RNA–Protein interactions for RNA: ENST00000495399.1

C9orf135-204, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 2

Gene C9orf135, Length 502 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-204ENST00000495399 MYO5CQ9NQX4 1742 aa12.83□□□□□ -0.36
C9orf135-204ENST00000495399 PTPRKQ15262 1439 aa12.83□□□□□ -0.36
C9orf135-204ENST00000495399 EFCAB2Q5VUJ9 269 aa12.83□□□□□ -0.36
C9orf135-204ENST00000495399 KIDINS220Q9ULH0 1771 aa12.8□□□□□ -0.36
C9orf135-204ENST00000495399 CDK13Q14004 1512 aaKnown RBP12.8□□□□□ -0.36
C9orf135-204ENST00000495399 DNMT1P26358 1616 aaKnown RBP12.8□□□□□ -0.36
C9orf135-204ENST00000495399 ESF1Q9H501 851 aaKnown RBP12.79□□□□□ -0.36
C9orf135-204ENST00000495399 POLR1AO95602 1720 aaPredicted RBP12.79□□□□□ -0.36
C9orf135-204ENST00000495399 STRCP1A6NGW2 1772 aa12.79□□□□□ -0.36
C9orf135-204ENST00000495399 KIF14Q15058 1648 aa12.77□□□□□ -0.37
C9orf135-204ENST00000495399 CLTCQ00610 1675 aaKnown RBP12.77□□□□□ -0.37
C9orf135-204ENST00000495399 FOXD4L1Q9NU39 408 aa12.76□□□□□ -0.37
C9orf135-204ENST00000495399 SRCAPQ6ZRS2 3230 aa12.76□□□□□ -0.37
C9orf135-204ENST00000495399 A2ML1A8K2U0 1454 aa12.75□□□□□ -0.37
C9orf135-204ENST00000495399 UPF1Q92900 1129 aaKnown RBP eCLIP12.75□□□□□ -0.37
C9orf135-204ENST00000495399 CDC42BPBQ9Y5S2 1711 aa12.74□□□□□ -0.37
C9orf135-204ENST00000495399 LRRC7Q96NW7 1537 aa12.73□□□□□ -0.37
C9orf135-204ENST00000495399 PRKAR2AP13861 404 aaKnown RBP12.73□□□□□ -0.37
C9orf135-204ENST00000495399 RNF17Q9BXT8 1623 aaKnown RBP12.72□□□□□ -0.37
C9orf135-204ENST00000495399 ABCC1P33527 1531 aa12.72□□□□□ -0.37
C9orf135-204ENST00000495399 ARHGAP5Q13017 1502 aa12.72□□□□□ -0.37
C9orf135-204ENST00000495399 ITSN2Q9NZM3 1697 aa12.71□□□□□ -0.37
C9orf135-204ENST00000495399 LHX8Q68G74 356 aa12.7□□□□□ -0.38
C9orf135-204ENST00000495399 MYT1LQ9UL68 1186 aa12.7□□□□□ -0.38
C9orf135-204ENST00000495399 MED14O60244 1454 aa12.7□□□□□ -0.38
C9orf135-204ENST00000495399 PLXNC1O60486 1568 aa12.68□□□□□ -0.38
C9orf135-204ENST00000495399 XIRP1Q702N8 1843 aaKnown RBP12.67□□□□□ -0.38
C9orf135-204ENST00000495399 CLEC11AQ9Y240 323 aa12.67□□□□□ -0.38
C9orf135-204ENST00000495399 DEPDC5O75140 1603 aa12.66□□□□□ -0.38
C9orf135-204ENST00000495399 SYNMO15061 1565 aa12.66□□□□□ -0.38
C9orf135-204ENST00000495399 SPDYE2BA6NHP3 402 aa12.66□□□□□ -0.38
C9orf135-204ENST00000495399 SPDYE6P0CI01 402 aa12.66□□□□□ -0.38
C9orf135-204ENST00000495399 SPDYE2Q495Y8 402 aa12.66□□□□□ -0.38
C9orf135-204ENST00000495399 SAMD9LQ8IVG5 1584 aa12.65□□□□□ -0.38
C9orf135-204ENST00000495399 NPHP4O75161 1426 aaPredicted RBP12.64□□□□□ -0.39
C9orf135-204ENST00000495399 PREX2Q70Z35 1606 aa12.64□□□□□ -0.39
C9orf135-204ENST00000495399 TROQ12816 1431 aaPredicted RBP12.63□□□□□ -0.39
C9orf135-204ENST00000495399 C19orf67A6NJJ6 358 aa12.63□□□□□ -0.39
C9orf135-204ENST00000495399 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.63□□□□□ -0.39
C9orf135-204ENST00000495399 FAM135BQ49AJ0 1406 aa12.62□□□□□ -0.39
C9orf135-204ENST00000495399 IQGAP1P46940 1657 aa12.62□□□□□ -0.39
C9orf135-204ENST00000495399 GABBR2O75899 941 aa12.62□□□□□ -0.39
C9orf135-204ENST00000495399 ANKLE2Q86XL3 938 aa12.62□□□□□ -0.39
C9orf135-204ENST00000495399 SPDYE1Q8NFV5 336 aaPredicted RBP12.62□□□□□ -0.39
C9orf135-204ENST00000495399 RANGAP1P46060 587 aaPredicted RBP12.61□□□□□ -0.39
C9orf135-204ENST00000495399 ZC3H13Q5T200 1668 aaKnown RBP12.61□□□□□ -0.39
C9orf135-204ENST00000495399 FBXO31Q5XUX0 539 aaPredicted RBP12.6□□□□□ -0.39
C9orf135-204ENST00000495399 SLC4A1APQ9BWU0 796 aaKnown RBP12.6□□□□□ -0.39
C9orf135-204ENST00000495399 LRRIQ1Q96JM4 1722 aa12.59□□□□□ -0.39
C9orf135-204ENST00000495399 A2MP01023 1474 aa12.58□□□□□ -0.4
C9orf135-204ENST00000495399 TNRQ92752 1358 aa12.57□□□□□ -0.4
C9orf135-204ENST00000495399 INO80Q9ULG1 1556 aaPredicted RBP12.57□□□□□ -0.4
C9orf135-204ENST00000495399 GGT6Q6P531 493 aa12.57□□□□□ -0.4
C9orf135-204ENST00000495399 CDC42BPAQ5VT25 1732 aa12.57□□□□□ -0.4
C9orf135-204ENST00000495399 ATP7AQ04656 1500 aa12.56□□□□□ -0.4
C9orf135-204ENST00000495399 ROBO1Q9Y6N7 1651 aa12.55□□□□□ -0.4
C9orf135-204ENST00000495399 PZPP20742 1482 aa12.54□□□□□ -0.4
C9orf135-204ENST00000495399 THEMISQ8N1K5 641 aaPredicted RBP12.54□□□□□ -0.4
C9orf135-204ENST00000495399 CSRNP3Q8WYN3 585 aa12.54□□□□□ -0.4
C9orf135-204ENST00000495399 CDK11AQ9UQ88 783 aaPredicted RBP12.54□□□□□ -0.4
C9orf135-204ENST00000495399 UGGT1Q9NYU2 1555 aa12.54□□□□□ -0.4
C9orf135-204ENST00000495399 SPAG9O60271 1321 aaKnown RBP12.53□□□□□ -0.4
C9orf135-204ENST00000495399 SYCP2Q9BX26 1530 aa12.52□□□□□ -0.4
C9orf135-204ENST00000495399 LRP6O75581 1613 aa12.52□□□□□ -0.4
C9orf135-204ENST00000495399 MIA2Q96PC5 1412 aa12.52□□□□□ -0.41
C9orf135-204ENST00000495399 NLRP1Q9C000 1473 aa12.52□□□□□ -0.41
C9orf135-204ENST00000495399 TRIM52Q96A61 297 aa12.51□□□□□ -0.41
C9orf135-204ENST00000495399 CLIP1P30622 1438 aa12.51□□□□□ -0.41
C9orf135-204ENST00000495399 FAM135AQ9P2D6 1515 aa12.5□□□□□ -0.41
C9orf135-204ENST00000495399 ADGBQ8N7X0 1667 aa12.49□□□□□ -0.41
C9orf135-204ENST00000495399 CDK12Q9NYV4 1490 aaPredicted RBP12.49□□□□□ -0.41
C9orf135-204ENST00000495399 HNRNPMP52272 730 aaKnown RBP eCLIP12.49□□□□□ -0.41
C9orf135-204ENST00000495399 PLSCR2Q9NRY7 297 aa12.48□□□□□ -0.41
C9orf135-204ENST00000495399 MAP3K1Q13233 1512 aa12.47□□□□□ -0.41
C9orf135-204ENST00000495399 KDM5DQ9BY66 1539 aa12.47□□□□□ -0.41
C9orf135-204ENST00000495399 JCADQ9P266 1359 aa12.47□□□□□ -0.41
C9orf135-204ENST00000495399 ATP1B4Q9UN42 357 aaPredicted RBP12.47□□□□□ -0.41
C9orf135-204ENST00000495399 SETBP1Q9Y6X0 1596 aa12.47□□□□□ -0.41
C9orf135-204ENST00000495399 FMN1Q68DA7 1419 aa12.46□□□□□ -0.41
C9orf135-204ENST00000495399 KIAA1107Q9UPP5 1409 aa12.46□□□□□ -0.41
C9orf135-204ENST00000495399 PHLPP1O60346 1717 aa12.46□□□□□ -0.41
C9orf135-204ENST00000495399 COL16A1Q07092 1604 aaPredicted RBP12.46□□□□□ -0.41
C9orf135-204ENST00000495399 GPATCH8Q9UKJ3 1502 aaKnown RBP12.45□□□□□ -0.42
C9orf135-204ENST00000495399 ZNF772Q68DY9 489 aaPredicted RBP12.44□□□□□ -0.42
C9orf135-204ENST00000495399 ZNF692Q9BU19 519 aaPredicted RBP12.44□□□□□ -0.42
C9orf135-204ENST00000495399 ARHGAP35Q9NRY4 1499 aa12.44□□□□□ -0.42
C9orf135-204ENST00000495399 TMEM94Q12767 1356 aa12.43□□□□□ -0.42
C9orf135-204ENST00000495399 LTKP29376 864 aa12.43□□□□□ -0.42
C9orf135-204ENST00000495399 CHADLQ6NUI6 762 aa12.43□□□□□ -0.42
C9orf135-204ENST00000495399 UBR1Q8IWV7 1749 aa12.42□□□□□ -0.42
C9orf135-204ENST00000495399 NCOA2Q15596 1464 aa12.42□□□□□ -0.42
C9orf135-204ENST00000495399 ARHGAP23Q9P227 1491 aa12.42□□□□□ -0.42
C9orf135-204ENST00000495399 RXRBP28702 533 aa12.42□□□□□ -0.42
C9orf135-204ENST00000495399 ZNF777Q9ULD5 760 aaPredicted RBP12.42□□□□□ -0.42
C9orf135-204ENST00000495399 DHX29Q7Z478 1369 aaKnown RBP12.42□□□□□ -0.42
C9orf135-204ENST00000495399 SCAF11Q99590 1463 aaKnown RBP12.41□□□□□ -0.42
C9orf135-204ENST00000495399 ATXN8OSP0DMR3 200 aa12.41□□□□□ -0.42
C9orf135-204ENST00000495399 LRRC9Q6ZRR7 1453 aa12.4□□□□□ -0.42
C9orf135-204ENST00000495399 SPATA31A6Q5VVP1 1343 aa12.39□□□□□ -0.43
C9orf135-204ENST00000495399 RGS12O14924 1447 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms