RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 KDM5CP41229 1560 aa19.47■□□□□ 0.71
SPTBN1-205ENST00000496323 MAP3K4Q9Y6R4 1608 aa19.47■□□□□ 0.71
SPTBN1-205ENST00000496323 KIDINS220Q9ULH0 1771 aa19.46■□□□□ 0.71
SPTBN1-205ENST00000496323 FAM69CQ0P6D2 419 aa19.45■□□□□ 0.7
SPTBN1-205ENST00000496323 MLH3Q9UHC1 1453 aa19.45■□□□□ 0.7
SPTBN1-205ENST00000496323 KIF3BO15066 747 aa19.44■□□□□ 0.7
SPTBN1-205ENST00000496323 RAPGEF3O95398 923 aa19.44■□□□□ 0.7
SPTBN1-205ENST00000496323 DEPDC5O75140 1603 aa19.42■□□□□ 0.7
SPTBN1-205ENST00000496323 DIP2BQ9P265 1576 aa19.42■□□□□ 0.7
SPTBN1-205ENST00000496323 ATP10AO60312 1499 aa19.41■□□□□ 0.7
SPTBN1-205ENST00000496323 CCDC144AA2RUR9 1427 aa19.41■□□□□ 0.7
SPTBN1-205ENST00000496323 A2MP01023 1474 aa19.4■□□□□ 0.7
SPTBN1-205ENST00000496323 VWDEQ8N2E2 1590 aa19.39■□□□□ 0.69
SPTBN1-205ENST00000496323 HSPA5P11021 654 aaKnown RBP19.39■□□□□ 0.69
SPTBN1-205ENST00000496323 EIF2AK4Q9P2K8 1649 aaKnown RBP19.38■□□□□ 0.69
SPTBN1-205ENST00000496323 HECW2Q9P2P5 1572 aa19.38■□□□□ 0.69
SPTBN1-205ENST00000496323 MROH1Q8NDA8 1641 aa19.37■□□□□ 0.69
SPTBN1-205ENST00000496323 FRMPD1Q5SYB0 1578 aa19.37■□□□□ 0.69
SPTBN1-205ENST00000496323 UHRF1BP1Q6BDS2 1440 aa19.37■□□□□ 0.69
SPTBN1-205ENST00000496323 PRDM15P57071 1507 aaPredicted RBP19.37■□□□□ 0.69
SPTBN1-205ENST00000496323 EIF4G2P78344 907 aaKnown RBP eCLIP19.36■□□□□ 0.69
SPTBN1-205ENST00000496323 KANK1Q14678 1352 aa19.36■□□□□ 0.69
SPTBN1-205ENST00000496323 DDX10Q13206 875 aaKnown RBP19.35■□□□□ 0.69
SPTBN1-205ENST00000496323 ZNF326Q5BKZ1 582 aaKnown RBP19.33■□□□□ 0.69
SPTBN1-205ENST00000496323 DCAF11Q8TEB1 546 aa19.33■□□□□ 0.69
SPTBN1-205ENST00000496323 PTPRTO14522 1441 aa19.33■□□□□ 0.68
SPTBN1-205ENST00000496323 ABCA6Q8N139 1617 aa19.33■□□□□ 0.68
SPTBN1-205ENST00000496323 E9PCH4 1651 aa19.33■□□□□ 0.68
SPTBN1-205ENST00000496323 SPATA31E1Q6ZUB1 1445 aa19.32■□□□□ 0.68
SPTBN1-205ENST00000496323 KDM2AQ9Y2K7 1162 aa19.32■□□□□ 0.68
SPTBN1-205ENST00000496323 RICTORQ6R327 1708 aa19.31■□□□□ 0.68
SPTBN1-205ENST00000496323 RGL3Q3MIN7 710 aa19.31■□□□□ 0.68
SPTBN1-205ENST00000496323 TET3O43151 1660 aa19.3■□□□□ 0.68
SPTBN1-205ENST00000496323 YEATS2Q9ULM3 1422 aa19.29■□□□□ 0.68
SPTBN1-205ENST00000496323 RNF17Q9BXT8 1623 aaKnown RBP19.29■□□□□ 0.68
SPTBN1-205ENST00000496323 PPRC1Q5VV67 1664 aaKnown RBP19.28■□□□□ 0.68
SPTBN1-205ENST00000496323 DIP2CQ9Y2E4 1556 aa19.28■□□□□ 0.68
SPTBN1-205ENST00000496323 TRPM2O94759 1503 aa19.28■□□□□ 0.68
SPTBN1-205ENST00000496323 LMTK2Q8IWU2 1503 aa19.27■□□□□ 0.68
SPTBN1-205ENST00000496323 RALGAPBQ86X10 1494 aa19.27■□□□□ 0.68
SPTBN1-205ENST00000496323 WASHC2AQ641Q2 1341 aa19.27■□□□□ 0.67
SPTBN1-205ENST00000496323 GGT6Q6P531 493 aa19.26■□□□□ 0.67
SPTBN1-205ENST00000496323 C11orf95C9JLR9 678 aaPredicted RBP19.25■□□□□ 0.67
SPTBN1-205ENST00000496323 PRAG1Q86YV5 1406 aa19.25■□□□□ 0.67
SPTBN1-205ENST00000496323 EFCAB6Q5THR3 1501 aa19.25■□□□□ 0.67
SPTBN1-205ENST00000496323 BCORL1Q5H9F3 1711 aa19.24■□□□□ 0.67
SPTBN1-205ENST00000496323 ZMYM4Q5VZL5 1548 aa19.23■□□□□ 0.67
SPTBN1-205ENST00000496323 USP47Q96K76 1375 aa19.22■□□□□ 0.67
SPTBN1-205ENST00000496323 SPHKAPQ2M3C7 1700 aa19.21■□□□□ 0.67
SPTBN1-205ENST00000496323 CLTCL1P53675 1640 aa19.21■□□□□ 0.67
SPTBN1-205ENST00000496323 TSPOAP1O95153 1857 aa19.2■□□□□ 0.66
SPTBN1-205ENST00000496323 CARD11Q9BXL7 1154 aa19.2■□□□□ 0.66
SPTBN1-205ENST00000496323 WASHC2CQ9Y4E1 1318 aa19.19■□□□□ 0.66
SPTBN1-205ENST00000496323 ABCC3O15438 1527 aa19.19■□□□□ 0.66
SPTBN1-205ENST00000496323 NPATQ14207 1427 aa19.19■□□□□ 0.66
SPTBN1-205ENST00000496323 COL17A1Q9UMD9 1497 aaPredicted RBP19.18■□□□□ 0.66
SPTBN1-205ENST00000496323 CCDC7Q96M83 1385 aa19.18■□□□□ 0.66
SPTBN1-205ENST00000496323 KIF13AQ9H1H9 1805 aa19.18■□□□□ 0.66
SPTBN1-205ENST00000496323 UGGT1Q9NYU2 1555 aa19.17■□□□□ 0.66
SPTBN1-205ENST00000496323 ROCK2O75116 1388 aaKnown RBP19.17■□□□□ 0.66
SPTBN1-205ENST00000496323 CEP152O94986 1710 aa19.17■□□□□ 0.66
SPTBN1-205ENST00000496323 NBPF1Q3BBV0 1214 aa19.16■□□□□ 0.66
SPTBN1-205ENST00000496323 KIF7Q2M1P5 1343 aa19.15■□□□□ 0.66
SPTBN1-205ENST00000496323 GPRASP1Q5JY77 1395 aa19.14■□□□□ 0.65
SPTBN1-205ENST00000496323 TRPM1Q7Z4N2 1603 aa19.14■□□□□ 0.65
SPTBN1-205ENST00000496323 YTHDC1Q96MU7 727 aaKnown RBP19.13■□□□□ 0.65
SPTBN1-205ENST00000496323 NEURL4Q96JN8 1562 aa19.12■□□□□ 0.65
SPTBN1-205ENST00000496323 ST20-MTHFSA0A0A6YYL1 179 aa19.1■□□□□ 0.65
SPTBN1-205ENST00000496323 STAC3Q96MF2 364 aa19.09■□□□□ 0.65
SPTBN1-205ENST00000496323 CNTLNQ9NXG0 1405 aa19.09■□□□□ 0.65
SPTBN1-205ENST00000496323 ANP32CO43423 234 aa19.09■□□□□ 0.65
SPTBN1-205ENST00000496323 NOS1P29475 1434 aa19.08■□□□□ 0.65
SPTBN1-205ENST00000496323 ARHGAP31Q2M1Z3 1444 aa19.08■□□□□ 0.65
SPTBN1-205ENST00000496323 REREQ9P2R6 1566 aa19.08■□□□□ 0.64
SPTBN1-205ENST00000496323 CAMSAP1Q5T5Y3 1602 aa19.08■□□□□ 0.64
SPTBN1-205ENST00000496323 MADDQ8WXG6 1647 aa19.06■□□□□ 0.64
SPTBN1-205ENST00000496323 AGLP35573 1532 aa19.06■□□□□ 0.64
SPTBN1-205ENST00000496323 ARID4BQ4LE39 1312 aaPredicted RBP19.04■□□□□ 0.64
SPTBN1-205ENST00000496323 ADGRB3O60242 1522 aa19.04■□□□□ 0.64
SPTBN1-205ENST00000496323 LAMC1P11047 1609 aa19.03■□□□□ 0.64
SPTBN1-205ENST00000496323 ZC3H13Q5T200 1668 aaKnown RBP19.03■□□□□ 0.64
SPTBN1-205ENST00000496323 CENPBP07199 599 aaPredicted RBP19.03■□□□□ 0.64
SPTBN1-205ENST00000496323 SIGLEC1Q9BZZ2 1709 aa19.03■□□□□ 0.64
SPTBN1-205ENST00000496323 ADGRF5Q8IZF2 1346 aa19.02■□□□□ 0.64
SPTBN1-205ENST00000496323 MYOM2P54296 1465 aa19.02■□□□□ 0.63
SPTBN1-205ENST00000496323 CCER2I3L3R5 266 aa19.01■□□□□ 0.63
SPTBN1-205ENST00000496323 ARHGEF40Q8TER5 1519 aa19.01■□□□□ 0.63
SPTBN1-205ENST00000496323 SYNMO15061 1565 aa19.01■□□□□ 0.63
SPTBN1-205ENST00000496323 CHGAP10645 457 aaKnown RBP19.01■□□□□ 0.63
SPTBN1-205ENST00000496323 MROH2AA6NES4 1674 aa19■□□□□ 0.63
SPTBN1-205ENST00000496323 POLR1AO95602 1720 aaPredicted RBP19■□□□□ 0.63
SPTBN1-205ENST00000496323 PPP6R1Q9UPN7 881 aa19■□□□□ 0.63
SPTBN1-205ENST00000496323 TESK2Q96S53 571 aa18.99■□□□□ 0.63
SPTBN1-205ENST00000496323 NRXN1Q9ULB1 1477 aa18.98■□□□□ 0.63
SPTBN1-205ENST00000496323 KIF1BO60333 1816 aa18.98■□□□□ 0.63
SPTBN1-205ENST00000496323 POLR3GLQ9BT43 218 aa18.98■□□□□ 0.63
SPTBN1-205ENST00000496323 PIK3C2BO00750 1634 aa18.97■□□□□ 0.63
SPTBN1-205ENST00000496323 IDI1Q13907 227 aa18.97■□□□□ 0.63
SPTBN1-205ENST00000496323 FBXO31Q5XUX0 539 aaPredicted RBP18.97■□□□□ 0.63
SPTBN1-205ENST00000496323 CFAP70Q5T0N1 1121 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms