RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 DNMT1P26358 1616 aaKnown RBP16.2■□□□□ 0.18
SMARCAL1-213ENST00000496037 APLP2Q06481 763 aa16.19■□□□□ 0.18
SMARCAL1-213ENST00000496037 CDC42BPBQ9Y5S2 1711 aa16.19■□□□□ 0.18
SMARCAL1-213ENST00000496037 VWDEQ8N2E2 1590 aa16.18■□□□□ 0.18
SMARCAL1-213ENST00000496037 SAMD1Q6SPF0 538 aaPredicted RBP16.18■□□□□ 0.18
SMARCAL1-213ENST00000496037 PREX2Q70Z35 1606 aa16.18■□□□□ 0.18
SMARCAL1-213ENST00000496037 RNF17Q9BXT8 1623 aaKnown RBP16.18■□□□□ 0.18
SMARCAL1-213ENST00000496037 FMN1Q68DA7 1419 aa16.17■□□□□ 0.18
SMARCAL1-213ENST00000496037 POTEAQ6S8J7 498 aa16.15■□□□□ 0.18
SMARCAL1-213ENST00000496037 SAMD9LQ8IVG5 1584 aa16.15■□□□□ 0.18
SMARCAL1-213ENST00000496037 ZBTB22O15209 634 aa16.14■□□□□ 0.17
SMARCAL1-213ENST00000496037 GGT6Q6P531 493 aa16.14■□□□□ 0.17
SMARCAL1-213ENST00000496037 ANKLE2Q86XL3 938 aa16.14■□□□□ 0.17
SMARCAL1-213ENST00000496037 SPAG9O60271 1321 aaKnown RBP16.14■□□□□ 0.17
SMARCAL1-213ENST00000496037 PLXNC1O60486 1568 aa16.13■□□□□ 0.17
SMARCAL1-213ENST00000496037 SYNMO15061 1565 aa16.12■□□□□ 0.17
SMARCAL1-213ENST00000496037 NPHP4O75161 1426 aaPredicted RBP16.11■□□□□ 0.17
SMARCAL1-213ENST00000496037 SETD1AO15047 1707 aaKnown RBP16.11■□□□□ 0.17
SMARCAL1-213ENST00000496037 A2MP01023 1474 aa16.11■□□□□ 0.17
SMARCAL1-213ENST00000496037 ATP7AQ04656 1500 aa16.1■□□□□ 0.17
SMARCAL1-213ENST00000496037 LRRC7Q96NW7 1537 aa16.1■□□□□ 0.17
SMARCAL1-213ENST00000496037 TNRQ92752 1358 aa16.1■□□□□ 0.17
SMARCAL1-213ENST00000496037 CAPN15O75808 1086 aa16.09■□□□□ 0.17
SMARCAL1-213ENST00000496037 SPINK5Q9NQ38 1064 aaPredicted RBP16.09■□□□□ 0.17
SMARCAL1-213ENST00000496037 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.09■□□□□ 0.17
SMARCAL1-213ENST00000496037 SYCP2Q9BX26 1530 aa16.09■□□□□ 0.17
SMARCAL1-213ENST00000496037 MED14O60244 1454 aa16.08■□□□□ 0.16
SMARCAL1-213ENST00000496037 ZNF777Q9ULD5 760 aaPredicted RBP16.07■□□□□ 0.16
SMARCAL1-213ENST00000496037 DEPDC5O75140 1603 aa16.07■□□□□ 0.16
SMARCAL1-213ENST00000496037 SRCAPQ6ZRS2 3230 aa16.07■□□□□ 0.16
SMARCAL1-213ENST00000496037 IQGAP1P46940 1657 aa16.06■□□□□ 0.16
SMARCAL1-213ENST00000496037 THEMISQ8N1K5 641 aaPredicted RBP16.06■□□□□ 0.16
SMARCAL1-213ENST00000496037 FAM135AQ9P2D6 1515 aa16.05■□□□□ 0.16
SMARCAL1-213ENST00000496037 EEA1Q15075 1411 aa16.05■□□□□ 0.16
SMARCAL1-213ENST00000496037 INO80Q9ULG1 1556 aaPredicted RBP16.04■□□□□ 0.16
SMARCAL1-213ENST00000496037 CDC42BPAQ5VT25 1732 aa16.03■□□□□ 0.16
SMARCAL1-213ENST00000496037 UGGT1Q9NYU2 1555 aa16.03■□□□□ 0.16
SMARCAL1-213ENST00000496037 STRCP1A6NGW2 1772 aa16.02■□□□□ 0.15
SMARCAL1-213ENST00000496037 PZPP20742 1482 aa16.02■□□□□ 0.15
SMARCAL1-213ENST00000496037 NLRP1Q9C000 1473 aa16.02■□□□□ 0.15
SMARCAL1-213ENST00000496037 HNRNPMP52272 730 aaKnown RBP eCLIP16■□□□□ 0.15
SMARCAL1-213ENST00000496037 FBXO31Q5XUX0 539 aaPredicted RBP16■□□□□ 0.15
SMARCAL1-213ENST00000496037 UPF1Q92900 1129 aaKnown RBP eCLIP16■□□□□ 0.15
SMARCAL1-213ENST00000496037 ADGBQ8N7X0 1667 aa15.99■□□□□ 0.15
SMARCAL1-213ENST00000496037 LRRIQ1Q96JM4 1722 aa15.99■□□□□ 0.15
SMARCAL1-213ENST00000496037 CCDC18Q5T9S5 1454 aa15.98■□□□□ 0.15
SMARCAL1-213ENST00000496037 PLEKHH2Q8IVE3 1493 aa15.98■□□□□ 0.15
SMARCAL1-213ENST00000496037 FAM135BQ49AJ0 1406 aa15.98■□□□□ 0.15
SMARCAL1-213ENST00000496037 ARHGAP35Q9NRY4 1499 aa15.97■□□□□ 0.15
SMARCAL1-213ENST00000496037 KIAA1107Q9UPP5 1409 aa15.97■□□□□ 0.15
SMARCAL1-213ENST00000496037 KDM5DQ9BY66 1539 aa15.97■□□□□ 0.15
SMARCAL1-213ENST00000496037 MIA2Q96PC5 1412 aa15.96■□□□□ 0.15
SMARCAL1-213ENST00000496037 ZNF219Q9P2Y4 722 aaPredicted RBP15.96■□□□□ 0.15
SMARCAL1-213ENST00000496037 GPATCH8Q9UKJ3 1502 aaKnown RBP15.92■□□□□ 0.14
SMARCAL1-213ENST00000496037 WASHC2CQ9Y4E1 1318 aa15.92■□□□□ 0.14
SMARCAL1-213ENST00000496037 TRIM52Q96A61 297 aa15.91■□□□□ 0.14
SMARCAL1-213ENST00000496037 ZC3H13Q5T200 1668 aaKnown RBP15.9■□□□□ 0.14
SMARCAL1-213ENST00000496037 ROBO1Q9Y6N7 1651 aa15.9■□□□□ 0.14
SMARCAL1-213ENST00000496037 UBTFP17480 764 aaKnown RBP15.9■□□□□ 0.14
SMARCAL1-213ENST00000496037 CFDP1Q9UEE9 299 aaPredicted RBP15.9■□□□□ 0.14
SMARCAL1-213ENST00000496037 DHX29Q7Z478 1369 aaKnown RBP15.89■□□□□ 0.13
SMARCAL1-213ENST00000496037 KIF3BO15066 747 aa15.89■□□□□ 0.13
SMARCAL1-213ENST00000496037 LRRC9Q6ZRR7 1453 aa15.88■□□□□ 0.13
SMARCAL1-213ENST00000496037 JCADQ9P266 1359 aa15.87■□□□□ 0.13
SMARCAL1-213ENST00000496037 SCAF11Q99590 1463 aaKnown RBP15.87■□□□□ 0.13
SMARCAL1-213ENST00000496037 ZNF772Q68DY9 489 aaPredicted RBP15.87■□□□□ 0.13
SMARCAL1-213ENST00000496037 XIRP1Q702N8 1843 aaKnown RBP15.87■□□□□ 0.13
SMARCAL1-213ENST00000496037 CASKIN1Q8WXD9 1431 aa15.86■□□□□ 0.13
SMARCAL1-213ENST00000496037 DSG3P32926 999 aa15.86■□□□□ 0.13
SMARCAL1-213ENST00000496037 MEX3CQ5U5Q3 659 aaKnown RBP15.85■□□□□ 0.13
SMARCAL1-213ENST00000496037 RTEL1-TNFRSF6BF6WH68 1400 aa15.85■□□□□ 0.13
SMARCAL1-213ENST00000496037 AMER1Q5JTC6 1135 aaPredicted RBP15.84■□□□□ 0.13
SMARCAL1-213ENST00000496037 CCNB3Q8WWL7 1395 aa15.84■□□□□ 0.13
SMARCAL1-213ENST00000496037 TMEM94Q12767 1356 aa15.83■□□□□ 0.12
SMARCAL1-213ENST00000496037 PHLPP1O60346 1717 aa15.82■□□□□ 0.12
SMARCAL1-213ENST00000496037 RXRBP28702 533 aa15.8■□□□□ 0.12
SMARCAL1-213ENST00000496037 ATXN8OSP0DMR3 200 aa15.79■□□□□ 0.12
SMARCAL1-213ENST00000496037 TXNDC2Q86VQ3 553 aa15.79■□□□□ 0.12
SMARCAL1-213ENST00000496037 ERVK-7P63135 1459 aa15.78■□□□□ 0.12
SMARCAL1-213ENST00000496037 FYCO1Q9BQS8 1478 aa15.78■□□□□ 0.12
SMARCAL1-213ENST00000496037 SPATA31A6Q5VVP1 1343 aa15.78■□□□□ 0.12
SMARCAL1-213ENST00000496037 UBR1Q8IWV7 1749 aa15.78■□□□□ 0.12
SMARCAL1-213ENST00000496037 EID1Q9Y6B2 187 aa15.78■□□□□ 0.12
SMARCAL1-213ENST00000496037 LRP6O75581 1613 aa15.78■□□□□ 0.12
SMARCAL1-213ENST00000496037 MAP3K1Q13233 1512 aa15.78■□□□□ 0.12
SMARCAL1-213ENST00000496037 CDK12Q9NYV4 1490 aaPredicted RBP15.78■□□□□ 0.12
SMARCAL1-213ENST00000496037 MBD5Q9P267 1494 aa15.78■□□□□ 0.12
SMARCAL1-213ENST00000496037 LTKP29376 864 aa15.76■□□□□ 0.11
SMARCAL1-213ENST00000496037 SLIT1O75093 1534 aa15.76■□□□□ 0.11
SMARCAL1-213ENST00000496037 ARHGAP23Q9P227 1491 aa15.76■□□□□ 0.11
SMARCAL1-213ENST00000496037 MSH6P52701 1360 aa15.75■□□□□ 0.11
SMARCAL1-213ENST00000496037 ZNF644Q9H582 1327 aaPredicted RBP15.75■□□□□ 0.11
SMARCAL1-213ENST00000496037 PROSER2Q86WR7 435 aaPredicted RBP15.75■□□□□ 0.11
SMARCAL1-213ENST00000496037 ATF5Q9Y2D1 282 aaPredicted RBP15.75■□□□□ 0.11
SMARCAL1-213ENST00000496037 FGD6Q6ZV73 1430 aa15.75■□□□□ 0.11
SMARCAL1-213ENST00000496037 NCOA2Q15596 1464 aa15.74■□□□□ 0.11
SMARCAL1-213ENST00000496037 COL16A1Q07092 1604 aaPredicted RBP15.74■□□□□ 0.11
SMARCAL1-213ENST00000496037 ABCC3O15438 1527 aa15.73■□□□□ 0.11
SMARCAL1-213ENST00000496037 CCDC141Q6ZP82 1450 aa15.73■□□□□ 0.11
SMARCAL1-213ENST00000496037 ABCB7O75027 752 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms