RNA–Protein interactions for RNA: ENST00000491816.1

PARP1-208, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2

Gene PARP1, Length 416 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-208ENST00000491816 CAMK2BQ13554 666 aa13.33□□□□□ -0.28
PARP1-208ENST00000491816 RABGEF1Q9UJ41 708 aa13.31□□□□□ -0.28
PARP1-208ENST00000491816 FBXW7Q969H0 707 aa13.3□□□□□ -0.28
PARP1-208ENST00000491816 C6orf132Q5T0Z8 1188 aa13.27□□□□□ -0.29
PARP1-208ENST00000491816 KIAA1468Q9P260 1216 aa13.27□□□□□ -0.29
PARP1-208ENST00000491816 RBM33Q96EV2 1170 aaKnown RBP13.26□□□□□ -0.29
PARP1-208ENST00000491816 BBXQ8WY36 941 aaPredicted RBP13.25□□□□□ -0.29
PARP1-208ENST00000491816 DDX12PQ92771 950 aa13.25□□□□□ -0.29
PARP1-208ENST00000491816 BCAMP50895 628 aa13.24□□□□□ -0.29
PARP1-208ENST00000491816 IFFO2Q5TF58 517 aa13.24□□□□□ -0.29
PARP1-208ENST00000491816 ANKK1Q8NFD2 765 aa13.24□□□□□ -0.29
PARP1-208ENST00000491816 EPAS1Q99814 870 aa13.24□□□□□ -0.29
PARP1-208ENST00000491816 SEPT9Q9UHD8 586 aaPredicted RBP13.22□□□□□ -0.29
PARP1-208ENST00000491816 A0A0G2JS52 829 aa13.19□□□□□ -0.3
PARP1-208ENST00000491816 ZFRQ96KR1 1074 aaKnown RBP13.19□□□□□ -0.3
PARP1-208ENST00000491816 CCDC180Q9P1Z9 1646 aa13.18□□□□□ -0.3
PARP1-208ENST00000491816 SOWAHBA6NEL2 793 aa13.18□□□□□ -0.3
PARP1-208ENST00000491816 LAPTM4BQ86VI4 370 aa13.18□□□□□ -0.3
PARP1-208ENST00000491816 TRIM6-TRIM34B2RNG4 842 aa13.16□□□□□ -0.3
PARP1-208ENST00000491816 ONECUT3O60422 494 aaPredicted RBP13.16□□□□□ -0.3
PARP1-208ENST00000491816 NBR1Q14596 966 aa13.14□□□□□ -0.31
PARP1-208ENST00000491816 TSR1Q2NL82 804 aaKnown RBP13.14□□□□□ -0.31
PARP1-208ENST00000491816 WBP1LQ9NX94 342 aa13.14□□□□□ -0.31
PARP1-208ENST00000491816 SPRYD3Q8NCJ5 442 aa13.13□□□□□ -0.31
PARP1-208ENST00000491816 RGS20O76081 388 aa13.12□□□□□ -0.31
PARP1-208ENST00000491816 EN1Q05925 392 aaPredicted RBP13.11□□□□□ -0.31
PARP1-208ENST00000491816 PDIA6Q15084 440 aa13.11□□□□□ -0.31
PARP1-208ENST00000491816 MAP3K7O43318 606 aa13.1□□□□□ -0.31
PARP1-208ENST00000491816 ITGBL1O95965 494 aaPredicted RBP13.1□□□□□ -0.31
PARP1-208ENST00000491816 TSKSQ9UJT2 592 aa13.1□□□□□ -0.31
PARP1-208ENST00000491816 FAM98CQ17RN3 349 aaKnown RBP13.09□□□□□ -0.31
PARP1-208ENST00000491816 PRIM1P49642 420 aaKnown RBP13.07□□□□□ -0.32
PARP1-208ENST00000491816 IRX2Q9BZI1 471 aaPredicted RBP13.06□□□□□ -0.32
PARP1-208ENST00000491816 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.06□□□□□ -0.32
PARP1-208ENST00000491816 E2F4Q16254 413 aa13.05□□□□□ -0.32
PARP1-208ENST00000491816 HPS5Q9UPZ3 1129 aa13.05□□□□□ -0.32
PARP1-208ENST00000491816 SPDYE16A6NNV3 312 aaPredicted RBP13.04□□□□□ -0.32
PARP1-208ENST00000491816 CFAP44Q96MT7 982 aa13.04□□□□□ -0.32
PARP1-208ENST00000491816 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.04□□□□□ -0.32
PARP1-208ENST00000491816 GRXCR2A6NFK2 248 aa13.03□□□□□ -0.32
PARP1-208ENST00000491816 SMAPO00193 183 aa13.03□□□□□ -0.32
PARP1-208ENST00000491816 NYAP1Q6ZVC0 841 aa13.03□□□□□ -0.32
PARP1-208ENST00000491816 PACS2Q86VP3 889 aa13.03□□□□□ -0.32
PARP1-208ENST00000491816 LRCH3Q96II8 777 aa13.03□□□□□ -0.32
PARP1-208ENST00000491816 FAM198AQ9UFP1 575 aa13.03□□□□□ -0.32
PARP1-208ENST00000491816 TSR3Q9UJK0 312 aaKnown RBP13.03□□□□□ -0.32
PARP1-208ENST00000491816 PAXIP1Q6ZW49 1069 aaPredicted RBP13.02□□□□□ -0.33
PARP1-208ENST00000491816 C3orf80F5H4A9 247 aa13.01□□□□□ -0.33
PARP1-208ENST00000491816 CDCA7LQ96GN5 454 aa13.01□□□□□ -0.33
PARP1-208ENST00000491816 KCNC4Q03721 635 aa13□□□□□ -0.33
PARP1-208ENST00000491816 PRSS12P56730 875 aa12.98□□□□□ -0.33
PARP1-208ENST00000491816 WDR70Q9NW82 654 aa12.97□□□□□ -0.33
PARP1-208ENST00000491816 SAMD7Q7Z3H4 446 aa12.96□□□□□ -0.33
PARP1-208ENST00000491816 RTN4Q9NQC3 1192 aaKnown RBP12.96□□□□□ -0.33
PARP1-208ENST00000491816 CDHR5Q9HBB8 845 aa12.95□□□□□ -0.34
PARP1-208ENST00000491816 ARIH1Q9Y4X5 557 aaPredicted RBP12.95□□□□□ -0.34
PARP1-208ENST00000491816 PPP4CP60510 307 aa12.94□□□□□ -0.34
PARP1-208ENST00000491816 OSBPP22059 807 aa12.93□□□□□ -0.34
PARP1-208ENST00000491816 AMER1Q5JTC6 1135 aaPredicted RBP12.93□□□□□ -0.34
PARP1-208ENST00000491816 TATDN2Q93075 761 aa12.92□□□□□ -0.34
PARP1-208ENST00000491816 PNMA3Q9UL41 463 aa12.92□□□□□ -0.34
PARP1-208ENST00000491816 CERKQ8TCT0 537 aa12.9□□□□□ -0.34
PARP1-208ENST00000491816 TJAP1Q5JTD0 557 aa12.87□□□□□ -0.35
PARP1-208ENST00000491816 NUDT18Q6ZVK8 323 aa12.87□□□□□ -0.35
PARP1-208ENST00000491816 NBPF26B4DH59 902 aa12.86□□□□□ -0.35
PARP1-208ENST00000491816 NPDC1Q9NQX5 325 aaPredicted RBP12.83□□□□□ -0.36
PARP1-208ENST00000491816 RNF40O75150 1001 aa12.82□□□□□ -0.36
PARP1-208ENST00000491816 MTRQ99707 1265 aa12.82□□□□□ -0.36
PARP1-208ENST00000491816 Q6ZNB5 142 aa12.8□□□□□ -0.36
PARP1-208ENST00000491816 ZNF516Q92618 1163 aa12.8□□□□□ -0.36
PARP1-208ENST00000491816 PADI6Q6TGC4 694 aa12.79□□□□□ -0.36
PARP1-208ENST00000491816 APLP1P51693 650 aa12.78□□□□□ -0.36
PARP1-208ENST00000491816 TTC13Q8NBP0 860 aa12.78□□□□□ -0.36
PARP1-208ENST00000491816 RBM27Q9P2N5 1060 aaKnown RBP12.78□□□□□ -0.36
PARP1-208ENST00000491816 HDGFP51858 240 aaKnown RBP12.77□□□□□ -0.37
PARP1-208ENST00000491816 IL21Q9HBE4 155 aa12.77□□□□□ -0.37
PARP1-208ENST00000491816 SWT1Q5T5J6 900 aaKnown RBP12.75□□□□□ -0.37
PARP1-208ENST00000491816 PPP1R18Q6NYC8 613 aa12.75□□□□□ -0.37
PARP1-208ENST00000491816 MLLT3P42568 568 aaPredicted RBP12.74□□□□□ -0.37
PARP1-208ENST00000491816 TSHZ2Q9NRE2 1034 aa12.74□□□□□ -0.37
PARP1-208ENST00000491816 NKX2-3Q8TAU0 364 aa12.73□□□□□ -0.37
PARP1-208ENST00000491816 PRKD2Q9BZL6 878 aa12.73□□□□□ -0.37
PARP1-208ENST00000491816 GFRA3O60609 400 aa12.7□□□□□ -0.38
PARP1-208ENST00000491816 EYA1Q99502 592 aa12.7□□□□□ -0.38
PARP1-208ENST00000491816 RB1CC1Q8TDY2 1594 aa12.69□□□□□ -0.38
PARP1-208ENST00000491816 COPS2P61201 443 aa12.69□□□□□ -0.38
PARP1-208ENST00000491816 LCE2BO14633 110 aa12.68□□□□□ -0.38
PARP1-208ENST00000491816 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.68□□□□□ -0.38
PARP1-208ENST00000491816 SLF2Q8IX21 1173 aa12.66□□□□□ -0.38
PARP1-208ENST00000491816 KCNV2Q8TDN2 545 aa12.66□□□□□ -0.38
PARP1-208ENST00000491816 ARHGEF1Q92888 912 aaKnown RBP12.66□□□□□ -0.38
PARP1-208ENST00000491816 LAPTM4AQ15012 233 aa12.64□□□□□ -0.39
PARP1-208ENST00000491816 PTGDRQ13258 359 aa12.61□□□□□ -0.39
PARP1-208ENST00000491816 V9GY48 417 aaPredicted RBP12.61□□□□□ -0.39
PARP1-208ENST00000491816 TRAF7Q6Q0C0 670 aa12.6□□□□□ -0.39
PARP1-208ENST00000491816 FAM161AQ3B820 660 aa12.59□□□□□ -0.39
PARP1-208ENST00000491816 NECTIN2Q92692 538 aa12.59□□□□□ -0.39
PARP1-208ENST00000491816 ZPR1O75312 459 aa12.58□□□□□ -0.4
PARP1-208ENST00000491816 SLC4A3P48751 1232 aa12.56□□□□□ -0.4
PARP1-208ENST00000491816 PCDHB3Q9Y5E6 796 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms