RNA–Protein interactions for RNA: ENST00000494977.1

FGD4-208, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 2

Gene FGD4, Length 2,349 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-208ENST00000494977 TMC1Q8TDI8 760 aa7.97□□□□□ -1.13
FGD4-208ENST00000494977 GEMIN8Q9NWZ8 242 aaKnown RBP7.97□□□□□ -1.13
FGD4-208ENST00000494977 FHAD1B1AJZ9 1412 aa7.97□□□□□ -1.13
FGD4-208ENST00000494977 KTN1Q86UP2 1357 aaKnown RBP7.97□□□□□ -1.13
FGD4-208ENST00000494977 PATL2C9JE40 543 aaKnown RBP7.96□□□□□ -1.13
FGD4-208ENST00000494977 ZNF500O60304 480 aaPredicted RBP7.96□□□□□ -1.13
FGD4-208ENST00000494977 PSEN1P49768 467 aa7.96□□□□□ -1.13
FGD4-208ENST00000494977 CBX1P83916 185 aa7.96□□□□□ -1.13
FGD4-208ENST00000494977 PPP1R9BQ96SB3 815 aa7.96□□□□□ -1.13
FGD4-208ENST00000494977 NCOA2Q15596 1464 aa7.96□□□□□ -1.14
FGD4-208ENST00000494977 ZBTB22O15209 634 aa7.96□□□□□ -1.14
FGD4-208ENST00000494977 RALBP1Q15311 655 aa7.96□□□□□ -1.14
FGD4-208ENST00000494977 CC2D1BQ5T0F9 858 aaKnown RBP7.96□□□□□ -1.14
FGD4-208ENST00000494977 CCNB3Q8WWL7 1395 aa7.95□□□□□ -1.14
FGD4-208ENST00000494977 DDX11L8A8MPP1 907 aa7.95□□□□□ -1.14
FGD4-208ENST00000494977 KCNJ4P48050 445 aa7.95□□□□□ -1.14
FGD4-208ENST00000494977 NBPF1Q3BBV0 1214 aa7.95□□□□□ -1.14
FGD4-208ENST00000494977 C8orf34Q49A92 452 aa7.95□□□□□ -1.14
FGD4-208ENST00000494977 GRIPAP1Q4V328 841 aa7.95□□□□□ -1.14
FGD4-208ENST00000494977 ZNF771Q7L3S4 317 aaPredicted RBP7.95□□□□□ -1.14
FGD4-208ENST00000494977 SLKQ9H2G2 1235 aaPredicted RBP7.95□□□□□ -1.14
FGD4-208ENST00000494977 TONSLQ96HA7 1378 aa7.95□□□□□ -1.14
FGD4-208ENST00000494977 AEBP1Q8IUX7 1158 aa7.95□□□□□ -1.14
FGD4-208ENST00000494977 SOGA1O94964 1423 aa7.94□□□□□ -1.14
FGD4-208ENST00000494977 SETD5Q9C0A6 1442 aa7.94□□□□□ -1.14
FGD4-208ENST00000494977 POLR3GLQ9BT43 218 aa7.94□□□□□ -1.14
FGD4-208ENST00000494977 ANTXR1Q9H6X2 564 aa7.94□□□□□ -1.14
FGD4-208ENST00000494977 CCDC88BA6NC98 1476 aa7.94□□□□□ -1.14
FGD4-208ENST00000494977 SLC52A1Q9NWF4 448 aa7.94□□□□□ -1.14
FGD4-208ENST00000494977 PHF14O94880 888 aa7.93□□□□□ -1.14
FGD4-208ENST00000494977 MYCNP04198 464 aaPredicted RBP7.93□□□□□ -1.14
FGD4-208ENST00000494977 MCM5P33992 734 aa7.93□□□□□ -1.14
FGD4-208ENST00000494977 TIGD1Q96MW7 591 aa7.93□□□□□ -1.14
FGD4-208ENST00000494977 EIF4G1Q04637 1599 aaKnown RBP7.93□□□□□ -1.14
FGD4-208ENST00000494977 MCCP23508 829 aa7.92□□□□□ -1.14
FGD4-208ENST00000494977 CENPQQ7L2Z9 268 aaPredicted RBP7.92□□□□□ -1.14
FGD4-208ENST00000494977 CERS3Q8IU89 383 aa7.92□□□□□ -1.14
FGD4-208ENST00000494977 RCAN3Q9UKA8 241 aa7.92□□□□□ -1.14
FGD4-208ENST00000494977 KIF3AQ9Y496 699 aa7.92□□□□□ -1.14
FGD4-208ENST00000494977 ERICH3Q5RHP9 1530 aa7.92□□□□□ -1.14
FGD4-208ENST00000494977 NOL7Q9UMY1 257 aaKnown RBP7.92□□□□□ -1.14
FGD4-208ENST00000494977 KIF21BO75037 1637 aa7.92□□□□□ -1.14
FGD4-208ENST00000494977 SOX12O15370 315 aa7.91□□□□□ -1.14
FGD4-208ENST00000494977 TICAM2Q86XR7 235 aa7.91□□□□□ -1.14
FGD4-208ENST00000494977 EFCC1Q9HA90 598 aa7.91□□□□□ -1.14
FGD4-208ENST00000494977 CCDC9Q9Y3X0 531 aaKnown RBP7.91□□□□□ -1.14
FGD4-208ENST00000494977 NINLQ9Y2I6 1382 aa7.91□□□□□ -1.14
FGD4-208ENST00000494977 SKOR2Q2VWA4 1001 aaPredicted RBP7.91□□□□□ -1.14
FGD4-208ENST00000494977 VIRMAQ69YN4 1812 aaKnown RBP7.9□□□□□ -1.14
FGD4-208ENST00000494977 HMGN5P82970 282 aaKnown RBP7.9□□□□□ -1.14
FGD4-208ENST00000494977 GABPB1Q06547 395 aaPredicted RBP7.9□□□□□ -1.14
FGD4-208ENST00000494977 NASPP49321 788 aaPredicted RBP7.9□□□□□ -1.15
FGD4-208ENST00000494977 CEP120Q8N960 986 aa7.9□□□□□ -1.15
FGD4-208ENST00000494977 MYRIPQ8NFW9 859 aa7.9□□□□□ -1.15
FGD4-208ENST00000494977 CHMP5Q9NZZ3 219 aa7.9□□□□□ -1.15
FGD4-208ENST00000494977 CALCOCO1Q9P1Z2 691 aa7.9□□□□□ -1.15
FGD4-208ENST00000494977 NGEFQ8N5V2 710 aa7.89□□□□□ -1.15
FGD4-208ENST00000494977 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.89□□□□□ -1.15
FGD4-208ENST00000494977 TRIM6-TRIM34B2RNG4 842 aa7.89□□□□□ -1.15
FGD4-208ENST00000494977 PRIMPOLQ96LW4 560 aa7.89□□□□□ -1.15
FGD4-208ENST00000494977 TRIM34Q9BYJ4 488 aa7.89□□□□□ -1.15
FGD4-208ENST00000494977 XPCQ01831 940 aaPredicted RBP7.88□□□□□ -1.15
FGD4-208ENST00000494977 FEZ1Q99689 392 aa7.88□□□□□ -1.15
FGD4-208ENST00000494977 TULP2O00295 520 aa7.87□□□□□ -1.15
FGD4-208ENST00000494977 ATP2B3Q16720 1220 aa7.87□□□□□ -1.15
FGD4-208ENST00000494977 P3H3Q8IVL6 736 aa7.87□□□□□ -1.15
FGD4-208ENST00000494977 UPF2Q9HAU5 1272 aaKnown RBP7.87□□□□□ -1.15
FGD4-208ENST00000494977 KDM2BQ8NHM5 1336 aa7.87□□□□□ -1.15
FGD4-208ENST00000494977 TNNT3P45378 269 aaPredicted RBP7.87□□□□□ -1.15
FGD4-208ENST00000494977 RBM25P49756 843 aaKnown RBP7.87□□□□□ -1.15
FGD4-208ENST00000494977 LMOD3Q0VAK6 560 aa7.87□□□□□ -1.15
FGD4-208ENST00000494977 PDE3BQ13370 1112 aa7.87□□□□□ -1.15
FGD4-208ENST00000494977 PLCD4Q9BRC7 762 aa7.87□□□□□ -1.15
FGD4-208ENST00000494977 CARD10Q9BWT7 1032 aa7.87□□□□□ -1.15
FGD4-208ENST00000494977 GTF2F1P35269 517 aaKnown RBP eCLIP7.86□□□□□ -1.15
FGD4-208ENST00000494977 ZKSCAN5Q9Y2L8 839 aa7.86□□□□□ -1.15
FGD4-208ENST00000494977 CLSTN1O94985 981 aa7.86□□□□□ -1.15
FGD4-208ENST00000494977 HSPA5P11021 654 aaKnown RBP7.86□□□□□ -1.15
FGD4-208ENST00000494977 EIF4G2P78344 907 aaKnown RBP eCLIP7.86□□□□□ -1.15
FGD4-208ENST00000494977 PDCL2Q8N4E4 241 aa7.86□□□□□ -1.15
FGD4-208ENST00000494977 CTR9Q6PD62 1173 aa7.85□□□□□ -1.15
FGD4-208ENST00000494977 MAP3K1Q13233 1512 aa7.85□□□□□ -1.15
FGD4-208ENST00000494977 SKAP1Q86WV1 359 aa7.85□□□□□ -1.15
FGD4-208ENST00000494977 GAS2L3Q86XJ1 694 aa7.85□□□□□ -1.15
FGD4-208ENST00000494977 BANK1Q8NDB2 785 aa7.85□□□□□ -1.15
FGD4-208ENST00000494977 OGFRQ9NZT2 677 aa7.85□□□□□ -1.15
FGD4-208ENST00000494977 MFAP1P55081 439 aaKnown RBP7.84□□□□□ -1.15
FGD4-208ENST00000494977 TMED8Q6PL24 325 aaPredicted RBP7.84□□□□□ -1.15
FGD4-208ENST00000494977 MYCBPQ99417 103 aaPredicted RBP7.84□□□□□ -1.15
FGD4-208ENST00000494977 USP19O94966 1318 aa7.84□□□□□ -1.15
FGD4-208ENST00000494977 IBTKQ9P2D0 1353 aaPredicted RBP7.84□□□□□ -1.15
FGD4-208ENST00000494977 SCAPERQ9BY12 1400 aa7.84□□□□□ -1.15
FGD4-208ENST00000494977 SPDYE4A6NLX3 237 aa7.84□□□□□ -1.15
FGD4-208ENST00000494977 ZNF710Q8N1W2 664 aa7.84□□□□□ -1.15
FGD4-208ENST00000494977 GBP4Q96PP9 640 aa7.84□□□□□ -1.15
FGD4-208ENST00000494977 CRBNQ96SW2 442 aa7.84□□□□□ -1.15
FGD4-208ENST00000494977 CCDC39Q9UFE4 941 aa7.84□□□□□ -1.15
FGD4-208ENST00000494977 CCDC7Q96M83 1385 aa7.84□□□□□ -1.16
FGD4-208ENST00000494977 RUSC2Q8N2Y8 1516 aa7.84□□□□□ -1.16
FGD4-208ENST00000494977 HMGB1P09429 215 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms