RNA–Protein interactions for RNA: ENST00000496804.5

MACF1-224, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 5,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-224ENST00000496804 CCDC18Q5T9S5 1454 aa10.96□□□□□ -0.66
MACF1-224ENST00000496804 BBXQ8WY36 941 aaPredicted RBP10.95□□□□□ -0.66
MACF1-224ENST00000496804 GOLGA6L4A6NEF3 574 aa10.95□□□□□ -0.66
MACF1-224ENST00000496804 COG6Q9Y2V7 657 aa10.95□□□□□ -0.66
MACF1-224ENST00000496804 TAF3Q5VWG9 929 aa10.95□□□□□ -0.66
MACF1-224ENST00000496804 RRAGDQ9NQL2 400 aaPredicted RBP10.95□□□□□ -0.66
MACF1-224ENST00000496804 KIF21BO75037 1637 aa10.94□□□□□ -0.66
MACF1-224ENST00000496804 ITPRIPQ8IWB1 547 aa10.94□□□□□ -0.66
MACF1-224ENST00000496804 CDCA7LQ96GN5 454 aa10.94□□□□□ -0.66
MACF1-224ENST00000496804 DIAPH3Q9NSV4 1193 aa10.93□□□□□ -0.66
MACF1-224ENST00000496804 WIZO95785 1651 aa10.93□□□□□ -0.66
MACF1-224ENST00000496804 MCCP23508 829 aa10.93□□□□□ -0.66
MACF1-224ENST00000496804 XRCC6P12956 609 aaKnown RBP eCLIP10.92□□□□□ -0.66
MACF1-224ENST00000496804 CCDC146Q8IYE0 955 aa10.92□□□□□ -0.66
MACF1-224ENST00000496804 SKAP1Q86WV1 359 aa10.92□□□□□ -0.66
MACF1-224ENST00000496804 USP47Q96K76 1375 aa10.91□□□□□ -0.66
MACF1-224ENST00000496804 PNISRQ8TF01 805 aaKnown RBP10.91□□□□□ -0.66
MACF1-224ENST00000496804 BRD4O60885 1362 aaPredicted RBP10.91□□□□□ -0.66
MACF1-224ENST00000496804 FOXD4L5Q5VV16 416 aaPredicted RBP10.91□□□□□ -0.66
MACF1-224ENST00000496804 MCTP1Q6DN14 999 aa10.91□□□□□ -0.66
MACF1-224ENST00000496804 FOXD4L4Q8WXT5 416 aaPredicted RBP10.91□□□□□ -0.66
MACF1-224ENST00000496804 ST18O60284 1047 aa10.91□□□□□ -0.66
MACF1-224ENST00000496804 IPO8O15397 1037 aaKnown RBP10.9□□□□□ -0.66
MACF1-224ENST00000496804 APPP05067 770 aa10.9□□□□□ -0.66
MACF1-224ENST00000496804 HTATSF1O43719 755 aaKnown RBP10.9□□□□□ -0.66
MACF1-224ENST00000496804 PKD2Q13563 968 aa10.9□□□□□ -0.66
MACF1-224ENST00000496804 EIF3AQ14152 1382 aaKnown RBP10.9□□□□□ -0.67
MACF1-224ENST00000496804 UACAQ9BZF9 1416 aa10.9□□□□□ -0.67
MACF1-224ENST00000496804 E9PSI1 815 aa10.89□□□□□ -0.67
MACF1-224ENST00000496804 NUCB2P80303 420 aa10.89□□□□□ -0.67
MACF1-224ENST00000496804 CAVIN1Q6NZI2 390 aaKnown RBP10.89□□□□□ -0.67
MACF1-224ENST00000496804 KIF16BQ96L93 1317 aa10.89□□□□□ -0.67
MACF1-224ENST00000496804 ST20-MTHFSA0A0A6YYL1 179 aa10.89□□□□□ -0.67
MACF1-224ENST00000496804 PANK2Q9BZ23 570 aa10.89□□□□□ -0.67
MACF1-224ENST00000496804 CBX1P83916 185 aa10.88□□□□□ -0.67
MACF1-224ENST00000496804 GOLGA6L1Q8N7Z2 621 aa10.88□□□□□ -0.67
MACF1-224ENST00000496804 CFDP1Q9UEE9 299 aaPredicted RBP10.88□□□□□ -0.67
MACF1-224ENST00000496804 MAPK8IP2Q13387 824 aaPredicted RBP10.88□□□□□ -0.67
MACF1-224ENST00000496804 RNF214Q8ND24 703 aa10.88□□□□□ -0.67
MACF1-224ENST00000496804 CARMIL1Q5VZK9 1371 aa10.87□□□□□ -0.67
MACF1-224ENST00000496804 TEX35Q5T0J7 233 aa10.87□□□□□ -0.67
MACF1-224ENST00000496804 NACADO15069 1562 aa10.87□□□□□ -0.67
MACF1-224ENST00000496804 CHGAP10645 457 aaKnown RBP10.87□□□□□ -0.67
MACF1-224ENST00000496804 SASS6Q6UVJ0 657 aa10.87□□□□□ -0.67
MACF1-224ENST00000496804 SMC4Q9NTJ3 1288 aa10.87□□□□□ -0.67
MACF1-224ENST00000496804 ZNF592Q92610 1267 aa10.86□□□□□ -0.67
MACF1-224ENST00000496804 DYNC1I1O14576 645 aa10.86□□□□□ -0.67
MACF1-224ENST00000496804 XPCQ01831 940 aaPredicted RBP10.85□□□□□ -0.67
MACF1-224ENST00000496804 CGNQ9P2M7 1197 aaKnown RBP10.85□□□□□ -0.67
MACF1-224ENST00000496804 TOP2AP11388 1531 aaKnown RBP10.85□□□□□ -0.67
MACF1-224ENST00000496804 BCL2L13Q9BXK5 485 aa10.85□□□□□ -0.67
MACF1-224ENST00000496804 KIF3AQ9Y496 699 aa10.84□□□□□ -0.67
MACF1-224ENST00000496804 PDCL2Q8N4E4 241 aa10.84□□□□□ -0.67
MACF1-224ENST00000496804 AAMPQ13685 434 aa10.84□□□□□ -0.67
MACF1-224ENST00000496804 SMAP1Q8IYB5 467 aaPredicted RBP10.84□□□□□ -0.67
MACF1-224ENST00000496804 GPS2Q13227 327 aa10.84□□□□□ -0.67
MACF1-224ENST00000496804 PANK3Q9H999 370 aa10.84□□□□□ -0.67
MACF1-224ENST00000496804 U2SURPO15042 1029 aaKnown RBP10.83□□□□□ -0.68
MACF1-224ENST00000496804 CIZ1Q9ULV3 898 aaPredicted RBP10.83□□□□□ -0.68
MACF1-224ENST00000496804 PANK1Q8TE04 598 aa10.83□□□□□ -0.68
MACF1-224ENST00000496804 FOXD4L6Q3SYB3 417 aaPredicted RBP10.83□□□□□ -0.68
MACF1-224ENST00000496804 FOXD4L3Q6VB84 417 aaPredicted RBP10.83□□□□□ -0.68
MACF1-224ENST00000496804 APAF1O14727 1248 aa10.82□□□□□ -0.68
MACF1-224ENST00000496804 NOL8Q76FK4 1167 aaKnown RBP10.82□□□□□ -0.68
MACF1-224ENST00000496804 MORC1Q86VD1 984 aa10.82□□□□□ -0.68
MACF1-224ENST00000496804 APBB1O00213 710 aa10.82□□□□□ -0.68
MACF1-224ENST00000496804 ZKSCAN2Q63HK3 967 aa10.82□□□□□ -0.68
MACF1-224ENST00000496804 PDZRN3Q9UPQ7 1066 aa10.82□□□□□ -0.68
MACF1-224ENST00000496804 TBC1D2Q9BYX2 928 aa10.82□□□□□ -0.68
MACF1-224ENST00000496804 PDIA4P13667 645 aaKnown RBP10.81□□□□□ -0.68
MACF1-224ENST00000496804 IFT57Q9NWB7 429 aa10.81□□□□□ -0.68
MACF1-224ENST00000496804 PRPF40AO75400 957 aaKnown RBP10.81□□□□□ -0.68
MACF1-224ENST00000496804 NOM1Q5C9Z4 860 aaKnown RBP10.81□□□□□ -0.68
MACF1-224ENST00000496804 ANKRD45Q5TZF3 282 aa10.81□□□□□ -0.68
MACF1-224ENST00000496804 MBD3O95983 291 aa10.8□□□□□ -0.68
MACF1-224ENST00000496804 LETM1O95202 739 aaPredicted RBP10.8□□□□□ -0.68
MACF1-224ENST00000496804 TPM3P06753 285 aa10.8□□□□□ -0.68
MACF1-224ENST00000496804 OFD1O75665 1012 aa10.8□□□□□ -0.68
MACF1-224ENST00000496804 TSPY26PQ9H489 355 aa10.8□□□□□ -0.68
MACF1-224ENST00000496804 CUX2O14529 1486 aa10.8□□□□□ -0.68
MACF1-224ENST00000496804 GTPBP4Q9BZE4 634 aaKnown RBP10.79□□□□□ -0.68
MACF1-224ENST00000496804 FBLN2P98095 1184 aa10.79□□□□□ -0.68
MACF1-224ENST00000496804 PDE3AQ14432 1141 aa10.79□□□□□ -0.68
MACF1-224ENST00000496804 KCNJ4P48050 445 aa10.78□□□□□ -0.68
MACF1-224ENST00000496804 SETQ01105 290 aaPredicted RBP10.78□□□□□ -0.68
MACF1-224ENST00000496804 PPP4R3BQ5MIZ7 849 aa10.78□□□□□ -0.68
MACF1-224ENST00000496804 NGEFQ8N5V2 710 aa10.78□□□□□ -0.68
MACF1-224ENST00000496804 CWC15Q9P013 229 aaKnown RBP10.78□□□□□ -0.68
MACF1-224ENST00000496804 ADAMTS8Q9UP79 889 aa10.78□□□□□ -0.68
MACF1-224ENST00000496804 C20orf194Q5TEA3 1177 aa10.78□□□□□ -0.68
MACF1-224ENST00000496804 MPNDQ8N594 471 aa10.78□□□□□ -0.68
MACF1-224ENST00000496804 LRRC9Q6ZRR7 1453 aa10.78□□□□□ -0.68
MACF1-224ENST00000496804 U2AF1L5P0DN76 240 aaPredicted RBP10.78□□□□□ -0.68
MACF1-224ENST00000496804 MCM5P33992 734 aa10.78□□□□□ -0.68
MACF1-224ENST00000496804 U2AF1Q01081 240 aaKnown RBP eCLIP10.78□□□□□ -0.68
MACF1-224ENST00000496804 DDX19BQ9UMR2 479 aa10.78□□□□□ -0.68
MACF1-224ENST00000496804 AEBP1Q8IUX7 1158 aa10.77□□□□□ -0.68
MACF1-224ENST00000496804 CCDC94Q9BW85 323 aaPredicted RBP10.77□□□□□ -0.68
MACF1-224ENST00000496804 RRP7AQ9Y3A4 280 aaKnown RBP10.77□□□□□ -0.68
MACF1-224ENST00000496804 TSPYL1Q9H0U9 437 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms