RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 VPS9D1Q9Y2B5 631 aa5.47□□□□□ -1.53
CDC42EP3-205ENST00000494083 KDM2AQ9Y2K7 1162 aa5.47□□□□□ -1.53
CDC42EP3-205ENST00000494083 HAP1P54257 671 aaPredicted RBP5.47□□□□□ -1.53
CDC42EP3-205ENST00000494083 MLLT3P42568 568 aaPredicted RBP5.47□□□□□ -1.53
CDC42EP3-205ENST00000494083 PHF14O94880 888 aa5.46□□□□□ -1.53
CDC42EP3-205ENST00000494083 CDHR5Q9HBB8 845 aa5.46□□□□□ -1.54
CDC42EP3-205ENST00000494083 MAP3K7O43318 606 aa5.45□□□□□ -1.54
CDC42EP3-205ENST00000494083 C6orf132Q5T0Z8 1188 aa5.45□□□□□ -1.54
CDC42EP3-205ENST00000494083 TYW1BQ6NUM6 668 aa5.45□□□□□ -1.54
CDC42EP3-205ENST00000494083 EN1Q05925 392 aaPredicted RBP5.44□□□□□ -1.54
CDC42EP3-205ENST00000494083 C3orf80F5H4A9 247 aa5.44□□□□□ -1.54
CDC42EP3-205ENST00000494083 PTGER2P43116 358 aa5.44□□□□□ -1.54
CDC42EP3-205ENST00000494083 KCTD12Q96CX2 325 aaKnown RBP5.44□□□□□ -1.54
CDC42EP3-205ENST00000494083 SEPT9Q9UHD8 586 aaPredicted RBP5.44□□□□□ -1.54
CDC42EP3-205ENST00000494083 SEMA3EO15041 775 aa5.43□□□□□ -1.54
CDC42EP3-205ENST00000494083 KCNH8Q96L42 1107 aa5.43□□□□□ -1.54
CDC42EP3-205ENST00000494083 ARIH1Q9Y4X5 557 aaPredicted RBP5.43□□□□□ -1.54
CDC42EP3-205ENST00000494083 PPP1R3GB7ZBB8 358 aa5.43□□□□□ -1.54
CDC42EP3-205ENST00000494083 TK2O00142 265 aa5.43□□□□□ -1.54
CDC42EP3-205ENST00000494083 OSBPP22059 807 aa5.43□□□□□ -1.54
CDC42EP3-205ENST00000494083 FBXW7Q969H0 707 aa5.43□□□□□ -1.54
CDC42EP3-205ENST00000494083 BHMG1C9JSJ3 638 aaPredicted RBP5.42□□□□□ -1.54
CDC42EP3-205ENST00000494083 FAM198AQ9UFP1 575 aa5.41□□□□□ -1.54
CDC42EP3-205ENST00000494083 TSKSQ9UJT2 592 aa5.41□□□□□ -1.54
CDC42EP3-205ENST00000494083 SMAPO00193 183 aa5.41□□□□□ -1.54
CDC42EP3-205ENST00000494083 SPDYE16A6NNV3 312 aaPredicted RBP5.4□□□□□ -1.54
CDC42EP3-205ENST00000494083 EPAS1Q99814 870 aa5.4□□□□□ -1.54
CDC42EP3-205ENST00000494083 ARHGEF1Q92888 912 aaKnown RBP5.4□□□□□ -1.55
CDC42EP3-205ENST00000494083 KIAA1468Q9P260 1216 aa5.39□□□□□ -1.55
CDC42EP3-205ENST00000494083 PTPN5P54829 565 aa5.39□□□□□ -1.55
CDC42EP3-205ENST00000494083 MRPL50Q8N5N7 158 aaKnown RBP5.38□□□□□ -1.55
CDC42EP3-205ENST00000494083 NPDC1Q9NQX5 325 aaPredicted RBP5.38□□□□□ -1.55
CDC42EP3-205ENST00000494083 SLC4A5Q9BY07 1137 aa5.38□□□□□ -1.55
CDC42EP3-205ENST00000494083 RABGEF1Q9UJ41 708 aa5.38□□□□□ -1.55
CDC42EP3-205ENST00000494083 BCAMP50895 628 aa5.37□□□□□ -1.55
CDC42EP3-205ENST00000494083 TRIM6-TRIM34B2RNG4 842 aa5.37□□□□□ -1.55
CDC42EP3-205ENST00000494083 CDCA7LQ96GN5 454 aa5.37□□□□□ -1.55
CDC42EP3-205ENST00000494083 FAM161AQ3B820 660 aa5.36□□□□□ -1.55
CDC42EP3-205ENST00000494083 THSD4Q6ZMP0 1018 aa5.36□□□□□ -1.55
CDC42EP3-205ENST00000494083 P3H3Q8IVL6 736 aa5.36□□□□□ -1.55
CDC42EP3-205ENST00000494083 WNT2BQ93097 391 aa5.36□□□□□ -1.55
CDC42EP3-205ENST00000494083 NBPF3Q9H094 633 aa5.36□□□□□ -1.55
CDC42EP3-205ENST00000494083 ZFRQ96KR1 1074 aaKnown RBP5.35□□□□□ -1.55
CDC42EP3-205ENST00000494083 RBM26Q5T8P6 1007 aaKnown RBP5.35□□□□□ -1.55
CDC42EP3-205ENST00000494083 PADI6Q6TGC4 694 aa5.34□□□□□ -1.55
CDC42EP3-205ENST00000494083 STAC3Q96MF2 364 aa5.34□□□□□ -1.55
CDC42EP3-205ENST00000494083 PRSS12P56730 875 aa5.34□□□□□ -1.56
CDC42EP3-205ENST00000494083 GOLGA8CPA6NN73 597 aa5.32□□□□□ -1.56
CDC42EP3-205ENST00000494083 WBP1LQ9NX94 342 aa5.32□□□□□ -1.56
CDC42EP3-205ENST00000494083 HCSTQ9UBK5 93 aa5.32□□□□□ -1.56
CDC42EP3-205ENST00000494083 PTGDRQ13258 359 aa5.32□□□□□ -1.56
CDC42EP3-205ENST00000494083 NUTM2FA1L443 756 aa5.32□□□□□ -1.56
CDC42EP3-205ENST00000494083 NUDT18Q6ZVK8 323 aa5.32□□□□□ -1.56
CDC42EP3-205ENST00000494083 TESPA1A2RU30 521 aaPredicted RBP5.31□□□□□ -1.56
CDC42EP3-205ENST00000494083 ONECUT3O60422 494 aaPredicted RBP5.31□□□□□ -1.56
CDC42EP3-205ENST00000494083 FECHP22830 423 aa5.31□□□□□ -1.56
CDC42EP3-205ENST00000494083 FAM98CQ17RN3 349 aaKnown RBP5.31□□□□□ -1.56
CDC42EP3-205ENST00000494083 PNMA3Q9UL41 463 aa5.31□□□□□ -1.56
CDC42EP3-205ENST00000494083 SAMD7Q7Z3H4 446 aa5.31□□□□□ -1.56
CDC42EP3-205ENST00000494083 ANKK1Q8NFD2 765 aa5.3□□□□□ -1.56
CDC42EP3-205ENST00000494083 TATDN2Q93075 761 aa5.3□□□□□ -1.56
CDC42EP3-205ENST00000494083 SOWAHBA6NEL2 793 aa5.3□□□□□ -1.56
CDC42EP3-205ENST00000494083 RNF40O75150 1001 aa5.29□□□□□ -1.56
CDC42EP3-205ENST00000494083 NLRP7Q8WX94 980 aa5.29□□□□□ -1.56
CDC42EP3-205ENST00000494083 PLA2G2EQ9NZK7 142 aa5.29□□□□□ -1.56
CDC42EP3-205ENST00000494083 GPR37O15354 613 aa5.29□□□□□ -1.56
CDC42EP3-205ENST00000494083 PACS2Q86VP3 889 aa5.29□□□□□ -1.56
CDC42EP3-205ENST00000494083 TTC13Q8NBP0 860 aa5.28□□□□□ -1.56
CDC42EP3-205ENST00000494083 VSIG10Q8N0Z9 540 aa5.27□□□□□ -1.57
CDC42EP3-205ENST00000494083 HPS5Q9UPZ3 1129 aa5.27□□□□□ -1.57
CDC42EP3-205ENST00000494083 LAPTM4BQ86VI4 370 aa5.27□□□□□ -1.57
CDC42EP3-205ENST00000494083 CERKQ8TCT0 537 aa5.27□□□□□ -1.57
CDC42EP3-205ENST00000494083 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.27□□□□□ -1.57
CDC42EP3-205ENST00000494083 NBPF26B4DH59 902 aa5.27□□□□□ -1.57
CDC42EP3-205ENST00000494083 LRCH3Q96II8 777 aa5.26□□□□□ -1.57
CDC42EP3-205ENST00000494083 RBM27Q9P2N5 1060 aaKnown RBP5.26□□□□□ -1.57
CDC42EP3-205ENST00000494083 EYA1Q99502 592 aa5.25□□□□□ -1.57
CDC42EP3-205ENST00000494083 SWT1Q5T5J6 900 aaKnown RBP5.25□□□□□ -1.57
CDC42EP3-205ENST00000494083 ADGRG1Q9Y653 693 aa5.25□□□□□ -1.57
CDC42EP3-205ENST00000494083 PHOX2BQ99453 314 aa5.24□□□□□ -1.57
CDC42EP3-205ENST00000494083 FCHSD2O94868 740 aa5.23□□□□□ -1.57
CDC42EP3-205ENST00000494083 APLP1P51693 650 aa5.23□□□□□ -1.57
CDC42EP3-205ENST00000494083 TSR3Q9UJK0 312 aaKnown RBP5.23□□□□□ -1.57
CDC42EP3-205ENST00000494083 RCCD1A6NED2 376 aa5.22□□□□□ -1.57
CDC42EP3-205ENST00000494083 HIC1Q14526 733 aa5.21□□□□□ -1.57
CDC42EP3-205ENST00000494083 METTL3Q86U44 580 aaKnown RBP5.21□□□□□ -1.57
CDC42EP3-205ENST00000494083 GPIHBP1Q8IV16 184 aa5.21□□□□□ -1.57
CDC42EP3-205ENST00000494083 CCDC180Q9P1Z9 1646 aa5.21□□□□□ -1.58
CDC42EP3-205ENST00000494083 GNPATO15228 680 aa5.21□□□□□ -1.58
CDC42EP3-205ENST00000494083 PPP4CP60510 307 aa5.21□□□□□ -1.58
CDC42EP3-205ENST00000494083 PXYLP1Q8TE99 480 aa5.2□□□□□ -1.58
CDC42EP3-205ENST00000494083 ZNF516Q92618 1163 aa5.2□□□□□ -1.58
CDC42EP3-205ENST00000494083 TMEM134Q9H6X4 195 aa5.2□□□□□ -1.58
CDC42EP3-205ENST00000494083 SLC10A3P09131 477 aa5.19□□□□□ -1.58
CDC42EP3-205ENST00000494083 COPS2P61201 443 aa5.19□□□□□ -1.58
CDC42EP3-205ENST00000494083 ITGBL1O95965 494 aaPredicted RBP5.19□□□□□ -1.58
CDC42EP3-205ENST00000494083 MTRQ99707 1265 aa5.19□□□□□ -1.58
CDC42EP3-205ENST00000494083 DNAJB2P25686 324 aa5.18□□□□□ -1.58
CDC42EP3-205ENST00000494083 TJAP1Q5JTD0 557 aa5.18□□□□□ -1.58
CDC42EP3-205ENST00000494083 NKX2-3Q8TAU0 364 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms