RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 PPP1R3GB7ZBB8 358 aa10.76□□□□□ -0.69
ITGB1-216ENST00000493758 KCNH8Q96L42 1107 aa10.76□□□□□ -0.69
ITGB1-216ENST00000493758 BCANQ96GW7 911 aa10.75□□□□□ -0.69
ITGB1-216ENST00000493758 SLC4A5Q9BY07 1137 aa10.75□□□□□ -0.69
ITGB1-216ENST00000493758 TULP1O00294 542 aaPredicted RBP10.74□□□□□ -0.69
ITGB1-216ENST00000493758 MAP3K7O43318 606 aa10.74□□□□□ -0.69
ITGB1-216ENST00000493758 C6orf132Q5T0Z8 1188 aa10.74□□□□□ -0.69
ITGB1-216ENST00000493758 CERKQ8TCT0 537 aa10.73□□□□□ -0.69
ITGB1-216ENST00000493758 LSM11P83369 360 aaKnown RBP eCLIP10.72□□□□□ -0.69
ITGB1-216ENST00000493758 KCNK17Q96T54 332 aa10.72□□□□□ -0.69
ITGB1-216ENST00000493758 RBM27Q9P2N5 1060 aaKnown RBP10.72□□□□□ -0.69
ITGB1-216ENST00000493758 TK2O00142 265 aa10.71□□□□□ -0.69
ITGB1-216ENST00000493758 TSR1Q2NL82 804 aaKnown RBP10.71□□□□□ -0.69
ITGB1-216ENST00000493758 RBM33Q96EV2 1170 aaKnown RBP10.69□□□□□ -0.7
ITGB1-216ENST00000493758 PSEN2P49810 448 aa10.68□□□□□ -0.7
ITGB1-216ENST00000493758 ZBED2Q9BTP6 218 aa10.68□□□□□ -0.7
ITGB1-216ENST00000493758 GPR37O15354 613 aa10.67□□□□□ -0.7
ITGB1-216ENST00000493758 ONECUT3O60422 494 aaPredicted RBP10.67□□□□□ -0.7
ITGB1-216ENST00000493758 COL9A1P20849 921 aa10.67□□□□□ -0.7
ITGB1-216ENST00000493758 PTGDRQ13258 359 aa10.67□□□□□ -0.7
ITGB1-216ENST00000493758 DMRTA1Q5VZB9 504 aa10.67□□□□□ -0.7
ITGB1-216ENST00000493758 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.67□□□□□ -0.7
ITGB1-216ENST00000493758 CDHR5Q9HBB8 845 aa10.67□□□□□ -0.7
ITGB1-216ENST00000493758 AXIN2Q9Y2T1 843 aa10.67□□□□□ -0.7
ITGB1-216ENST00000493758 RBM26Q5T8P6 1007 aaKnown RBP10.66□□□□□ -0.7
ITGB1-216ENST00000493758 NPDC1Q9NQX5 325 aaPredicted RBP10.66□□□□□ -0.7
ITGB1-216ENST00000493758 TTC13Q8NBP0 860 aa10.64□□□□□ -0.71
ITGB1-216ENST00000493758 FCHSD2O94868 740 aa10.63□□□□□ -0.71
ITGB1-216ENST00000493758 LMOD2Q6P5Q4 547 aa10.63□□□□□ -0.71
ITGB1-216ENST00000493758 ADGRD1Q6QNK2 874 aa10.63□□□□□ -0.71
ITGB1-216ENST00000493758 VPS9D1Q9Y2B5 631 aa10.63□□□□□ -0.71
ITGB1-216ENST00000493758 GPIHBP1Q8IV16 184 aa10.62□□□□□ -0.71
ITGB1-216ENST00000493758 TRIM6-TRIM34B2RNG4 842 aa10.61□□□□□ -0.71
ITGB1-216ENST00000493758 HRO43593 1189 aa10.61□□□□□ -0.71
ITGB1-216ENST00000493758 PRSS12P56730 875 aa10.61□□□□□ -0.71
ITGB1-216ENST00000493758 HIC1Q14526 733 aa10.61□□□□□ -0.71
ITGB1-216ENST00000493758 NUTM2FA1L443 756 aa10.6□□□□□ -0.71
ITGB1-216ENST00000493758 RABGEF1Q9UJ41 708 aa10.6□□□□□ -0.71
ITGB1-216ENST00000493758 CDCA7LQ96GN5 454 aa10.59□□□□□ -0.71
ITGB1-216ENST00000493758 BHMG1C9JSJ3 638 aaPredicted RBP10.58□□□□□ -0.72
ITGB1-216ENST00000493758 PROX2Q3B8N5 592 aa10.57□□□□□ -0.72
ITGB1-216ENST00000493758 GNPATO15228 680 aa10.56□□□□□ -0.72
ITGB1-216ENST00000493758 NBPF3Q9H094 633 aa10.56□□□□□ -0.72
ITGB1-216ENST00000493758 TSKSQ9UJT2 592 aa10.56□□□□□ -0.72
ITGB1-216ENST00000493758 ANKRD13DQ6ZTN6 518 aa10.55□□□□□ -0.72
ITGB1-216ENST00000493758 PADI6Q6TGC4 694 aa10.54□□□□□ -0.72
ITGB1-216ENST00000493758 LAPTM4BQ86VI4 370 aa10.54□□□□□ -0.72
ITGB1-216ENST00000493758 FAM198AQ9UFP1 575 aa10.54□□□□□ -0.72
ITGB1-216ENST00000493758 NBPF26B4DH59 902 aa10.52□□□□□ -0.73
ITGB1-216ENST00000493758 PACS2Q86VP3 889 aa10.52□□□□□ -0.73
ITGB1-216ENST00000493758 SPNS2Q8IVW8 549 aa10.52□□□□□ -0.73
ITGB1-216ENST00000493758 KIAA1468Q9P260 1216 aa10.51□□□□□ -0.73
ITGB1-216ENST00000493758 ZC3H15Q8WU90 426 aaKnown RBP10.5□□□□□ -0.73
ITGB1-216ENST00000493758 ZMYND10O75800 440 aa10.49□□□□□ -0.73
ITGB1-216ENST00000493758 MAP2K5Q13163 448 aa10.49□□□□□ -0.73
ITGB1-216ENST00000493758 ADGRG1Q9Y653 693 aa10.49□□□□□ -0.73
ITGB1-216ENST00000493758 FAM98CQ17RN3 349 aaKnown RBP10.48□□□□□ -0.73
ITGB1-216ENST00000493758 MRPL50Q8N5N7 158 aaKnown RBP10.47□□□□□ -0.73
ITGB1-216ENST00000493758 TATDN2Q93075 761 aa10.47□□□□□ -0.73
ITGB1-216ENST00000493758 BARGINQ6ZT62 677 aa10.46□□□□□ -0.73
ITGB1-216ENST00000493758 FECHP22830 423 aa10.45□□□□□ -0.74
ITGB1-216ENST00000493758 EYA1Q99502 592 aa10.45□□□□□ -0.74
ITGB1-216ENST00000493758 MYT1LQ9UL68 1186 aa10.45□□□□□ -0.74
ITGB1-216ENST00000493758 MINK1Q8N4C8 1332 aaPredicted RBP10.44□□□□□ -0.74
ITGB1-216ENST00000493758 C3orf80F5H4A9 247 aa10.44□□□□□ -0.74
ITGB1-216ENST00000493758 OATP04181 439 aa10.44□□□□□ -0.74
ITGB1-216ENST00000493758 NUDT18Q6ZVK8 323 aa10.43□□□□□ -0.74
ITGB1-216ENST00000493758 RBM46Q8TBY0 533 aaKnown RBP10.43□□□□□ -0.74
ITGB1-216ENST00000493758 METTL3Q86U44 580 aaKnown RBP10.42□□□□□ -0.74
ITGB1-216ENST00000493758 PXYLP1Q8TE99 480 aa10.42□□□□□ -0.74
ITGB1-216ENST00000493758 SEPT9Q9UHD8 586 aaPredicted RBP10.42□□□□□ -0.74
ITGB1-216ENST00000493758 PNMA3Q9UL41 463 aa10.42□□□□□ -0.74
ITGB1-216ENST00000493758 IRF6O14896 467 aa10.41□□□□□ -0.74
ITGB1-216ENST00000493758 MMRN1Q13201 1228 aa10.41□□□□□ -0.74
ITGB1-216ENST00000493758 ZFRQ96KR1 1074 aaKnown RBP10.4□□□□□ -0.74
ITGB1-216ENST00000493758 STAC3Q96MF2 364 aa10.4□□□□□ -0.74
ITGB1-216ENST00000493758 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.39□□□□□ -0.75
ITGB1-216ENST00000493758 DNAJB2P25686 324 aa10.38□□□□□ -0.75
ITGB1-216ENST00000493758 CCDC102AQ96A19 550 aa10.38□□□□□ -0.75
ITGB1-216ENST00000493758 RNF166Q96A37 237 aaPredicted RBP10.38□□□□□ -0.75
ITGB1-216ENST00000493758 ANKK1Q8NFD2 765 aa10.37□□□□□ -0.75
ITGB1-216ENST00000493758 TMEM134Q9H6X4 195 aa10.37□□□□□ -0.75
ITGB1-216ENST00000493758 SMAPO00193 183 aa10.36□□□□□ -0.75
ITGB1-216ENST00000493758 SOWAHBA6NEL2 793 aa10.35□□□□□ -0.75
ITGB1-216ENST00000493758 THSD4Q6ZMP0 1018 aa10.35□□□□□ -0.75
ITGB1-216ENST00000493758 WNT2BQ93097 391 aa10.35□□□□□ -0.75
ITGB1-216ENST00000493758 RCCD1A6NED2 376 aa10.34□□□□□ -0.75
ITGB1-216ENST00000493758 GOLGA8CPA6NN73 597 aa10.34□□□□□ -0.75
ITGB1-216ENST00000493758 FAM161AQ3B820 660 aa10.34□□□□□ -0.75
ITGB1-216ENST00000493758 LRCH3Q96II8 777 aa10.33□□□□□ -0.76
ITGB1-216ENST00000493758 PHOX2BQ99453 314 aa10.33□□□□□ -0.76
ITGB1-216ENST00000493758 AMHR2Q16671 573 aa10.32□□□□□ -0.76
ITGB1-216ENST00000493758 SAMD7Q7Z3H4 446 aa10.31□□□□□ -0.76
ITGB1-216ENST00000493758 NECTIN2Q92692 538 aa10.31□□□□□ -0.76
ITGB1-216ENST00000493758 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.31□□□□□ -0.76
ITGB1-216ENST00000493758 NYAP1Q6ZVC0 841 aa10.3□□□□□ -0.76
ITGB1-216ENST00000493758 KCTD12Q96CX2 325 aaKnown RBP10.3□□□□□ -0.76
ITGB1-216ENST00000493758 AK7Q96M32 723 aa10.3□□□□□ -0.76
ITGB1-216ENST00000493758 SWT1Q5T5J6 900 aaKnown RBP10.29□□□□□ -0.76
ITGB1-216ENST00000493758 SLF2Q8IX21 1173 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms