RNA–Protein interactions for RNA: ENST00000494276.1

ZNF561-219, Transcript of zinc finger protein 561, humanhuman

TSL 3

Gene ZNF561, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-219ENST00000494276 ZFRQ96KR1 1074 aaKnown RBP10.02□□□□□ -0.81
ZNF561-219ENST00000494276 FBXW7Q969H0 707 aa10□□□□□ -0.81
ZNF561-219ENST00000494276 KIAA1468Q9P260 1216 aa9.99□□□□□ -0.81
ZNF561-219ENST00000494276 CHGAP10645 457 aaKnown RBP9.98□□□□□ -0.81
ZNF561-219ENST00000494276 COL9A1P20849 921 aa9.98□□□□□ -0.81
ZNF561-219ENST00000494276 PCDHGA10Q9Y5H3 936 aa9.98□□□□□ -0.81
ZNF561-219ENST00000494276 ONECUT3O60422 494 aaPredicted RBP9.97□□□□□ -0.81
ZNF561-219ENST00000494276 TYW1BQ6NUM6 668 aa9.97□□□□□ -0.81
ZNF561-219ENST00000494276 TSR3Q9UJK0 312 aaKnown RBP9.96□□□□□ -0.82
ZNF561-219ENST00000494276 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.95□□□□□ -0.82
ZNF561-219ENST00000494276 NCKAP5LQ9HCH0 1330 aa9.95□□□□□ -0.82
ZNF561-219ENST00000494276 NRG2O14511 850 aaPredicted RBP9.94□□□□□ -0.82
ZNF561-219ENST00000494276 DDX27Q96GQ7 796 aaKnown RBP9.94□□□□□ -0.82
ZNF561-219ENST00000494276 LRCH3Q96II8 777 aa9.94□□□□□ -0.82
ZNF561-219ENST00000494276 LARP6Q9BRS8 491 aaKnown RBP9.94□□□□□ -0.82
ZNF561-219ENST00000494276 FAM98CQ17RN3 349 aaKnown RBP9.93□□□□□ -0.82
ZNF561-219ENST00000494276 SEPT9Q9UHD8 586 aaPredicted RBP9.93□□□□□ -0.82
ZNF561-219ENST00000494276 HPS5Q9UPZ3 1129 aa9.93□□□□□ -0.82
ZNF561-219ENST00000494276 PHF14O94880 888 aa9.92□□□□□ -0.82
ZNF561-219ENST00000494276 PRKD2Q9BZL6 878 aa9.91□□□□□ -0.82
ZNF561-219ENST00000494276 ZNF787Q6DD87 383 aa9.9□□□□□ -0.82
ZNF561-219ENST00000494276 DNAJC5Q9H3Z4 198 aa9.9□□□□□ -0.82
ZNF561-219ENST00000494276 TRIM6-TRIM34B2RNG4 842 aa9.88□□□□□ -0.83
ZNF561-219ENST00000494276 NKX1-1Q15270 411 aaPredicted RBP9.88□□□□□ -0.83
ZNF561-219ENST00000494276 PPP4CP60510 307 aa9.87□□□□□ -0.83
ZNF561-219ENST00000494276 C6orf132Q5T0Z8 1188 aa9.87□□□□□ -0.83
ZNF561-219ENST00000494276 EPAS1Q99814 870 aa9.87□□□□□ -0.83
ZNF561-219ENST00000494276 V9GY48 417 aaPredicted RBP9.86□□□□□ -0.83
ZNF561-219ENST00000494276 EMILIN3Q9NT22 766 aa9.84□□□□□ -0.83
ZNF561-219ENST00000494276 MFSD10Q14728 455 aa9.83□□□□□ -0.84
ZNF561-219ENST00000494276 PACS2Q86VP3 889 aa9.82□□□□□ -0.84
ZNF561-219ENST00000494276 TJAP1Q5JTD0 557 aa9.81□□□□□ -0.84
ZNF561-219ENST00000494276 PDZRN3Q9UPQ7 1066 aa9.81□□□□□ -0.84
ZNF561-219ENST00000494276 PPP1R18Q6NYC8 613 aa9.8□□□□□ -0.84
ZNF561-219ENST00000494276 IL21Q9HBE4 155 aa9.8□□□□□ -0.84
ZNF561-219ENST00000494276 ZNF775Q96BV0 537 aaPredicted RBP9.78□□□□□ -0.84
ZNF561-219ENST00000494276 RBM33Q96EV2 1170 aaKnown RBP9.78□□□□□ -0.84
ZNF561-219ENST00000494276 MTRQ99707 1265 aa9.77□□□□□ -0.85
ZNF561-219ENST00000494276 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.77□□□□□ -0.85
ZNF561-219ENST00000494276 GGCXP38435 758 aa9.74□□□□□ -0.85
ZNF561-219ENST00000494276 SAMD7Q7Z3H4 446 aa9.72□□□□□ -0.85
ZNF561-219ENST00000494276 GTPBP6O43824 516 aaPredicted RBP9.71□□□□□ -0.86
ZNF561-219ENST00000494276 TSKSQ9UJT2 592 aa9.71□□□□□ -0.86
ZNF561-219ENST00000494276 HDGFP51858 240 aaKnown RBP9.7□□□□□ -0.86
ZNF561-219ENST00000494276 DDX12PQ92771 950 aa9.7□□□□□ -0.86
ZNF561-219ENST00000494276 MAP3K7O43318 606 aa9.69□□□□□ -0.86
ZNF561-219ENST00000494276 ZNF516Q92618 1163 aa9.69□□□□□ -0.86
ZNF561-219ENST00000494276 DPYSL4O14531 572 aa9.68□□□□□ -0.86
ZNF561-219ENST00000494276 SMAPO00193 183 aa9.66□□□□□ -0.86
ZNF561-219ENST00000494276 EN1Q05925 392 aaPredicted RBP9.66□□□□□ -0.86
ZNF561-219ENST00000494276 RNF40O75150 1001 aa9.65□□□□□ -0.86
ZNF561-219ENST00000494276 NBR1Q14596 966 aa9.65□□□□□ -0.86
ZNF561-219ENST00000494276 NECTIN2Q92692 538 aa9.65□□□□□ -0.86
ZNF561-219ENST00000494276 CDCA7LQ96GN5 454 aa9.65□□□□□ -0.86
ZNF561-219ENST00000494276 TMUB1Q9BVT8 246 aa9.65□□□□□ -0.86
ZNF561-219ENST00000494276 NBPF26B4DH59 902 aa9.64□□□□□ -0.87
ZNF561-219ENST00000494276 CAMK2BQ13554 666 aa9.64□□□□□ -0.87
ZNF561-219ENST00000494276 PKDCCQ504Y2 493 aa9.64□□□□□ -0.87
ZNF561-219ENST00000494276 TSR1Q2NL82 804 aaKnown RBP9.63□□□□□ -0.87
ZNF561-219ENST00000494276 CERKQ8TCT0 537 aa9.63□□□□□ -0.87
ZNF561-219ENST00000494276 PRSS12P56730 875 aa9.62□□□□□ -0.87
ZNF561-219ENST00000494276 NKX2-3Q8TAU0 364 aa9.62□□□□□ -0.87
ZNF561-219ENST00000494276 APLP1P51693 650 aa9.61□□□□□ -0.87
ZNF561-219ENST00000494276 TATDN2Q93075 761 aa9.61□□□□□ -0.87
ZNF561-219ENST00000494276 PNMA3Q9UL41 463 aa9.61□□□□□ -0.87
ZNF561-219ENST00000494276 DGAT1O75907 488 aa9.6□□□□□ -0.87
ZNF561-219ENST00000494276 LCE2AQ5TA79 106 aaPredicted RBP9.59□□□□□ -0.87
ZNF561-219ENST00000494276 COPS2P61201 443 aa9.58□□□□□ -0.88
ZNF561-219ENST00000494276 CADPS2Q86UW7 1296 aa9.58□□□□□ -0.88
ZNF561-219ENST00000494276 SLC19A1P41440 591 aa9.57□□□□□ -0.88
ZNF561-219ENST00000494276 SLC4A3P48751 1232 aa9.57□□□□□ -0.88
ZNF561-219ENST00000494276 MYT1Q01538 1121 aa9.57□□□□□ -0.88
ZNF561-219ENST00000494276 FAM198AQ9UFP1 575 aa9.55□□□□□ -0.88
ZNF561-219ENST00000494276 ZPR1O75312 459 aa9.54□□□□□ -0.88
ZNF561-219ENST00000494276 TRIM67Q6ZTA4 783 aa9.54□□□□□ -0.88
ZNF561-219ENST00000494276 SLF2Q8IX21 1173 aa9.54□□□□□ -0.88
ZNF561-219ENST00000494276 SPDYE16A6NNV3 312 aaPredicted RBP9.53□□□□□ -0.88
ZNF561-219ENST00000494276 POTECB2RU33 542 aa9.53□□□□□ -0.88
ZNF561-219ENST00000494276 NUDT18Q6ZVK8 323 aa9.53□□□□□ -0.88
ZNF561-219ENST00000494276 PRR20EP86478 221 aa9.52□□□□□ -0.89
ZNF561-219ENST00000494276 PRR20CP86479 221 aa9.52□□□□□ -0.89
ZNF561-219ENST00000494276 PRR20DP86480 221 aa9.52□□□□□ -0.89
ZNF561-219ENST00000494276 PRR20BP86481 221 aa9.52□□□□□ -0.89
ZNF561-219ENST00000494276 PRR20AP86496 221 aa9.52□□□□□ -0.89
ZNF561-219ENST00000494276 PDIA6Q15084 440 aa9.52□□□□□ -0.89
ZNF561-219ENST00000494276 TREML4Q6UXN2 200 aa9.52□□□□□ -0.89
ZNF561-219ENST00000494276 PRR14Q9BWN1 585 aa9.52□□□□□ -0.89
ZNF561-219ENST00000494276 C3orf80F5H4A9 247 aa9.51□□□□□ -0.89
ZNF561-219ENST00000494276 ZNF598Q86UK7 904 aaKnown RBP9.51□□□□□ -0.89
ZNF561-219ENST00000494276 FAM187AA6NFU0 413 aa9.5□□□□□ -0.89
ZNF561-219ENST00000494276 RNF223E7ERA6 249 aa9.5□□□□□ -0.89
ZNF561-219ENST00000494276 SPRYD7Q5W111 196 aa9.5□□□□□ -0.89
ZNF561-219ENST00000494276 RBM27Q9P2N5 1060 aaKnown RBP9.49□□□□□ -0.89
ZNF561-219ENST00000494276 PCDHB3Q9Y5E6 796 aa9.48□□□□□ -0.89
ZNF561-219ENST00000494276 SWT1Q5T5J6 900 aaKnown RBP9.47□□□□□ -0.89
ZNF561-219ENST00000494276 ANKLE1Q8NAG6 615 aa9.46□□□□□ -0.9
ZNF561-219ENST00000494276 GRXCR2A6NFK2 248 aa9.45□□□□□ -0.9
ZNF561-219ENST00000494276 ZNF697Q5TEC3 545 aa9.45□□□□□ -0.9
ZNF561-219ENST00000494276 DCAF8L2P0C7V8 631 aa9.44□□□□□ -0.9
ZNF561-219ENST00000494276 EMID1Q96A84 441 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms