RNA–Protein interactions for RNA: ENST00000494539.5

CLHC1-213, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 596 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-213ENST00000494539 KCNK17Q96T54 332 aa8.28□□□□□ -1.08
CLHC1-213ENST00000494539 STAC3Q96MF2 364 aa8.27□□□□□ -1.09
CLHC1-213ENST00000494539 ADAM33Q9BZ11 813 aa8.27□□□□□ -1.09
CLHC1-213ENST00000494539 KDM2AQ9Y2K7 1162 aa8.27□□□□□ -1.09
CLHC1-213ENST00000494539 PSEN2P49810 448 aa8.25□□□□□ -1.09
CLHC1-213ENST00000494539 NBR1Q14596 966 aa8.25□□□□□ -1.09
CLHC1-213ENST00000494539 TK2O00142 265 aa8.24□□□□□ -1.09
CLHC1-213ENST00000494539 GRXCR2A6NFK2 248 aa8.23□□□□□ -1.09
CLHC1-213ENST00000494539 EN1Q05925 392 aaPredicted RBP8.23□□□□□ -1.09
CLHC1-213ENST00000494539 PPP1R3GB7ZBB8 358 aa8.22□□□□□ -1.09
CLHC1-213ENST00000494539 DMRTA1Q5VZB9 504 aa8.22□□□□□ -1.09
CLHC1-213ENST00000494539 KCTD12Q96CX2 325 aaKnown RBP8.22□□□□□ -1.09
CLHC1-213ENST00000494539 SLC4A5Q9BY07 1137 aa8.22□□□□□ -1.09
CLHC1-213ENST00000494539 MAP3K7O43318 606 aa8.21□□□□□ -1.1
CLHC1-213ENST00000494539 RBM33Q96EV2 1170 aaKnown RBP8.21□□□□□ -1.1
CLHC1-213ENST00000494539 C6orf132Q5T0Z8 1188 aa8.2□□□□□ -1.1
CLHC1-213ENST00000494539 HRO43593 1189 aa8.19□□□□□ -1.1
CLHC1-213ENST00000494539 SLC24A1O60721 1099 aa8.19□□□□□ -1.1
CLHC1-213ENST00000494539 ZBED2Q9BTP6 218 aa8.18□□□□□ -1.1
CLHC1-213ENST00000494539 VPS9D1Q9Y2B5 631 aa8.18□□□□□ -1.1
CLHC1-213ENST00000494539 OSBPP22059 807 aa8.17□□□□□ -1.1
CLHC1-213ENST00000494539 CERKQ8TCT0 537 aa8.17□□□□□ -1.1
CLHC1-213ENST00000494539 COL9A1P20849 921 aa8.16□□□□□ -1.1
CLHC1-213ENST00000494539 MLLT3P42568 568 aaPredicted RBP8.16□□□□□ -1.1
CLHC1-213ENST00000494539 SMYD5Q6GMV2 418 aa8.16□□□□□ -1.1
CLHC1-213ENST00000494539 SEMA3EO15041 775 aa8.15□□□□□ -1.1
CLHC1-213ENST00000494539 PTPN5P54829 565 aa8.14□□□□□ -1.11
CLHC1-213ENST00000494539 TSR1Q2NL82 804 aaKnown RBP8.14□□□□□ -1.11
CLHC1-213ENST00000494539 NBPF3Q9H094 633 aa8.14□□□□□ -1.11
CLHC1-213ENST00000494539 TESPA1A2RU30 521 aaPredicted RBP8.13□□□□□ -1.11
CLHC1-213ENST00000494539 ONECUT3O60422 494 aaPredicted RBP8.13□□□□□ -1.11
CLHC1-213ENST00000494539 PRIM1P49642 420 aaKnown RBP8.13□□□□□ -1.11
CLHC1-213ENST00000494539 RABGEF1Q9UJ41 708 aa8.12□□□□□ -1.11
CLHC1-213ENST00000494539 TRIM6-TRIM34B2RNG4 842 aa8.11□□□□□ -1.11
CLHC1-213ENST00000494539 PROX2Q3B8N5 592 aa8.11□□□□□ -1.11
CLHC1-213ENST00000494539 TULP1O00294 542 aaPredicted RBP8.1□□□□□ -1.11
CLHC1-213ENST00000494539 MRPL50Q8N5N7 158 aaKnown RBP8.1□□□□□ -1.11
CLHC1-213ENST00000494539 CDHR5Q9HBB8 845 aa8.1□□□□□ -1.11
CLHC1-213ENST00000494539 RBM27Q9P2N5 1060 aaKnown RBP8.1□□□□□ -1.11
CLHC1-213ENST00000494539 GOLGA8CPA6NN73 597 aa8.09□□□□□ -1.11
CLHC1-213ENST00000494539 BHMG1C9JSJ3 638 aaPredicted RBP8.09□□□□□ -1.11
CLHC1-213ENST00000494539 PACS2Q86VP3 889 aa8.09□□□□□ -1.11
CLHC1-213ENST00000494539 RGS20O76081 388 aa8.08□□□□□ -1.12
CLHC1-213ENST00000494539 PRSS12P56730 875 aa8.08□□□□□ -1.12
CLHC1-213ENST00000494539 LAPTM4BQ86VI4 370 aa8.08□□□□□ -1.12
CLHC1-213ENST00000494539 CDCA7LQ96GN5 454 aa8.08□□□□□ -1.12
CLHC1-213ENST00000494539 NUTM2FA1L443 756 aa8.07□□□□□ -1.12
CLHC1-213ENST00000494539 KIAA1468Q9P260 1216 aa8.07□□□□□ -1.12
CLHC1-213ENST00000494539 NBPF26B4DH59 902 aa8.06□□□□□ -1.12
CLHC1-213ENST00000494539 IRX2Q9BZI1 471 aaPredicted RBP8.06□□□□□ -1.12
CLHC1-213ENST00000494539 NPDC1Q9NQX5 325 aaPredicted RBP8.05□□□□□ -1.12
CLHC1-213ENST00000494539 TSKSQ9UJT2 592 aa8.05□□□□□ -1.12
CLHC1-213ENST00000494539 FCHSD2O94868 740 aa8.04□□□□□ -1.12
CLHC1-213ENST00000494539 PTGDRQ13258 359 aa8.04□□□□□ -1.12
CLHC1-213ENST00000494539 THSD4Q6ZMP0 1018 aa8.04□□□□□ -1.12
CLHC1-213ENST00000494539 FAM98CQ17RN3 349 aaKnown RBP8.03□□□□□ -1.12
CLHC1-213ENST00000494539 IFFO2Q5TF58 517 aa8.03□□□□□ -1.12
CLHC1-213ENST00000494539 ANKK1Q8NFD2 765 aa8.03□□□□□ -1.12
CLHC1-213ENST00000494539 WNT2BQ93097 391 aa8.03□□□□□ -1.12
CLHC1-213ENST00000494539 PADI6Q6TGC4 694 aa8.02□□□□□ -1.13
CLHC1-213ENST00000494539 SEPT9Q9UHD8 586 aaPredicted RBP8.02□□□□□ -1.13
CLHC1-213ENST00000494539 RBM26Q5T8P6 1007 aaKnown RBP8.01□□□□□ -1.13
CLHC1-213ENST00000494539 TTC13Q8NBP0 860 aa8.01□□□□□ -1.13
CLHC1-213ENST00000494539 A0A0G2JS52 829 aa8□□□□□ -1.13
CLHC1-213ENST00000494539 HIC1Q14526 733 aa8□□□□□ -1.13
CLHC1-213ENST00000494539 GPIHBP1Q8IV16 184 aa8□□□□□ -1.13
CLHC1-213ENST00000494539 TATDN2Q93075 761 aa8□□□□□ -1.13
CLHC1-213ENST00000494539 ZFRQ96KR1 1074 aaKnown RBP8□□□□□ -1.13
CLHC1-213ENST00000494539 FAM198AQ9UFP1 575 aa8□□□□□ -1.13
CLHC1-213ENST00000494539 PNMA3Q9UL41 463 aa8□□□□□ -1.13
CLHC1-213ENST00000494539 NUDT18Q6ZVK8 323 aa7.97□□□□□ -1.13
CLHC1-213ENST00000494539 SOWAHBA6NEL2 793 aa7.96□□□□□ -1.14
CLHC1-213ENST00000494539 SMAPO00193 183 aa7.96□□□□□ -1.14
CLHC1-213ENST00000494539 GNPATO15228 680 aa7.96□□□□□ -1.14
CLHC1-213ENST00000494539 HDGFP51858 240 aaKnown RBP7.96□□□□□ -1.14
CLHC1-213ENST00000494539 LRCH3Q96II8 777 aa7.96□□□□□ -1.14
CLHC1-213ENST00000494539 GPR37O15354 613 aa7.95□□□□□ -1.14
CLHC1-213ENST00000494539 RBM46Q8TBY0 533 aaKnown RBP7.95□□□□□ -1.14
CLHC1-213ENST00000494539 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.95□□□□□ -1.14
CLHC1-213ENST00000494539 C3orf80F5H4A9 247 aa7.93□□□□□ -1.14
CLHC1-213ENST00000494539 SLC4A3P48751 1232 aa7.93□□□□□ -1.14
CLHC1-213ENST00000494539 BCAMP50895 628 aa7.93□□□□□ -1.14
CLHC1-213ENST00000494539 ADGRG1Q9Y653 693 aa7.93□□□□□ -1.14
CLHC1-213ENST00000494539 OATP04181 439 aa7.92□□□□□ -1.14
CLHC1-213ENST00000494539 NYAP1Q6ZVC0 841 aa7.92□□□□□ -1.14
CLHC1-213ENST00000494539 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.92□□□□□ -1.14
CLHC1-213ENST00000494539 NECTIN2Q92692 538 aa7.92□□□□□ -1.14
CLHC1-213ENST00000494539 EYA1Q99502 592 aa7.92□□□□□ -1.14
CLHC1-213ENST00000494539 DNAJB2P25686 324 aa7.91□□□□□ -1.14
CLHC1-213ENST00000494539 LMOD2Q6P5Q4 547 aa7.91□□□□□ -1.14
CLHC1-213ENST00000494539 SAMD7Q7Z3H4 446 aa7.91□□□□□ -1.14
CLHC1-213ENST00000494539 TSR3Q9UJK0 312 aaKnown RBP7.91□□□□□ -1.14
CLHC1-213ENST00000494539 HPS5Q9UPZ3 1129 aa7.9□□□□□ -1.14
CLHC1-213ENST00000494539 Q6ZNB5 142 aa7.89□□□□□ -1.15
CLHC1-213ENST00000494539 SLF2Q8IX21 1173 aa7.89□□□□□ -1.15
CLHC1-213ENST00000494539 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.88□□□□□ -1.15
CLHC1-213ENST00000494539 RNF40O75150 1001 aa7.88□□□□□ -1.15
CLHC1-213ENST00000494539 PXYLP1Q8TE99 480 aa7.88□□□□□ -1.15
CLHC1-213ENST00000494539 RCCD1A6NED2 376 aa7.87□□□□□ -1.15
CLHC1-213ENST00000494539 FECHP22830 423 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms