RNA–Protein interactions for RNA: ENST00000493109.2

COL12A1-209, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-209ENST00000493109 RABGEF1Q9UJ41 708 aa15.48■□□□□ 0.07
COL12A1-209ENST00000493109 FBXW7Q969H0 707 aa15.47■□□□□ 0.07
COL12A1-209ENST00000493109 C6orf132Q5T0Z8 1188 aa15.41■□□□□ 0.06
COL12A1-209ENST00000493109 A0A0G2JS52 829 aa15.39■□□□□ 0.05
COL12A1-209ENST00000493109 BCAMP50895 628 aa15.39■□□□□ 0.05
COL12A1-209ENST00000493109 EPAS1Q99814 870 aa15.39■□□□□ 0.05
COL12A1-209ENST00000493109 KIAA1468Q9P260 1216 aa15.39■□□□□ 0.05
COL12A1-209ENST00000493109 BBXQ8WY36 941 aaPredicted RBP15.37■□□□□ 0.05
COL12A1-209ENST00000493109 ANKK1Q8NFD2 765 aa15.36■□□□□ 0.05
COL12A1-209ENST00000493109 DDX12PQ92771 950 aa15.36■□□□□ 0.05
COL12A1-209ENST00000493109 LAPTM4BQ86VI4 370 aa15.35■□□□□ 0.05
COL12A1-209ENST00000493109 RBM33Q96EV2 1170 aaKnown RBP15.35■□□□□ 0.05
COL12A1-209ENST00000493109 SEPT9Q9UHD8 586 aaPredicted RBP15.35■□□□□ 0.05
COL12A1-209ENST00000493109 SOWAHBA6NEL2 793 aa15.33■□□□□ 0.04
COL12A1-209ENST00000493109 ZFRQ96KR1 1074 aaKnown RBP15.33■□□□□ 0.04
COL12A1-209ENST00000493109 TRIM6-TRIM34B2RNG4 842 aa15.32■□□□□ 0.04
COL12A1-209ENST00000493109 ONECUT3O60422 494 aaPredicted RBP15.32■□□□□ 0.04
COL12A1-209ENST00000493109 ITGBL1O95965 494 aaPredicted RBP15.3■□□□□ 0.04
COL12A1-209ENST00000493109 RGS20O76081 388 aa15.29■□□□□ 0.04
COL12A1-209ENST00000493109 PDIA6Q15084 440 aa15.29■□□□□ 0.04
COL12A1-209ENST00000493109 TSR1Q2NL82 804 aaKnown RBP15.28■□□□□ 0.04
COL12A1-209ENST00000493109 WBP1LQ9NX94 342 aa15.27■□□□□ 0.04
COL12A1-209ENST00000493109 EN1Q05925 392 aaPredicted RBP15.26■□□□□ 0.03
COL12A1-209ENST00000493109 PRIM1P49642 420 aaKnown RBP15.25■□□□□ 0.03
COL12A1-209ENST00000493109 NBR1Q14596 966 aa15.25■□□□□ 0.03
COL12A1-209ENST00000493109 TSKSQ9UJT2 592 aa15.24■□□□□ 0.03
COL12A1-209ENST00000493109 FAM98CQ17RN3 349 aaKnown RBP15.23■□□□□ 0.03
COL12A1-209ENST00000493109 MAP3K7O43318 606 aa15.19■□□□□ 0.02
COL12A1-209ENST00000493109 SPRYD3Q8NCJ5 442 aa15.19■□□□□ 0.02
COL12A1-209ENST00000493109 FAM198AQ9UFP1 575 aa15.19■□□□□ 0.02
COL12A1-209ENST00000493109 C3orf80F5H4A9 247 aa15.17■□□□□ 0.02
COL12A1-209ENST00000493109 SPDYE16A6NNV3 312 aaPredicted RBP15.16■□□□□ 0.02
COL12A1-209ENST00000493109 NYAP1Q6ZVC0 841 aa15.16■□□□□ 0.02
COL12A1-209ENST00000493109 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.15■□□□□ 0.02
COL12A1-209ENST00000493109 IRX2Q9BZI1 471 aaPredicted RBP15.14■□□□□ 0.01
COL12A1-209ENST00000493109 HPS5Q9UPZ3 1129 aa15.14■□□□□ 0.01
COL12A1-209ENST00000493109 E2F4Q16254 413 aa15.13■□□□□ 0.01
COL12A1-209ENST00000493109 LRCH3Q96II8 777 aa15.13■□□□□ 0.01
COL12A1-209ENST00000493109 TSR3Q9UJK0 312 aaKnown RBP15.13■□□□□ 0.01
COL12A1-209ENST00000493109 ARIH1Q9Y4X5 557 aaPredicted RBP15.13■□□□□ 0.01
COL12A1-209ENST00000493109 SMAPO00193 183 aa15.11■□□□□ 0.01
COL12A1-209ENST00000493109 CDCA7LQ96GN5 454 aa15.11■□□□□ 0.01
COL12A1-209ENST00000493109 PACS2Q86VP3 889 aa15.09■□□□□ 0.01
COL12A1-209ENST00000493109 PRSS12P56730 875 aa15.08■□□□□ 0
COL12A1-209ENST00000493109 KCNC4Q03721 635 aa15.08■□□□□ 0
COL12A1-209ENST00000493109 CDHR5Q9HBB8 845 aa15.08■□□□□ 0
COL12A1-209ENST00000493109 GRXCR2A6NFK2 248 aa15.07■□□□□ 0
COL12A1-209ENST00000493109 PAXIP1Q6ZW49 1069 aaPredicted RBP15.06■□□□□ 0
COL12A1-209ENST00000493109 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.06■□□□□ 0
COL12A1-209ENST00000493109 OSBPP22059 807 aa15.05■□□□□ -0
COL12A1-209ENST00000493109 SAMD7Q7Z3H4 446 aa15.04■□□□□ -0
COL12A1-209ENST00000493109 CFAP44Q96MT7 982 aa15.04■□□□□ -0
COL12A1-209ENST00000493109 RTN4Q9NQC3 1192 aaKnown RBP15.04■□□□□ -0
COL12A1-209ENST00000493109 TATDN2Q93075 761 aa15□□□□□ -0.01
COL12A1-209ENST00000493109 AMER1Q5JTC6 1135 aaPredicted RBP14.99□□□□□ -0.01
COL12A1-209ENST00000493109 PPP4CP60510 307 aa14.98□□□□□ -0.01
COL12A1-209ENST00000493109 TJAP1Q5JTD0 557 aa14.98□□□□□ -0.01
COL12A1-209ENST00000493109 CERKQ8TCT0 537 aa14.98□□□□□ -0.01
COL12A1-209ENST00000493109 PNMA3Q9UL41 463 aa14.98□□□□□ -0.01
COL12A1-209ENST00000493109 WDR70Q9NW82 654 aa14.96□□□□□ -0.01
COL12A1-209ENST00000493109 NBPF26B4DH59 902 aa14.95□□□□□ -0.02
COL12A1-209ENST00000493109 NPDC1Q9NQX5 325 aaPredicted RBP14.94□□□□□ -0.02
COL12A1-209ENST00000493109 NUDT18Q6ZVK8 323 aa14.93□□□□□ -0.02
COL12A1-209ENST00000493109 TTC13Q8NBP0 860 aa14.93□□□□□ -0.02
COL12A1-209ENST00000493109 RBM27Q9P2N5 1060 aaKnown RBP14.92□□□□□ -0.02
COL12A1-209ENST00000493109 MTRQ99707 1265 aa14.91□□□□□ -0.02
COL12A1-209ENST00000493109 APLP1P51693 650 aa14.87□□□□□ -0.03
COL12A1-209ENST00000493109 PADI6Q6TGC4 694 aa14.87□□□□□ -0.03
COL12A1-209ENST00000493109 ZNF516Q92618 1163 aa14.86□□□□□ -0.03
COL12A1-209ENST00000493109 LCE2BO14633 110 aa14.85□□□□□ -0.03
COL12A1-209ENST00000493109 Q6ZNB5 142 aa14.83□□□□□ -0.04
COL12A1-209ENST00000493109 IL21Q9HBE4 155 aa14.83□□□□□ -0.04
COL12A1-209ENST00000493109 RNF40O75150 1001 aa14.82□□□□□ -0.04
COL12A1-209ENST00000493109 MLLT3P42568 568 aaPredicted RBP14.81□□□□□ -0.04
COL12A1-209ENST00000493109 SWT1Q5T5J6 900 aaKnown RBP14.81□□□□□ -0.04
COL12A1-209ENST00000493109 PPP1R18Q6NYC8 613 aa14.8□□□□□ -0.04
COL12A1-209ENST00000493109 NKX2-3Q8TAU0 364 aa14.78□□□□□ -0.04
COL12A1-209ENST00000493109 EYA1Q99502 592 aa14.77□□□□□ -0.05
COL12A1-209ENST00000493109 PRKD2Q9BZL6 878 aa14.77□□□□□ -0.05
COL12A1-209ENST00000493109 TSHZ2Q9NRE2 1034 aa14.76□□□□□ -0.05
COL12A1-209ENST00000493109 KCNV2Q8TDN2 545 aa14.75□□□□□ -0.05
COL12A1-209ENST00000493109 GFRA3O60609 400 aa14.71□□□□□ -0.05
COL12A1-209ENST00000493109 HDGFP51858 240 aaKnown RBP14.71□□□□□ -0.05
COL12A1-209ENST00000493109 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.71□□□□□ -0.05
COL12A1-209ENST00000493109 COPS2P61201 443 aa14.7□□□□□ -0.06
COL12A1-209ENST00000493109 SLF2Q8IX21 1173 aa14.7□□□□□ -0.06
COL12A1-209ENST00000493109 ARHGEF1Q92888 912 aaKnown RBP14.7□□□□□ -0.06
COL12A1-209ENST00000493109 LAPTM4AQ15012 233 aa14.68□□□□□ -0.06
COL12A1-209ENST00000493109 PTGDRQ13258 359 aa14.67□□□□□ -0.06
COL12A1-209ENST00000493109 V9GY48 417 aaPredicted RBP14.67□□□□□ -0.06
COL12A1-209ENST00000493109 ZPR1O75312 459 aa14.62□□□□□ -0.07
COL12A1-209ENST00000493109 NECTIN2Q92692 538 aa14.62□□□□□ -0.07
COL12A1-209ENST00000493109 NRG2O14511 850 aaPredicted RBP14.61□□□□□ -0.07
COL12A1-209ENST00000493109 TRAF7Q6Q0C0 670 aa14.61□□□□□ -0.07
COL12A1-209ENST00000493109 ADGRG1Q9Y653 693 aa14.61□□□□□ -0.07
COL12A1-209ENST00000493109 FAM161AQ3B820 660 aa14.6□□□□□ -0.07
COL12A1-209ENST00000493109 DNAJB2P25686 324 aa14.58□□□□□ -0.08
COL12A1-209ENST00000493109 BLOC1S3Q6QNY0 202 aa14.58□□□□□ -0.08
COL12A1-209ENST00000493109 EMID1Q96A84 441 aaPredicted RBP14.58□□□□□ -0.08
COL12A1-209ENST00000493109 TMEM134Q9H6X4 195 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms