ENST00000496854 CDC42BPBQ9Y5S2 1711 aa13.16□□□□□ -0.3
ITGAV-208ENST00000496854 G3V3G9 751 aa13.16□□□□□ -0.3
ITGAV-208ENST00000496854 ABCA6Q8N139 1617 aa13.16□□□□□ -0.3
ITGAV-208ENST00000496854 DIP2CQ9Y2E4 1556 aa13.15□□□□□ -0.3
ITGAV-208ENST00000496854 TROQ12816 1431 aaPredicted RBP13.15□□□□□ -0.3
ITGAV-208ENST00000496854 ARHGAP5Q13017 1502 aa13.15□□□□□ -0.3
ITGAV-208ENST00000496854 PREX1Q8TCU6 1659 aa13.15□□□□□ -0.31
ITGAV-208ENST00000496854 C9orf84Q5VXU9 1444 aa13.14□□□□□ -0.31
ITGAV-208ENST00000496854 MFRPQ9BY79 579 aa13.14□□□□□ -0.31
ITGAV-208ENST00000496854 ITSN2Q9NZM3 1697 aa13.14□□□□□ -0.31
ITGAV-208ENST00000496854 ABCC1P33527 1531 aa13.13□□□□□ -0.31
ITGAV-208ENST00000496854 ZNF518AQ6AHZ1 1483 aa13.13□□□□□ -0.31
ITGAV-208ENST00000496854 MS4A4AQ96JQ5 239 aa13.12□□□□□ -0.31
ITGAV-208ENST00000496854 BOLA1Q9Y3E2 137 aa13.12□□□□□ -0.31
ITGAV-208ENST00000496854 REREQ9P2R6 1566 aa13.11□□□□□ -0.31
ITGAV-208ENST00000496854 ATP10AO60312 1499 aa13.11□□□□□ -0.31
ITGAV-208ENST00000496854 CDC42BPAQ5VT25 1732 aa13.11□□□□□ -0.31
ITGAV-208ENST00000496854 C3orf67Q6ZVT6 689 aa13.11□□□□□ -0.31
ITGAV-208ENST00000496854 FBXO22Q8NEZ5 403 aa13.11□□□□□ -0.31
ITGAV-208ENST00000496854 UBTFP17480 764 aaKnown RBP13.1□□□□□ -0.31
ITGAV-208ENST00000496854 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.1□□□□□ -0.31
ITGAV-208ENST00000496854 CLIP1P30622 1438 aa13.1□□□□□ -0.31
ITGAV-208ENST00000496854 HSPA2P54652 639 aa13.09□□□□□ -0.31
ITGAV-208ENST00000496854 MLECQ14165 292 aa13.09□□□□□ -0.31
ITGAV-208ENST00000496854 FBXO41Q8TF61 875 aa13.09□□□□□ -0.31
ITGAV-208ENST00000496854 ATP1B4Q9UN42 357 aaPredicted RBP13.09□□□□□ -0.31
ITGAV-208ENST00000496854 CCDC18Q5T9S5 1454 aa13.09□□□□□ -0.31
ITGAV-208ENST00000496854 SLAIN1Q8ND83 568 aa13.08□□□□□ -0.32
ITGAV-208ENST00000496854 C3P01024 1663 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms