RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 SETD1BQ9UPS6 1966 aaKnown RBP14.65□□□□□ -0.06
SUPT20H-220ENST00000490716 ERBINQ96RT1 1412 aa14.65□□□□□ -0.06
SUPT20H-220ENST00000490716 ABCC3O15438 1527 aa14.65□□□□□ -0.07
SUPT20H-220ENST00000490716 SPATA31D1Q6ZQQ2 1576 aa14.64□□□□□ -0.07
SUPT20H-220ENST00000490716 NPATQ14207 1427 aa14.63□□□□□ -0.07
SUPT20H-220ENST00000490716 NCOA1Q15788 1441 aa14.63□□□□□ -0.07
SUPT20H-220ENST00000490716 CNTLNQ9NXG0 1405 aa14.62□□□□□ -0.07
SUPT20H-220ENST00000490716 SPAG9O60271 1321 aaKnown RBP14.61□□□□□ -0.07
SUPT20H-220ENST00000490716 IQGAP3Q86VI3 1631 aa14.61□□□□□ -0.07
SUPT20H-220ENST00000490716 PIK3C2BO00750 1634 aa14.6□□□□□ -0.07
SUPT20H-220ENST00000490716 PZPP20742 1482 aa14.59□□□□□ -0.07
SUPT20H-220ENST00000490716 ROCK1Q13464 1354 aa14.59□□□□□ -0.07
SUPT20H-220ENST00000490716 ARHGAP31Q2M1Z3 1444 aa14.57□□□□□ -0.08
SUPT20H-220ENST00000490716 TET3O43151 1660 aa14.56□□□□□ -0.08
SUPT20H-220ENST00000490716 UBR1Q8IWV7 1749 aa14.56□□□□□ -0.08
SUPT20H-220ENST00000490716 PPP6R1Q9UPN7 881 aa14.56□□□□□ -0.08
SUPT20H-220ENST00000490716 POLR1AO95602 1720 aaPredicted RBP14.56□□□□□ -0.08
SUPT20H-220ENST00000490716 EFCAB6Q5THR3 1501 aa14.55□□□□□ -0.08
SUPT20H-220ENST00000490716 E9PCH4 1651 aa14.55□□□□□ -0.08
SUPT20H-220ENST00000490716 SYNMO15061 1565 aa14.55□□□□□ -0.08
SUPT20H-220ENST00000490716 CEP170BQ9Y4F5 1589 aaPredicted RBP14.54□□□□□ -0.08
SUPT20H-220ENST00000490716 NEURL4Q96JN8 1562 aa14.54□□□□□ -0.08
SUPT20H-220ENST00000490716 ZMYM3Q14202 1370 aa14.51□□□□□ -0.09
SUPT20H-220ENST00000490716 ZNF777Q9ULD5 760 aaPredicted RBP14.5□□□□□ -0.09
SUPT20H-220ENST00000490716 PLA2R1Q13018 1463 aa14.48□□□□□ -0.09
SUPT20H-220ENST00000490716 KIF15Q9NS87 1388 aa14.48□□□□□ -0.09
SUPT20H-220ENST00000490716 ERVK-7P63135 1459 aa14.48□□□□□ -0.09
SUPT20H-220ENST00000490716 MYO5BQ9ULV0 1848 aa14.48□□□□□ -0.09
SUPT20H-220ENST00000490716 NOS1P29475 1434 aa14.46□□□□□ -0.09
SUPT20H-220ENST00000490716 A2ML1A8K2U0 1454 aa14.45□□□□□ -0.1
SUPT20H-220ENST00000490716 RPRD2Q5VT52 1461 aaKnown RBP14.45□□□□□ -0.1
SUPT20H-220ENST00000490716 SPHKAPQ2M3C7 1700 aa14.44□□□□□ -0.1
SUPT20H-220ENST00000490716 SLIT1O75093 1534 aa14.44□□□□□ -0.1
SUPT20H-220ENST00000490716 STRCP1A6NGW2 1772 aa14.44□□□□□ -0.1
SUPT20H-220ENST00000490716 TMEM131LA2VDJ0 1609 aa14.43□□□□□ -0.1
SUPT20H-220ENST00000490716 ARHGAP23Q9P227 1491 aa14.43□□□□□ -0.1
SUPT20H-220ENST00000490716 MED14O60244 1454 aa14.43□□□□□ -0.1
SUPT20H-220ENST00000490716 LTBP4Q8N2S1 1624 aa14.43□□□□□ -0.1
SUPT20H-220ENST00000490716 UGGT1Q9NYU2 1555 aa14.43□□□□□ -0.1
SUPT20H-220ENST00000490716 NAIPQ13075 1403 aa14.43□□□□□ -0.1
SUPT20H-220ENST00000490716 NLRP1Q9C000 1473 aa14.42□□□□□ -0.1
SUPT20H-220ENST00000490716 ANKRD30AQ9BXX3 1397 aa14.42□□□□□ -0.1
SUPT20H-220ENST00000490716 HFM1A2PYH4 1435 aa14.41□□□□□ -0.1
SUPT20H-220ENST00000490716 ANKRD50Q9ULJ7 1429 aa14.4□□□□□ -0.1
SUPT20H-220ENST00000490716 XIRP1Q702N8 1843 aaKnown RBP14.39□□□□□ -0.11
SUPT20H-220ENST00000490716 PTPRTO14522 1441 aa14.38□□□□□ -0.11
SUPT20H-220ENST00000490716 UHRF1BP1Q6BDS2 1440 aa14.38□□□□□ -0.11
SUPT20H-220ENST00000490716 IFT172Q9UG01 1749 aa14.38□□□□□ -0.11
SUPT20H-220ENST00000490716 CEBPAP49715 358 aaPredicted RBP14.38□□□□□ -0.11
SUPT20H-220ENST00000490716 AEBP2Q6ZN18 517 aaPredicted RBP14.38□□□□□ -0.11
SUPT20H-220ENST00000490716 CFAP65Q6ZU64 1925 aaKnown RBP14.37□□□□□ -0.11
SUPT20H-220ENST00000490716 ARID4BQ4LE39 1312 aaPredicted RBP14.37□□□□□ -0.11
SUPT20H-220ENST00000490716 TSPY4P0CV99 314 aa14.37□□□□□ -0.11
SUPT20H-220ENST00000490716 TSPY10P0CW01 314 aa14.37□□□□□ -0.11
SUPT20H-220ENST00000490716 SETD1AO15047 1707 aaKnown RBP14.37□□□□□ -0.11
SUPT20H-220ENST00000490716 IQGAP1P46940 1657 aa14.36□□□□□ -0.11
SUPT20H-220ENST00000490716 ADGRB3O60242 1522 aa14.36□□□□□ -0.11
SUPT20H-220ENST00000490716 NRXN3Q9Y4C0 1643 aa14.34□□□□□ -0.11
SUPT20H-220ENST00000490716 KIF3BO15066 747 aa14.33□□□□□ -0.12
SUPT20H-220ENST00000490716 ALKQ9UM73 1620 aa14.33□□□□□ -0.12
SUPT20H-220ENST00000490716 TRPM2O94759 1503 aa14.33□□□□□ -0.12
SUPT20H-220ENST00000490716 CLTCL1P53675 1640 aa14.32□□□□□ -0.12
SUPT20H-220ENST00000490716 APLP2Q06481 763 aa14.31□□□□□ -0.12
SUPT20H-220ENST00000490716 MLECQ14165 292 aa14.31□□□□□ -0.12
SUPT20H-220ENST00000490716 ZFYVE9O95405 1425 aa14.31□□□□□ -0.12
SUPT20H-220ENST00000490716 TNRQ92752 1358 aa14.3□□□□□ -0.12
SUPT20H-220ENST00000490716 RRP7BPQ9NSQ0 103 aa14.3□□□□□ -0.12
SUPT20H-220ENST00000490716 NWD1Q149M9 1564 aa14.3□□□□□ -0.12
SUPT20H-220ENST00000490716 IQSEC2Q5JU85 1478 aa14.29□□□□□ -0.12
SUPT20H-220ENST00000490716 PPLO60437 1756 aa14.28□□□□□ -0.12
SUPT20H-220ENST00000490716 FBXO31Q5XUX0 539 aaPredicted RBP14.28□□□□□ -0.12
SUPT20H-220ENST00000490716 CHD2O14647 1828 aaKnown RBP14.27□□□□□ -0.12
SUPT20H-220ENST00000490716 GGT6Q6P531 493 aa14.26□□□□□ -0.13
SUPT20H-220ENST00000490716 KIF1BO60333 1816 aa14.25□□□□□ -0.13
SUPT20H-220ENST00000490716 NEXMIFQ5QGS0 1516 aa14.24□□□□□ -0.13
SUPT20H-220ENST00000490716 WASHC2CQ9Y4E1 1318 aa14.24□□□□□ -0.13
SUPT20H-220ENST00000490716 SETBP1Q9Y6X0 1596 aa14.22□□□□□ -0.13
SUPT20H-220ENST00000490716 CHIC2Q9UKJ5 165 aa14.22□□□□□ -0.13
SUPT20H-220ENST00000490716 XRN1Q8IZH2 1706 aaKnown RBP14.2□□□□□ -0.14
SUPT20H-220ENST00000490716 HSPA2P54652 639 aa14.2□□□□□ -0.14
SUPT20H-220ENST00000490716 DIP2AQ14689 1571 aa14.2□□□□□ -0.14
SUPT20H-220ENST00000490716 FAM50AQ14320 339 aaKnown RBP14.19□□□□□ -0.14
SUPT20H-220ENST00000490716 PRAG1Q86YV5 1406 aa14.19□□□□□ -0.14
SUPT20H-220ENST00000490716 PPARGC1BQ86YN6 1023 aaKnown RBP14.18□□□□□ -0.14
SUPT20H-220ENST00000490716 SCAF11Q99590 1463 aaKnown RBP14.18□□□□□ -0.14
SUPT20H-220ENST00000490716 KANK1Q14678 1352 aa14.17□□□□□ -0.14
SUPT20H-220ENST00000490716 TMEM2Q9UHN6 1383 aa14.16□□□□□ -0.14
SUPT20H-220ENST00000490716 CPS1P31327 1500 aa14.16□□□□□ -0.14
SUPT20H-220ENST00000490716 PKD2Q13563 968 aa14.16□□□□□ -0.14
SUPT20H-220ENST00000490716 MYT1LQ9UL68 1186 aa14.15□□□□□ -0.14
SUPT20H-220ENST00000490716 NRXN1Q9ULB1 1477 aa14.14□□□□□ -0.15
SUPT20H-220ENST00000490716 NPHP4O75161 1426 aaPredicted RBP14.13□□□□□ -0.15
SUPT20H-220ENST00000490716 SPATA31E1Q6ZUB1 1445 aa14.13□□□□□ -0.15
SUPT20H-220ENST00000490716 KNDC1Q76NI1 1749 aa14.12□□□□□ -0.15
SUPT20H-220ENST00000490716 ADAMTS13Q76LX8 1427 aa14.12□□□□□ -0.15
SUPT20H-220ENST00000490716 HRCP23327 699 aa14.12□□□□□ -0.15
SUPT20H-220ENST00000490716 IDI1Q13907 227 aa14.12□□□□□ -0.15
SUPT20H-220ENST00000490716 SETD5Q9C0A6 1442 aa14.11□□□□□ -0.15
SUPT20H-220ENST00000490716 NUP155O75694 1391 aa14.11□□□□□ -0.15
SUPT20H-220ENST00000490716 NCKAP5LQ9HCH0 1330 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms