RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 PTPRKQ15262 1439 aa5.29□□□□□ -1.56
ATPAF1-206ENST00000492233 ZNF692Q9BU19 519 aaPredicted RBP5.28□□□□□ -1.56
ATPAF1-206ENST00000492233 AKNAQ7Z591 1439 aa5.28□□□□□ -1.56
ATPAF1-206ENST00000492233 UACAQ9BZF9 1416 aa5.28□□□□□ -1.56
ATPAF1-206ENST00000492233 IQGAP2Q13576 1575 aa5.28□□□□□ -1.56
ATPAF1-206ENST00000492233 KIAA0586Q9BVV6 1533 aa5.28□□□□□ -1.56
ATPAF1-206ENST00000492233 PBRM1Q86U86 1689 aa5.28□□□□□ -1.56
ATPAF1-206ENST00000492233 HECW1Q76N89 1606 aa5.27□□□□□ -1.57
ATPAF1-206ENST00000492233 A6NJR5 290 aa5.27□□□□□ -1.57
ATPAF1-206ENST00000492233 NAIPQ13075 1403 aa5.27□□□□□ -1.57
ATPAF1-206ENST00000492233 POLA2Q14181 598 aa5.27□□□□□ -1.57
ATPAF1-206ENST00000492233 BARGINQ6ZT62 677 aa5.27□□□□□ -1.57
ATPAF1-206ENST00000492233 SUPT6HQ7KZ85 1726 aaKnown RBP5.27□□□□□ -1.57
ATPAF1-206ENST00000492233 CLUAP1Q96AJ1 413 aa5.27□□□□□ -1.57
ATPAF1-206ENST00000492233 MIA2Q96PC5 1412 aa5.27□□□□□ -1.57
ATPAF1-206ENST00000492233 MYT1LQ9UL68 1186 aa5.27□□□□□ -1.57
ATPAF1-206ENST00000492233 EPRSP07814 1512 aaKnown RBP5.27□□□□□ -1.57
ATPAF1-206ENST00000492233 MAGI3Q5TCQ9 1506 aa5.27□□□□□ -1.57
ATPAF1-206ENST00000492233 ARID4BQ4LE39 1312 aaPredicted RBP5.26□□□□□ -1.57
ATPAF1-206ENST00000492233 PPP1R15AO75807 674 aaPredicted RBP5.26□□□□□ -1.57
ATPAF1-206ENST00000492233 CCDC97Q96F63 343 aaPredicted RBP5.26□□□□□ -1.57
ATPAF1-206ENST00000492233 SIN3AQ96ST3 1273 aa5.26□□□□□ -1.57
ATPAF1-206ENST00000492233 ZNF777Q9ULD5 760 aaPredicted RBP5.26□□□□□ -1.57
ATPAF1-206ENST00000492233 ZNF608Q9ULD9 1512 aaPredicted RBP5.26□□□□□ -1.57
ATPAF1-206ENST00000492233 PTPN23Q9H3S7 1636 aa5.26□□□□□ -1.57
ATPAF1-206ENST00000492233 LRRIQ1Q96JM4 1722 aa5.26□□□□□ -1.57
ATPAF1-206ENST00000492233 STK25O00506 426 aa5.25□□□□□ -1.57
ATPAF1-206ENST00000492233 NEFLP07196 543 aa5.25□□□□□ -1.57
ATPAF1-206ENST00000492233 KRI1Q8N9T8 703 aaKnown RBP5.25□□□□□ -1.57
ATPAF1-206ENST00000492233 RNF25Q96BH1 459 aaPredicted RBP5.25□□□□□ -1.57
ATPAF1-206ENST00000492233 CWC22Q9HCG8 908 aaKnown RBP5.25□□□□□ -1.57
ATPAF1-206ENST00000492233 RYDENQ9NUL5 291 aaKnown RBP5.25□□□□□ -1.57
ATPAF1-206ENST00000492233 SERPINA10Q9UK55 444 aa5.25□□□□□ -1.57
ATPAF1-206ENST00000492233 DISP1Q96F81 1524 aa5.24□□□□□ -1.57
ATPAF1-206ENST00000492233 TESPA1A2RU30 521 aaPredicted RBP5.24□□□□□ -1.57
ATPAF1-206ENST00000492233 SEMA3EO15041 775 aa5.24□□□□□ -1.57
ATPAF1-206ENST00000492233 RETREG2Q8NC44 543 aa5.24□□□□□ -1.57
ATPAF1-206ENST00000492233 YTHDC1Q96MU7 727 aaKnown RBP5.24□□□□□ -1.57
ATPAF1-206ENST00000492233 STAG3Q9UJ98 1225 aa5.24□□□□□ -1.57
ATPAF1-206ENST00000492233 GRIN2AQ12879 1464 aa5.24□□□□□ -1.57
ATPAF1-206ENST00000492233 MAGI1Q96QZ7 1491 aaPredicted RBP5.24□□□□□ -1.57
ATPAF1-206ENST00000492233 KIAA0556O60303 1618 aa5.23□□□□□ -1.57
ATPAF1-206ENST00000492233 IRF5Q13568 498 aa5.23□□□□□ -1.57
ATPAF1-206ENST00000492233 POTEHQ6S545 545 aa5.23□□□□□ -1.57
ATPAF1-206ENST00000492233 ARHGEF1Q92888 912 aaKnown RBP5.23□□□□□ -1.57
ATPAF1-206ENST00000492233 ROCK1Q13464 1354 aa5.23□□□□□ -1.57
ATPAF1-206ENST00000492233 CDK13Q14004 1512 aaKnown RBP5.23□□□□□ -1.57
ATPAF1-206ENST00000492233 SYNJ2O15056 1496 aa5.22□□□□□ -1.57
ATPAF1-206ENST00000492233 NUP153P49790 1475 aaKnown RBP5.22□□□□□ -1.57
ATPAF1-206ENST00000492233 TONSLQ96HA7 1378 aa5.22□□□□□ -1.57
ATPAF1-206ENST00000492233 PSMD1Q99460 953 aa5.22□□□□□ -1.57
ATPAF1-206ENST00000492233 BCCIPQ9P287 314 aaKnown RBP eCLIP5.22□□□□□ -1.57
ATPAF1-206ENST00000492233 KDM5BQ9UGL1 1544 aa5.22□□□□□ -1.57
ATPAF1-206ENST00000492233 NUP160Q12769 1436 aa5.22□□□□□ -1.57
ATPAF1-206ENST00000492233 EIF4G3O43432 1585 aaKnown RBP5.21□□□□□ -1.57
ATPAF1-206ENST00000492233 DENND4BO75064 1496 aaPredicted RBP5.21□□□□□ -1.58
ATPAF1-206ENST00000492233 PDE4DQ08499 809 aa5.21□□□□□ -1.58
ATPAF1-206ENST00000492233 SMYD5Q6GMV2 418 aa5.21□□□□□ -1.58
ATPAF1-206ENST00000492233 CERS3Q8IU89 383 aa5.21□□□□□ -1.58
ATPAF1-206ENST00000492233 ZNF592Q92610 1267 aa5.21□□□□□ -1.58
ATPAF1-206ENST00000492233 ABCC5O15440 1437 aa5.21□□□□□ -1.58
ATPAF1-206ENST00000492233 TROQ12816 1431 aaPredicted RBP5.21□□□□□ -1.58
ATPAF1-206ENST00000492233 GCC2Q8IWJ2 1684 aa5.21□□□□□ -1.58
ATPAF1-206ENST00000492233 RAPGEF6Q8TEU7 1601 aa5.2□□□□□ -1.58
ATPAF1-206ENST00000492233 CCER2I3L3R5 266 aa5.2□□□□□ -1.58
ATPAF1-206ENST00000492233 RIOK3O14730 519 aaKnown RBP5.2□□□□□ -1.58
ATPAF1-206ENST00000492233 CLSTN1O94985 981 aa5.2□□□□□ -1.58
ATPAF1-206ENST00000492233 CADPS2Q86UW7 1296 aa5.2□□□□□ -1.58
ATPAF1-206ENST00000492233 TICAM2Q86XR7 235 aa5.2□□□□□ -1.58
ATPAF1-206ENST00000492233 CCDC125Q86Z20 511 aa5.2□□□□□ -1.58
ATPAF1-206ENST00000492233 ZFP91Q96JP5 570 aaPredicted RBP5.2□□□□□ -1.58
ATPAF1-206ENST00000492233 FAM117AQ9C073 453 aa5.2□□□□□ -1.58
ATPAF1-206ENST00000492233 BCL11AQ9H165 835 aa5.2□□□□□ -1.58
ATPAF1-206ENST00000492233 RRP7BPQ9NSQ0 103 aa5.2□□□□□ -1.58
ATPAF1-206ENST00000492233 AMOTL2Q9Y2J4 779 aa5.2□□□□□ -1.58
ATPAF1-206ENST00000492233 DAPK1P53355 1430 aa5.2□□□□□ -1.58
ATPAF1-206ENST00000492233 ERCC6Q03468 1493 aa5.2□□□□□ -1.58
ATPAF1-206ENST00000492233 DDX10Q13206 875 aaKnown RBP5.19□□□□□ -1.58
ATPAF1-206ENST00000492233 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.19□□□□□ -1.58
ATPAF1-206ENST00000492233 CARMIL2Q6F5E8 1435 aa5.19□□□□□ -1.58
ATPAF1-206ENST00000492233 CEP170Q5SW79 1584 aa5.19□□□□□ -1.58
ATPAF1-206ENST00000492233 PATL2C9JE40 543 aaKnown RBP5.18□□□□□ -1.58
ATPAF1-206ENST00000492233 TRIM66O15016 1216 aa5.18□□□□□ -1.58
ATPAF1-206ENST00000492233 CHMP7Q8WUX9 453 aaPredicted RBP5.18□□□□□ -1.58
ATPAF1-206ENST00000492233 JPH4Q96JJ6 628 aa5.18□□□□□ -1.58
ATPAF1-206ENST00000492233 MPHOSPH9Q99550 1183 aa5.18□□□□□ -1.58
ATPAF1-206ENST00000492233 CHIC2Q9UKJ5 165 aa5.18□□□□□ -1.58
ATPAF1-206ENST00000492233 DNMT1P26358 1616 aaKnown RBP5.18□□□□□ -1.58
ATPAF1-206ENST00000492233 ADGRL2O95490 1459 aa5.18□□□□□ -1.58
ATPAF1-206ENST00000492233 ANKRD30BQ9BXX2 1392 aa5.17□□□□□ -1.58
ATPAF1-206ENST00000492233 PRG4Q92954 1404 aaPredicted RBP5.17□□□□□ -1.58
ATPAF1-206ENST00000492233 KDM6BO15054 1643 aa5.17□□□□□ -1.58
ATPAF1-206ENST00000492233 ONECUT3O60422 494 aaPredicted RBP5.17□□□□□ -1.58
ATPAF1-206ENST00000492233 CANXP27824 592 aaKnown RBP5.17□□□□□ -1.58
ATPAF1-206ENST00000492233 BRPF3Q9ULD4 1205 aa5.17□□□□□ -1.58
ATPAF1-206ENST00000492233 STK24Q9Y6E0 443 aa5.17□□□□□ -1.58
ATPAF1-206ENST00000492233 GPATCH8Q9UKJ3 1502 aaKnown RBP5.17□□□□□ -1.58
ATPAF1-206ENST00000492233 ABCA8O94911 1581 aa5.16□□□□□ -1.58
ATPAF1-206ENST00000492233 ADCY10Q96PN6 1610 aa5.16□□□□□ -1.58
ATPAF1-206ENST00000492233 RPRD2Q5VT52 1461 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms