RNA–Protein interactions for RNA: ENST00000491160.1

PBX3-208, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-208ENST00000491160 NCKAP5LQ9HCH0 1330 aa10.82□□□□□ -0.68
PBX3-208ENST00000491160 TROQ12816 1431 aaPredicted RBP10.81□□□□□ -0.68
PBX3-208ENST00000491160 FMN1Q68DA7 1419 aa10.81□□□□□ -0.68
PBX3-208ENST00000491160 REREQ9P2R6 1566 aa10.81□□□□□ -0.68
PBX3-208ENST00000491160 MLH3Q9UHC1 1453 aa10.81□□□□□ -0.68
PBX3-208ENST00000491160 CAMSAP1Q5T5Y3 1602 aa10.8□□□□□ -0.68
PBX3-208ENST00000491160 UBAP1LF5GYI3 381 aa10.8□□□□□ -0.68
PBX3-208ENST00000491160 ZNF335Q9H4Z2 1342 aaPredicted RBP10.8□□□□□ -0.68
PBX3-208ENST00000491160 ARHGAP35Q9NRY4 1499 aa10.8□□□□□ -0.68
PBX3-208ENST00000491160 IQSEC2Q5JU85 1478 aa10.79□□□□□ -0.68
PBX3-208ENST00000491160 AGLP35573 1532 aa10.79□□□□□ -0.68
PBX3-208ENST00000491160 KIDINS220Q9ULH0 1771 aa10.78□□□□□ -0.68
PBX3-208ENST00000491160 CLIP1P30622 1438 aa10.78□□□□□ -0.68
PBX3-208ENST00000491160 GABBR2O75899 941 aa10.78□□□□□ -0.68
PBX3-208ENST00000491160 ITSN2Q9NZM3 1697 aa10.78□□□□□ -0.68
PBX3-208ENST00000491160 ABCC1P33527 1531 aa10.77□□□□□ -0.69
PBX3-208ENST00000491160 PREX2Q70Z35 1606 aa10.76□□□□□ -0.69
PBX3-208ENST00000491160 CHADLQ6NUI6 762 aa10.76□□□□□ -0.69
PBX3-208ENST00000491160 ZNF777Q9ULD5 760 aaPredicted RBP10.76□□□□□ -0.69
PBX3-208ENST00000491160 ZMYM3Q14202 1370 aa10.76□□□□□ -0.69
PBX3-208ENST00000491160 CNTLNQ9NXG0 1405 aa10.75□□□□□ -0.69
PBX3-208ENST00000491160 SUPT6HQ7KZ85 1726 aaKnown RBP10.75□□□□□ -0.69
PBX3-208ENST00000491160 CLTCQ00610 1675 aaKnown RBP10.74□□□□□ -0.69
PBX3-208ENST00000491160 CDC42BPAQ5VT25 1732 aa10.74□□□□□ -0.69
PBX3-208ENST00000491160 MROH2AA6NES4 1674 aa10.73□□□□□ -0.69
PBX3-208ENST00000491160 HNRNPMP52272 730 aaKnown RBP eCLIP10.73□□□□□ -0.69
PBX3-208ENST00000491160 NPATQ14207 1427 aa10.73□□□□□ -0.69
PBX3-208ENST00000491160 PIP4K2BP78356 416 aa10.72□□□□□ -0.69
PBX3-208ENST00000491160 SAMD9LQ8IVG5 1584 aa10.72□□□□□ -0.69
PBX3-208ENST00000491160 MYO3AQ8NEV4 1616 aa10.72□□□□□ -0.69
PBX3-208ENST00000491160 SPAG9O60271 1321 aaKnown RBP10.71□□□□□ -0.69
PBX3-208ENST00000491160 HSPA1LP34931 641 aa10.71□□□□□ -0.69
PBX3-208ENST00000491160 GGT6Q6P531 493 aa10.71□□□□□ -0.69
PBX3-208ENST00000491160 SYCP2Q9BX26 1530 aa10.7□□□□□ -0.7
PBX3-208ENST00000491160 PKD2Q13563 968 aa10.7□□□□□ -0.7
PBX3-208ENST00000491160 ZNF142P52746 1687 aaPredicted RBP10.69□□□□□ -0.7
PBX3-208ENST00000491160 CEP170BQ9Y4F5 1589 aaPredicted RBP10.69□□□□□ -0.7
PBX3-208ENST00000491160 PTPRKQ15262 1439 aa10.69□□□□□ -0.7
PBX3-208ENST00000491160 CLCN6P51797 869 aa10.69□□□□□ -0.7
PBX3-208ENST00000491160 LHX8Q68G74 356 aa10.69□□□□□ -0.7
PBX3-208ENST00000491160 TCOF1Q13428 1488 aaKnown RBP10.68□□□□□ -0.7
PBX3-208ENST00000491160 PLA2R1Q13018 1463 aa10.68□□□□□ -0.7
PBX3-208ENST00000491160 CCDC18Q5T9S5 1454 aa10.68□□□□□ -0.7
PBX3-208ENST00000491160 CASKIN1Q8WXD9 1431 aa10.67□□□□□ -0.7
PBX3-208ENST00000491160 MED1Q15648 1581 aaPredicted RBP10.67□□□□□ -0.7
PBX3-208ENST00000491160 ATP7AQ04656 1500 aa10.67□□□□□ -0.7
PBX3-208ENST00000491160 GPATCH8Q9UKJ3 1502 aaKnown RBP10.67□□□□□ -0.7
PBX3-208ENST00000491160 A2MP01023 1474 aa10.67□□□□□ -0.7
PBX3-208ENST00000491160 PLXNC1O60486 1568 aa10.65□□□□□ -0.7
PBX3-208ENST00000491160 CD44P16070 742 aaKnown RBP10.65□□□□□ -0.7
PBX3-208ENST00000491160 DNMT1P26358 1616 aaKnown RBP10.65□□□□□ -0.7
PBX3-208ENST00000491160 INO80Q9ULG1 1556 aaPredicted RBP10.65□□□□□ -0.71
PBX3-208ENST00000491160 TOM1O60784 492 aa10.64□□□□□ -0.71
PBX3-208ENST00000491160 FBXO31Q5XUX0 539 aaPredicted RBP10.64□□□□□ -0.71
PBX3-208ENST00000491160 CFDP1Q9UEE9 299 aaPredicted RBP10.64□□□□□ -0.71
PBX3-208ENST00000491160 FARP1Q9Y4F1 1045 aaPredicted RBP10.63□□□□□ -0.71
PBX3-208ENST00000491160 A2ML1A8K2U0 1454 aa10.62□□□□□ -0.71
PBX3-208ENST00000491160 ZNF644Q9H582 1327 aaPredicted RBP10.62□□□□□ -0.71
PBX3-208ENST00000491160 POLR1AO95602 1720 aaPredicted RBP10.62□□□□□ -0.71
PBX3-208ENST00000491160 SHANK2Q9UPX8 1470 aa10.61□□□□□ -0.71
PBX3-208ENST00000491160 NEURL4Q96JN8 1562 aa10.61□□□□□ -0.71
PBX3-208ENST00000491160 KIAA1107Q9UPP5 1409 aa10.61□□□□□ -0.71
PBX3-208ENST00000491160 CCNB3Q8WWL7 1395 aa10.61□□□□□ -0.71
PBX3-208ENST00000491160 ADGBQ8N7X0 1667 aa10.6□□□□□ -0.71
PBX3-208ENST00000491160 CPS1P31327 1500 aa10.6□□□□□ -0.71
PBX3-208ENST00000491160 FYCO1Q9BQS8 1478 aa10.6□□□□□ -0.71
PBX3-208ENST00000491160 TNRQ92752 1358 aa10.59□□□□□ -0.71
PBX3-208ENST00000491160 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.59□□□□□ -0.71
PBX3-208ENST00000491160 PLEKHH2Q8IVE3 1493 aa10.59□□□□□ -0.71
PBX3-208ENST00000491160 ALKQ9UM73 1620 aa10.58□□□□□ -0.72
PBX3-208ENST00000491160 VWDEQ8N2E2 1590 aa10.58□□□□□ -0.72
PBX3-208ENST00000491160 ANKLE2Q86XL3 938 aa10.58□□□□□ -0.72
PBX3-208ENST00000491160 KIF3BO15066 747 aa10.57□□□□□ -0.72
PBX3-208ENST00000491160 DHX29Q7Z478 1369 aaKnown RBP10.56□□□□□ -0.72
PBX3-208ENST00000491160 WASHC2CQ9Y4E1 1318 aa10.56□□□□□ -0.72
PBX3-208ENST00000491160 MBD5Q9P267 1494 aa10.55□□□□□ -0.72
PBX3-208ENST00000491160 STRCP1A6NGW2 1772 aa10.55□□□□□ -0.72
PBX3-208ENST00000491160 THEMISQ8N1K5 641 aaPredicted RBP10.55□□□□□ -0.72
PBX3-208ENST00000491160 STAG3Q9UJ98 1225 aa10.55□□□□□ -0.72
PBX3-208ENST00000491160 NPHP4O75161 1426 aaPredicted RBP10.55□□□□□ -0.72
PBX3-208ENST00000491160 MTUS2Q5JR59 1369 aa10.54□□□□□ -0.72
PBX3-208ENST00000491160 TIAM1Q13009 1591 aa10.54□□□□□ -0.72
PBX3-208ENST00000491160 PZPP20742 1482 aa10.54□□□□□ -0.72
PBX3-208ENST00000491160 SRCAPQ6ZRS2 3230 aa10.53□□□□□ -0.72
PBX3-208ENST00000491160 UGGT1Q9NYU2 1555 aa10.53□□□□□ -0.72
PBX3-208ENST00000491160 MIA2Q96PC5 1412 aa10.53□□□□□ -0.72
PBX3-208ENST00000491160 RGS17Q9UGC6 210 aaPredicted RBP10.53□□□□□ -0.72
PBX3-208ENST00000491160 KDM5DQ9BY66 1539 aa10.53□□□□□ -0.72
PBX3-208ENST00000491160 RTEL1-TNFRSF6BF6WH68 1400 aa10.52□□□□□ -0.73
PBX3-208ENST00000491160 DCBLD2Q96PD2 775 aa10.52□□□□□ -0.73
PBX3-208ENST00000491160 MED14O60244 1454 aa10.52□□□□□ -0.73
PBX3-208ENST00000491160 IQGAP1P46940 1657 aa10.52□□□□□ -0.73
PBX3-208ENST00000491160 CFAP65Q6ZU64 1925 aaKnown RBP10.52□□□□□ -0.73
PBX3-208ENST00000491160 LRRC7Q96NW7 1537 aa10.52□□□□□ -0.73
PBX3-208ENST00000491160 DEPDC5O75140 1603 aa10.51□□□□□ -0.73
PBX3-208ENST00000491160 FAM135AQ9P2D6 1515 aa10.51□□□□□ -0.73
PBX3-208ENST00000491160 NLRP1Q9C000 1473 aa10.49□□□□□ -0.73
PBX3-208ENST00000491160 ZNF579Q8NAF0 562 aaKnown RBP10.49□□□□□ -0.73
PBX3-208ENST00000491160 CCDC141Q6ZP82 1450 aa10.49□□□□□ -0.73
PBX3-208ENST00000491160 RNF17Q9BXT8 1623 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms