RNA–Protein interactions for RNA: ENST00000495471.1

CCNL1-225, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-225ENST00000495471 VPS9D1Q9Y2B5 631 aa10.87□□□□□ -0.67
CCNL1-225ENST00000495471 ZBED2Q9BTP6 218 aa10.86□□□□□ -0.67
CCNL1-225ENST00000495471 NBR1Q14596 966 aa10.85□□□□□ -0.67
CCNL1-225ENST00000495471 RBM33Q96EV2 1170 aaKnown RBP10.85□□□□□ -0.67
CCNL1-225ENST00000495471 SLC4A5Q9BY07 1137 aa10.85□□□□□ -0.67
CCNL1-225ENST00000495471 PPP1R3GB7ZBB8 358 aa10.84□□□□□ -0.67
CCNL1-225ENST00000495471 COL9A1P20849 921 aa10.84□□□□□ -0.67
CCNL1-225ENST00000495471 HAP1P54257 671 aaPredicted RBP10.84□□□□□ -0.67
CCNL1-225ENST00000495471 C6orf132Q5T0Z8 1188 aa10.82□□□□□ -0.68
CCNL1-225ENST00000495471 ARHGEF1Q92888 912 aaKnown RBP10.82□□□□□ -0.68
CCNL1-225ENST00000495471 GRXCR2A6NFK2 248 aa10.81□□□□□ -0.68
CCNL1-225ENST00000495471 PRIM1P49642 420 aaKnown RBP10.81□□□□□ -0.68
CCNL1-225ENST00000495471 EN1Q05925 392 aaPredicted RBP10.81□□□□□ -0.68
CCNL1-225ENST00000495471 MAP3K7O43318 606 aa10.79□□□□□ -0.68
CCNL1-225ENST00000495471 TSR1Q2NL82 804 aaKnown RBP10.79□□□□□ -0.68
CCNL1-225ENST00000495471 PROX2Q3B8N5 592 aa10.79□□□□□ -0.68
CCNL1-225ENST00000495471 BHMG1C9JSJ3 638 aaPredicted RBP10.77□□□□□ -0.69
CCNL1-225ENST00000495471 STAC3Q96MF2 364 aa10.77□□□□□ -0.69
CCNL1-225ENST00000495471 OSBPP22059 807 aa10.76□□□□□ -0.69
CCNL1-225ENST00000495471 P3H3Q8IVL6 736 aa10.76□□□□□ -0.69
CCNL1-225ENST00000495471 KDM2AQ9Y2K7 1162 aa10.74□□□□□ -0.69
CCNL1-225ENST00000495471 MLLT3P42568 568 aaPredicted RBP10.73□□□□□ -0.69
CCNL1-225ENST00000495471 KCTD12Q96CX2 325 aaKnown RBP10.73□□□□□ -0.69
CCNL1-225ENST00000495471 RABGEF1Q9UJ41 708 aa10.73□□□□□ -0.69
CCNL1-225ENST00000495471 MRPL50Q8N5N7 158 aaKnown RBP10.71□□□□□ -0.69
CCNL1-225ENST00000495471 NBPF3Q9H094 633 aa10.71□□□□□ -0.69
CCNL1-225ENST00000495471 CDHR5Q9HBB8 845 aa10.71□□□□□ -0.69
CCNL1-225ENST00000495471 TRIM6-TRIM34B2RNG4 842 aa10.7□□□□□ -0.7
CCNL1-225ENST00000495471 KIAA1468Q9P260 1216 aa10.7□□□□□ -0.7
CCNL1-225ENST00000495471 ONECUT3O60422 494 aaPredicted RBP10.68□□□□□ -0.7
CCNL1-225ENST00000495471 HCSTQ9UBK5 93 aa10.67□□□□□ -0.7
CCNL1-225ENST00000495471 TSKSQ9UJT2 592 aa10.67□□□□□ -0.7
CCNL1-225ENST00000495471 GOLGA8CPA6NN73 597 aa10.66□□□□□ -0.7
CCNL1-225ENST00000495471 SEMA3EO15041 775 aa10.66□□□□□ -0.7
CCNL1-225ENST00000495471 CERKQ8TCT0 537 aa10.65□□□□□ -0.7
CCNL1-225ENST00000495471 WNT2BQ93097 391 aa10.65□□□□□ -0.7
CCNL1-225ENST00000495471 CDCA7LQ96GN5 454 aa10.65□□□□□ -0.7
CCNL1-225ENST00000495471 SEPT9Q9UHD8 586 aaPredicted RBP10.65□□□□□ -0.7
CCNL1-225ENST00000495471 PRSS12P56730 875 aa10.64□□□□□ -0.71
CCNL1-225ENST00000495471 FAM198AQ9UFP1 575 aa10.64□□□□□ -0.71
CCNL1-225ENST00000495471 THSD4Q6ZMP0 1018 aa10.63□□□□□ -0.71
CCNL1-225ENST00000495471 VSIG10Q8N0Z9 540 aa10.63□□□□□ -0.71
CCNL1-225ENST00000495471 NPDC1Q9NQX5 325 aaPredicted RBP10.63□□□□□ -0.71
CCNL1-225ENST00000495471 LAPTM4BQ86VI4 370 aa10.62□□□□□ -0.71
CCNL1-225ENST00000495471 PTPN5P54829 565 aa10.61□□□□□ -0.71
CCNL1-225ENST00000495471 PACS2Q86VP3 889 aa10.61□□□□□ -0.71
CCNL1-225ENST00000495471 C3orf80F5H4A9 247 aa10.6□□□□□ -0.71
CCNL1-225ENST00000495471 ZFRQ96KR1 1074 aaKnown RBP10.6□□□□□ -0.71
CCNL1-225ENST00000495471 FAM98CQ17RN3 349 aaKnown RBP10.59□□□□□ -0.71
CCNL1-225ENST00000495471 ANKK1Q8NFD2 765 aa10.59□□□□□ -0.71
CCNL1-225ENST00000495471 TESPA1A2RU30 521 aaPredicted RBP10.58□□□□□ -0.72
CCNL1-225ENST00000495471 SMAPO00193 183 aa10.58□□□□□ -0.72
CCNL1-225ENST00000495471 RBM27Q9P2N5 1060 aaKnown RBP10.58□□□□□ -0.72
CCNL1-225ENST00000495471 PADI6Q6TGC4 694 aa10.57□□□□□ -0.72
CCNL1-225ENST00000495471 BCAMP50895 628 aa10.56□□□□□ -0.72
CCNL1-225ENST00000495471 TTC13Q8NBP0 860 aa10.56□□□□□ -0.72
CCNL1-225ENST00000495471 NUTM2FA1L443 756 aa10.55□□□□□ -0.72
CCNL1-225ENST00000495471 PTGDRQ13258 359 aa10.55□□□□□ -0.72
CCNL1-225ENST00000495471 TATDN2Q93075 761 aa10.55□□□□□ -0.72
CCNL1-225ENST00000495471 PNMA3Q9UL41 463 aa10.55□□□□□ -0.72
CCNL1-225ENST00000495471 SOWAHBA6NEL2 793 aa10.54□□□□□ -0.72
CCNL1-225ENST00000495471 NBPF26B4DH59 902 aa10.54□□□□□ -0.72
CCNL1-225ENST00000495471 NUDT18Q6ZVK8 323 aa10.52□□□□□ -0.73
CCNL1-225ENST00000495471 PLA2G2EQ9NZK7 142 aa10.52□□□□□ -0.73
CCNL1-225ENST00000495471 RBM26Q5T8P6 1007 aaKnown RBP10.51□□□□□ -0.73
CCNL1-225ENST00000495471 LRCH3Q96II8 777 aa10.5□□□□□ -0.73
CCNL1-225ENST00000495471 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.5□□□□□ -0.73
CCNL1-225ENST00000495471 SMYD5Q6GMV2 418 aa10.49□□□□□ -0.73
CCNL1-225ENST00000495471 SAMD7Q7Z3H4 446 aa10.48□□□□□ -0.73
CCNL1-225ENST00000495471 WBP1LQ9NX94 342 aa10.48□□□□□ -0.73
CCNL1-225ENST00000495471 FCHSD2O94868 740 aa10.47□□□□□ -0.73
CCNL1-225ENST00000495471 HPS5Q9UPZ3 1129 aa10.47□□□□□ -0.73
CCNL1-225ENST00000495471 EYA1Q99502 592 aa10.45□□□□□ -0.74
CCNL1-225ENST00000495471 TSR3Q9UJK0 312 aaKnown RBP10.44□□□□□ -0.74
CCNL1-225ENST00000495471 GPR37O15354 613 aa10.43□□□□□ -0.74
CCNL1-225ENST00000495471 FAM161AQ3B820 660 aa10.43□□□□□ -0.74
CCNL1-225ENST00000495471 ADGRG1Q9Y653 693 aa10.43□□□□□ -0.74
CCNL1-225ENST00000495471 HIC1Q14526 733 aa10.41□□□□□ -0.74
CCNL1-225ENST00000495471 NYAP1Q6ZVC0 841 aa10.41□□□□□ -0.74
CCNL1-225ENST00000495471 SWT1Q5T5J6 900 aaKnown RBP10.4□□□□□ -0.74
CCNL1-225ENST00000495471 RNF40O75150 1001 aa10.39□□□□□ -0.75
CCNL1-225ENST00000495471 PPP4CP60510 307 aa10.39□□□□□ -0.75
CCNL1-225ENST00000495471 FECHP22830 423 aa10.38□□□□□ -0.75
CCNL1-225ENST00000495471 HDGFP51858 240 aaKnown RBP10.38□□□□□ -0.75
CCNL1-225ENST00000495471 RBM46Q8TBY0 533 aaKnown RBP10.38□□□□□ -0.75
CCNL1-225ENST00000495471 GNPATO15228 680 aa10.37□□□□□ -0.75
CCNL1-225ENST00000495471 GPIHBP1Q8IV16 184 aa10.37□□□□□ -0.75
CCNL1-225ENST00000495471 ITGBL1O95965 494 aaPredicted RBP10.36□□□□□ -0.75
CCNL1-225ENST00000495471 DNAJB2P25686 324 aa10.36□□□□□ -0.75
CCNL1-225ENST00000495471 RCCD1A6NED2 376 aa10.35□□□□□ -0.75
CCNL1-225ENST00000495471 IFFO2Q5TF58 517 aa10.35□□□□□ -0.75
CCNL1-225ENST00000495471 SLF2Q8IX21 1173 aa10.34□□□□□ -0.75
CCNL1-225ENST00000495471 TMEM134Q9H6X4 195 aa10.34□□□□□ -0.75
CCNL1-225ENST00000495471 PXYLP1Q8TE99 480 aa10.33□□□□□ -0.76
CCNL1-225ENST00000495471 APLP1P51693 650 aa10.32□□□□□ -0.76
CCNL1-225ENST00000495471 TULP1O00294 542 aaPredicted RBP10.31□□□□□ -0.76
CCNL1-225ENST00000495471 OATP04181 439 aa10.31□□□□□ -0.76
CCNL1-225ENST00000495471 METTL3Q86U44 580 aaKnown RBP10.31□□□□□ -0.76
CCNL1-225ENST00000495471 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.29□□□□□ -0.76
CCNL1-225ENST00000495471 A0A0G2JS52 829 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms