RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 KCNK17Q96T54 332 aa12.92□□□□□ -0.34
NCL-210ENST00000494618 AXIN2Q9Y2T1 843 aa12.92□□□□□ -0.34
NCL-210ENST00000494618 C6orf132Q5T0Z8 1188 aa12.9□□□□□ -0.34
NCL-210ENST00000494618 POTEEQ6S8J3 1075 aa12.9□□□□□ -0.34
NCL-210ENST00000494618 PSEN2P49810 448 aa12.89□□□□□ -0.35
NCL-210ENST00000494618 KRTAP3-3Q9BYR6 98 aa12.88□□□□□ -0.35
NCL-210ENST00000494618 KRTAP3-2Q9BYR7 98 aa12.88□□□□□ -0.35
NCL-210ENST00000494618 LSM11P83369 360 aaKnown RBP eCLIP12.86□□□□□ -0.35
NCL-210ENST00000494618 PPP1R3GB7ZBB8 358 aa12.85□□□□□ -0.35
NCL-210ENST00000494618 ANKRD13DQ6ZTN6 518 aa12.85□□□□□ -0.35
NCL-210ENST00000494618 TSR1Q2NL82 804 aaKnown RBP12.84□□□□□ -0.35
NCL-210ENST00000494618 PRIM1P49642 420 aaKnown RBP12.83□□□□□ -0.36
NCL-210ENST00000494618 CERKQ8TCT0 537 aa12.83□□□□□ -0.36
NCL-210ENST00000494618 DMRTA1Q5VZB9 504 aa12.82□□□□□ -0.36
NCL-210ENST00000494618 BCANQ96GW7 911 aa12.81□□□□□ -0.36
NCL-210ENST00000494618 NUTM2FA1L443 756 aa12.8□□□□□ -0.36
NCL-210ENST00000494618 TK2O00142 265 aa12.8□□□□□ -0.36
NCL-210ENST00000494618 COL9A1P20849 921 aa12.8□□□□□ -0.36
NCL-210ENST00000494618 SLC4A5Q9BY07 1137 aa12.8□□□□□ -0.36
NCL-210ENST00000494618 RBM26Q5T8P6 1007 aaKnown RBP12.78□□□□□ -0.36
NCL-210ENST00000494618 ZBED2Q9BTP6 218 aa12.78□□□□□ -0.36
NCL-210ENST00000494618 ADGRD1Q6QNK2 874 aa12.77□□□□□ -0.37
NCL-210ENST00000494618 CDHR5Q9HBB8 845 aa12.76□□□□□ -0.37
NCL-210ENST00000494618 STAC3Q96MF2 364 aa12.75□□□□□ -0.37
NCL-210ENST00000494618 VPS9D1Q9Y2B5 631 aa12.75□□□□□ -0.37
NCL-210ENST00000494618 ONECUT3O60422 494 aaPredicted RBP12.74□□□□□ -0.37
NCL-210ENST00000494618 FCHSD2O94868 740 aa12.72□□□□□ -0.37
NCL-210ENST00000494618 PRSS12P56730 875 aa12.72□□□□□ -0.37
NCL-210ENST00000494618 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.72□□□□□ -0.37
NCL-210ENST00000494618 GPIHBP1Q8IV16 184 aa12.72□□□□□ -0.37
NCL-210ENST00000494618 PTGDRQ13258 359 aa12.71□□□□□ -0.37
NCL-210ENST00000494618 PROX2Q3B8N5 592 aa12.71□□□□□ -0.37
NCL-210ENST00000494618 CDCA7LQ96GN5 454 aa12.71□□□□□ -0.37
NCL-210ENST00000494618 NPDC1Q9NQX5 325 aaPredicted RBP12.71□□□□□ -0.37
NCL-210ENST00000494618 TRIM6-TRIM34B2RNG4 842 aa12.7□□□□□ -0.38
NCL-210ENST00000494618 PACS2Q86VP3 889 aa12.7□□□□□ -0.38
NCL-210ENST00000494618 RBM27Q9P2N5 1060 aaKnown RBP12.7□□□□□ -0.38
NCL-210ENST00000494618 RABGEF1Q9UJ41 708 aa12.7□□□□□ -0.38
NCL-210ENST00000494618 LMOD2Q6P5Q4 547 aa12.69□□□□□ -0.38
NCL-210ENST00000494618 SPNS2Q8IVW8 549 aa12.68□□□□□ -0.38
NCL-210ENST00000494618 NBPF3Q9H094 633 aa12.68□□□□□ -0.38
NCL-210ENST00000494618 HRO43593 1189 aa12.67□□□□□ -0.38
NCL-210ENST00000494618 HIC1Q14526 733 aa12.67□□□□□ -0.38
NCL-210ENST00000494618 KIAA1468Q9P260 1216 aa12.67□□□□□ -0.38
NCL-210ENST00000494618 TSKSQ9UJT2 592 aa12.65□□□□□ -0.38
NCL-210ENST00000494618 BHMG1C9JSJ3 638 aaPredicted RBP12.64□□□□□ -0.39
NCL-210ENST00000494618 PADI6Q6TGC4 694 aa12.64□□□□□ -0.39
NCL-210ENST00000494618 MRPL50Q8N5N7 158 aaKnown RBP12.64□□□□□ -0.39
NCL-210ENST00000494618 GNPATO15228 680 aa12.62□□□□□ -0.39
NCL-210ENST00000494618 MYT1LQ9UL68 1186 aa12.62□□□□□ -0.39
NCL-210ENST00000494618 GOLGA8CPA6NN73 597 aa12.61□□□□□ -0.39
NCL-210ENST00000494618 NBPF26B4DH59 902 aa12.61□□□□□ -0.39
NCL-210ENST00000494618 LAPTM4BQ86VI4 370 aa12.6□□□□□ -0.39
NCL-210ENST00000494618 TTC13Q8NBP0 860 aa12.6□□□□□ -0.39
NCL-210ENST00000494618 FAM198AQ9UFP1 575 aa12.59□□□□□ -0.39
NCL-210ENST00000494618 GPR37O15354 613 aa12.58□□□□□ -0.4
NCL-210ENST00000494618 TATDN2Q93075 761 aa12.58□□□□□ -0.4
NCL-210ENST00000494618 PNMA3Q9UL41 463 aa12.58□□□□□ -0.4
NCL-210ENST00000494618 NUDT18Q6ZVK8 323 aa12.56□□□□□ -0.4
NCL-210ENST00000494618 SEPT9Q9UHD8 586 aaPredicted RBP12.56□□□□□ -0.4
NCL-210ENST00000494618 MMRN1Q13201 1228 aa12.55□□□□□ -0.4
NCL-210ENST00000494618 FAM98CQ17RN3 349 aaKnown RBP12.55□□□□□ -0.4
NCL-210ENST00000494618 RNF166Q96A37 237 aaPredicted RBP12.54□□□□□ -0.4
NCL-210ENST00000494618 RBM46Q8TBY0 533 aaKnown RBP12.53□□□□□ -0.4
NCL-210ENST00000494618 ZC3H15Q8WU90 426 aaKnown RBP12.53□□□□□ -0.4
NCL-210ENST00000494618 PLSCR2Q9NRY7 297 aa12.53□□□□□ -0.4
NCL-210ENST00000494618 SMAPO00193 183 aa12.52□□□□□ -0.41
NCL-210ENST00000494618 OATP04181 439 aa12.52□□□□□ -0.41
NCL-210ENST00000494618 FECHP22830 423 aa12.52□□□□□ -0.41
NCL-210ENST00000494618 HDGFP51858 240 aaKnown RBP12.52□□□□□ -0.41
NCL-210ENST00000494618 WNT2BQ93097 391 aa12.51□□□□□ -0.41
NCL-210ENST00000494618 ZFRQ96KR1 1074 aaKnown RBP12.51□□□□□ -0.41
NCL-210ENST00000494618 ADGRG1Q9Y653 693 aa12.51□□□□□ -0.41
NCL-210ENST00000494618 ANKK1Q8NFD2 765 aa12.5□□□□□ -0.41
NCL-210ENST00000494618 KRI1Q8N9T8 703 aaKnown RBP12.49□□□□□ -0.41
NCL-210ENST00000494618 KCTD12Q96CX2 325 aaKnown RBP12.49□□□□□ -0.41
NCL-210ENST00000494618 MINK1Q8N4C8 1332 aaPredicted RBP12.48□□□□□ -0.41
NCL-210ENST00000494618 C3orf80F5H4A9 247 aa12.48□□□□□ -0.41
NCL-210ENST00000494618 MAP2K5Q13163 448 aa12.48□□□□□ -0.41
NCL-210ENST00000494618 EYA1Q99502 592 aa12.48□□□□□ -0.41
NCL-210ENST00000494618 ZMYND10O75800 440 aa12.47□□□□□ -0.41
NCL-210ENST00000494618 FAM161AQ3B820 660 aa12.47□□□□□ -0.41
NCL-210ENST00000494618 BARGINQ6ZT62 677 aa12.45□□□□□ -0.42
NCL-210ENST00000494618 IRF6O14896 467 aa12.44□□□□□ -0.42
NCL-210ENST00000494618 PXYLP1Q8TE99 480 aa12.44□□□□□ -0.42
NCL-210ENST00000494618 LRCH3Q96II8 777 aa12.44□□□□□ -0.42
NCL-210ENST00000494618 DNAJB2P25686 324 aa12.43□□□□□ -0.42
NCL-210ENST00000494618 SLC4A3P48751 1232 aa12.43□□□□□ -0.42
NCL-210ENST00000494618 METTL3Q86U44 580 aaKnown RBP12.43□□□□□ -0.42
NCL-210ENST00000494618 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.43□□□□□ -0.42
NCL-210ENST00000494618 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.42□□□□□ -0.42
NCL-210ENST00000494618 SOWAHBA6NEL2 793 aa12.42□□□□□ -0.42
NCL-210ENST00000494618 RCCD1A6NED2 376 aa12.41□□□□□ -0.42
NCL-210ENST00000494618 THSD4Q6ZMP0 1018 aa12.41□□□□□ -0.42
NCL-210ENST00000494618 SAMD7Q7Z3H4 446 aa12.41□□□□□ -0.42
NCL-210ENST00000494618 HCSTQ9UBK5 93 aa12.4□□□□□ -0.42
NCL-210ENST00000494618 BCAMP50895 628 aa12.38□□□□□ -0.43
NCL-210ENST00000494618 PTPN5P54829 565 aa12.38□□□□□ -0.43
NCL-210ENST00000494618 CCDC102AQ96A19 550 aa12.38□□□□□ -0.43
NCL-210ENST00000494618 SWT1Q5T5J6 900 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms