RNA–Protein interactions for RNA: ENST00000494044.1

LPP-218, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 5

Gene LPP, Length 300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-218ENST00000494044 DDX12PQ92771 950 aa9.95□□□□□ -0.82
LPP-218ENST00000494044 PDIA6Q15084 440 aa9.94□□□□□ -0.82
LPP-218ENST00000494044 ARIH1Q9Y4X5 557 aaPredicted RBP9.94□□□□□ -0.82
LPP-218ENST00000494044 BHMG1C9JSJ3 638 aaPredicted RBP9.92□□□□□ -0.82
LPP-218ENST00000494044 C6orf132Q5T0Z8 1188 aa9.92□□□□□ -0.82
LPP-218ENST00000494044 PPP1R3GB7ZBB8 358 aa9.91□□□□□ -0.82
LPP-218ENST00000494044 COL9A1P20849 921 aa9.91□□□□□ -0.82
LPP-218ENST00000494044 RBM33Q96EV2 1170 aaKnown RBP9.91□□□□□ -0.82
LPP-218ENST00000494044 HCSTQ9UBK5 93 aa9.91□□□□□ -0.82
LPP-218ENST00000494044 KCTD12Q96CX2 325 aaKnown RBP9.89□□□□□ -0.83
LPP-218ENST00000494044 MRPL50Q8N5N7 158 aaKnown RBP9.88□□□□□ -0.83
LPP-218ENST00000494044 GOLGA8CPA6NN73 597 aa9.87□□□□□ -0.83
LPP-218ENST00000494044 NBR1Q14596 966 aa9.87□□□□□ -0.83
LPP-218ENST00000494044 GRXCR2A6NFK2 248 aa9.86□□□□□ -0.83
LPP-218ENST00000494044 PLCB2Q00722 1185 aa9.86□□□□□ -0.83
LPP-218ENST00000494044 PROX2Q3B8N5 592 aa9.86□□□□□ -0.83
LPP-218ENST00000494044 NBPF3Q9H094 633 aa9.86□□□□□ -0.83
LPP-218ENST00000494044 RABGEF1Q9UJ41 708 aa9.86□□□□□ -0.83
LPP-218ENST00000494044 MAP3K7O43318 606 aa9.85□□□□□ -0.83
LPP-218ENST00000494044 EN1Q05925 392 aaPredicted RBP9.85□□□□□ -0.83
LPP-218ENST00000494044 ONECUT3O60422 494 aaPredicted RBP9.84□□□□□ -0.83
LPP-218ENST00000494044 ARHGEF1Q92888 912 aaKnown RBP9.84□□□□□ -0.83
LPP-218ENST00000494044 KIAA1468Q9P260 1216 aa9.83□□□□□ -0.84
LPP-218ENST00000494044 PTPN5P54829 565 aa9.81□□□□□ -0.84
LPP-218ENST00000494044 TSR1Q2NL82 804 aaKnown RBP9.81□□□□□ -0.84
LPP-218ENST00000494044 WNT2BQ93097 391 aa9.81□□□□□ -0.84
LPP-218ENST00000494044 OSBPP22059 807 aa9.8□□□□□ -0.84
LPP-218ENST00000494044 TRIM6-TRIM34B2RNG4 842 aa9.79□□□□□ -0.84
LPP-218ENST00000494044 PRIM1P49642 420 aaKnown RBP9.78□□□□□ -0.84
LPP-218ENST00000494044 THSD4Q6ZMP0 1018 aa9.78□□□□□ -0.84
LPP-218ENST00000494044 LAPTM4BQ86VI4 370 aa9.78□□□□□ -0.84
LPP-218ENST00000494044 KCNV2Q8TDN2 545 aa9.78□□□□□ -0.84
LPP-218ENST00000494044 CERKQ8TCT0 537 aa9.77□□□□□ -0.85
LPP-218ENST00000494044 PACS2Q86VP3 889 aa9.76□□□□□ -0.85
LPP-218ENST00000494044 PLA2G2EQ9NZK7 142 aa9.76□□□□□ -0.85
LPP-218ENST00000494044 ANKK1Q8NFD2 765 aa9.75□□□□□ -0.85
LPP-218ENST00000494044 PRSS12P56730 875 aa9.74□□□□□ -0.85
LPP-218ENST00000494044 P3H3Q8IVL6 736 aa9.74□□□□□ -0.85
LPP-218ENST00000494044 CDCA7LQ96GN5 454 aa9.74□□□□□ -0.85
LPP-218ENST00000494044 ZFRQ96KR1 1074 aaKnown RBP9.74□□□□□ -0.85
LPP-218ENST00000494044 TSKSQ9UJT2 592 aa9.74□□□□□ -0.85
LPP-218ENST00000494044 SEPT9Q9UHD8 586 aaPredicted RBP9.73□□□□□ -0.85
LPP-218ENST00000494044 FAM98CQ17RN3 349 aaKnown RBP9.72□□□□□ -0.85
LPP-218ENST00000494044 MLLT3P42568 568 aaPredicted RBP9.71□□□□□ -0.86
LPP-218ENST00000494044 HAP1P54257 671 aaPredicted RBP9.71□□□□□ -0.86
LPP-218ENST00000494044 SOWAHBA6NEL2 793 aa9.7□□□□□ -0.86
LPP-218ENST00000494044 CDHR5Q9HBB8 845 aa9.7□□□□□ -0.86
LPP-218ENST00000494044 BCAMP50895 628 aa9.68□□□□□ -0.86
LPP-218ENST00000494044 NPDC1Q9NQX5 325 aaPredicted RBP9.68□□□□□ -0.86
LPP-218ENST00000494044 FAM198AQ9UFP1 575 aa9.68□□□□□ -0.86
LPP-218ENST00000494044 TATDN2Q93075 761 aa9.66□□□□□ -0.86
LPP-218ENST00000494044 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.66□□□□□ -0.86
LPP-218ENST00000494044 SMAPO00193 183 aa9.65□□□□□ -0.86
LPP-218ENST00000494044 LRCH3Q96II8 777 aa9.65□□□□□ -0.86
LPP-218ENST00000494044 RBM27Q9P2N5 1060 aaKnown RBP9.65□□□□□ -0.86
LPP-218ENST00000494044 PNMA3Q9UL41 463 aa9.65□□□□□ -0.86
LPP-218ENST00000494044 NBPF26B4DH59 902 aa9.64□□□□□ -0.87
LPP-218ENST00000494044 SEMA3EO15041 775 aa9.64□□□□□ -0.87
LPP-218ENST00000494044 WBP1LQ9NX94 342 aa9.63□□□□□ -0.87
LPP-218ENST00000494044 C3orf80F5H4A9 247 aa9.62□□□□□ -0.87
LPP-218ENST00000494044 NYAP1Q6ZVC0 841 aa9.62□□□□□ -0.87
LPP-218ENST00000494044 NUDT18Q6ZVK8 323 aa9.62□□□□□ -0.87
LPP-218ENST00000494044 TTC13Q8NBP0 860 aa9.62□□□□□ -0.87
LPP-218ENST00000494044 TSR3Q9UJK0 312 aaKnown RBP9.62□□□□□ -0.87
LPP-218ENST00000494044 HDGFP51858 240 aaKnown RBP9.61□□□□□ -0.87
LPP-218ENST00000494044 PADI6Q6TGC4 694 aa9.61□□□□□ -0.87
LPP-218ENST00000494044 HPS5Q9UPZ3 1129 aa9.61□□□□□ -0.87
LPP-218ENST00000494044 NUTM2FA1L443 756 aa9.6□□□□□ -0.87
LPP-218ENST00000494044 IFFO2Q5TF58 517 aa9.6□□□□□ -0.87
LPP-218ENST00000494044 SAMD7Q7Z3H4 446 aa9.6□□□□□ -0.87
LPP-218ENST00000494044 KDM2AQ9Y2K7 1162 aa9.6□□□□□ -0.87
LPP-218ENST00000494044 PPP4CP60510 307 aa9.59□□□□□ -0.87
LPP-218ENST00000494044 PTGDRQ13258 359 aa9.58□□□□□ -0.88
LPP-218ENST00000494044 SMYD5Q6GMV2 418 aa9.57□□□□□ -0.88
LPP-218ENST00000494044 VSIG10Q8N0Z9 540 aa9.57□□□□□ -0.88
LPP-218ENST00000494044 TESPA1A2RU30 521 aaPredicted RBP9.56□□□□□ -0.88
LPP-218ENST00000494044 ITGBL1O95965 494 aaPredicted RBP9.54□□□□□ -0.88
LPP-218ENST00000494044 EYA1Q99502 592 aa9.54□□□□□ -0.88
LPP-218ENST00000494044 FCHSD2O94868 740 aa9.53□□□□□ -0.88
LPP-218ENST00000494044 BCANQ96GW7 911 aa9.52□□□□□ -0.89
LPP-218ENST00000494044 KCNC4Q03721 635 aa9.51□□□□□ -0.89
LPP-218ENST00000494044 RNF40O75150 1001 aa9.5□□□□□ -0.89
LPP-218ENST00000494044 SWT1Q5T5J6 900 aaKnown RBP9.5□□□□□ -0.89
LPP-218ENST00000494044 RBM26Q5T8P6 1007 aaKnown RBP9.5□□□□□ -0.89
LPP-218ENST00000494044 RBM46Q8TBY0 533 aaKnown RBP9.5□□□□□ -0.89
LPP-218ENST00000494044 A0A0G2JS52 829 aa9.49□□□□□ -0.89
LPP-218ENST00000494044 SLC4A3P48751 1232 aa9.49□□□□□ -0.89
LPP-218ENST00000494044 SLF2Q8IX21 1173 aa9.49□□□□□ -0.89
LPP-218ENST00000494044 ADGRG1Q9Y653 693 aa9.49□□□□□ -0.89
LPP-218ENST00000494044 NECTIN2Q92692 538 aa9.48□□□□□ -0.89
LPP-218ENST00000494044 RGS20O76081 388 aa9.47□□□□□ -0.89
LPP-218ENST00000494044 FAM161AQ3B820 660 aa9.47□□□□□ -0.89
LPP-218ENST00000494044 DNAJB2P25686 324 aa9.45□□□□□ -0.9
LPP-218ENST00000494044 HIC1Q14526 733 aa9.45□□□□□ -0.9
LPP-218ENST00000494044 TJAP1Q5JTD0 557 aa9.45□□□□□ -0.9
LPP-218ENST00000494044 RCCD1A6NED2 376 aa9.44□□□□□ -0.9
LPP-218ENST00000494044 OATP04181 439 aa9.44□□□□□ -0.9
LPP-218ENST00000494044 APLP1P51693 650 aa9.44□□□□□ -0.9
LPP-218ENST00000494044 MTRQ99707 1265 aa9.42□□□□□ -0.9
LPP-218ENST00000494044 IRX2Q9BZI1 471 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms