RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 PREX1Q8TCU6 1659 aa15□□□□□ -0.01
SRRM1-217ENST00000490543 KIF14Q15058 1648 aa14.97□□□□□ -0.01
SRRM1-217ENST00000490543 MYT1LQ9UL68 1186 aa14.97□□□□□ -0.01
SRRM1-217ENST00000490543 MYO5CQ9NQX4 1742 aa14.97□□□□□ -0.01
SRRM1-217ENST00000490543 UBTFP17480 764 aaKnown RBP14.96□□□□□ -0.01
SRRM1-217ENST00000490543 CDK11AQ9UQ88 783 aaPredicted RBP14.96□□□□□ -0.01
SRRM1-217ENST00000490543 SETD1BQ9UPS6 1966 aaKnown RBP14.96□□□□□ -0.01
SRRM1-217ENST00000490543 ZNF518AQ6AHZ1 1483 aa14.95□□□□□ -0.02
SRRM1-217ENST00000490543 UHRF1BP1Q6BDS2 1440 aa14.95□□□□□ -0.02
SRRM1-217ENST00000490543 GALR2O43603 387 aaPredicted RBP14.95□□□□□ -0.02
SRRM1-217ENST00000490543 NUBP1P53384 320 aa14.95□□□□□ -0.02
SRRM1-217ENST00000490543 CCDC61Q9Y6R9 512 aa14.95□□□□□ -0.02
SRRM1-217ENST00000490543 SOCS7O14512 581 aa14.94□□□□□ -0.02
SRRM1-217ENST00000490543 ARHGAP35Q9NRY4 1499 aa14.94□□□□□ -0.02
SRRM1-217ENST00000490543 KDM5CP41229 1560 aa14.94□□□□□ -0.02
SRRM1-217ENST00000490543 FMN1Q68DA7 1419 aa14.93□□□□□ -0.02
SRRM1-217ENST00000490543 ARHGAP5Q13017 1502 aa14.93□□□□□ -0.02
SRRM1-217ENST00000490543 DIP2CQ9Y2E4 1556 aa14.93□□□□□ -0.02
SRRM1-217ENST00000490543 TROQ12816 1431 aaPredicted RBP14.92□□□□□ -0.02
SRRM1-217ENST00000490543 PTPRTO14522 1441 aa14.91□□□□□ -0.02
SRRM1-217ENST00000490543 TRAPPC8Q9Y2L5 1435 aa14.91□□□□□ -0.02
SRRM1-217ENST00000490543 MLH3Q9UHC1 1453 aa14.89□□□□□ -0.03
SRRM1-217ENST00000490543 ABCA6Q8N139 1617 aa14.89□□□□□ -0.03
SRRM1-217ENST00000490543 POTEIP0CG38 1075 aa14.89□□□□□ -0.03
SRRM1-217ENST00000490543 C3P01024 1663 aa14.89□□□□□ -0.03
SRRM1-217ENST00000490543 ESF1Q9H501 851 aaKnown RBP14.88□□□□□ -0.03
SRRM1-217ENST00000490543 CDC42BPBQ9Y5S2 1711 aa14.88□□□□□ -0.03
SRRM1-217ENST00000490543 LTBP4Q8N2S1 1624 aa14.88□□□□□ -0.03
SRRM1-217ENST00000490543 REREQ9P2R6 1566 aa14.87□□□□□ -0.03
SRRM1-217ENST00000490543 CLIP1P30622 1438 aa14.87□□□□□ -0.03
SRRM1-217ENST00000490543 LRRIQ1Q96JM4 1722 aa14.86□□□□□ -0.03
SRRM1-217ENST00000490543 KLHL34Q8N239 644 aa14.86□□□□□ -0.03
SRRM1-217ENST00000490543 AGLP35573 1532 aa14.86□□□□□ -0.03
SRRM1-217ENST00000490543 MS4A3Q96HJ5 214 aa14.85□□□□□ -0.03
SRRM1-217ENST00000490543 DCBLD2Q96PD2 775 aa14.85□□□□□ -0.03
SRRM1-217ENST00000490543 NCOA1Q15788 1441 aa14.84□□□□□ -0.03
SRRM1-217ENST00000490543 SPATA31D1Q6ZQQ2 1576 aa14.83□□□□□ -0.04
SRRM1-217ENST00000490543 FAM212AQ96EL1 285 aa14.83□□□□□ -0.04
SRRM1-217ENST00000490543 KIF12Q96FN5 646 aa14.83□□□□□ -0.04
SRRM1-217ENST00000490543 ABCC1P33527 1531 aa14.82□□□□□ -0.04
SRRM1-217ENST00000490543 KIDINS220Q9ULH0 1771 aa14.82□□□□□ -0.04
SRRM1-217ENST00000490543 NCKAP5LQ9HCH0 1330 aa14.81□□□□□ -0.04
SRRM1-217ENST00000490543 PREX2Q70Z35 1606 aa14.81□□□□□ -0.04
SRRM1-217ENST00000490543 ZNF777Q9ULD5 760 aaPredicted RBP14.8□□□□□ -0.04
SRRM1-217ENST00000490543 ZMYM3Q14202 1370 aa14.8□□□□□ -0.04
SRRM1-217ENST00000490543 CNTLNQ9NXG0 1405 aa14.8□□□□□ -0.04
SRRM1-217ENST00000490543 ITSN2Q9NZM3 1697 aa14.8□□□□□ -0.04
SRRM1-217ENST00000490543 IFNLR1Q8IU57 520 aaPredicted RBP14.79□□□□□ -0.04
SRRM1-217ENST00000490543 ZNF335Q9H4Z2 1342 aaPredicted RBP14.79□□□□□ -0.04
SRRM1-217ENST00000490543 CAMSAP1Q5T5Y3 1602 aa14.78□□□□□ -0.04
SRRM1-217ENST00000490543 HNRNPMP52272 730 aaKnown RBP eCLIP14.78□□□□□ -0.04
SRRM1-217ENST00000490543 IQSEC2Q5JU85 1478 aa14.77□□□□□ -0.04
SRRM1-217ENST00000490543 CASKIN1Q8WXD9 1431 aa14.77□□□□□ -0.04
SRRM1-217ENST00000490543 MAP3K13O43283 966 aa14.77□□□□□ -0.05
SRRM1-217ENST00000490543 NPATQ14207 1427 aa14.76□□□□□ -0.05
SRRM1-217ENST00000490543 CDC42BPAQ5VT25 1732 aa14.76□□□□□ -0.05
SRRM1-217ENST00000490543 UBAP1LF5GYI3 381 aa14.76□□□□□ -0.05
SRRM1-217ENST00000490543 SAMD9LQ8IVG5 1584 aa14.76□□□□□ -0.05
SRRM1-217ENST00000490543 SPAG9O60271 1321 aaKnown RBP14.75□□□□□ -0.05
SRRM1-217ENST00000490543 DCAF8Q5TAQ9 597 aa14.75□□□□□ -0.05
SRRM1-217ENST00000490543 CCDC18Q5T9S5 1454 aa14.74□□□□□ -0.05
SRRM1-217ENST00000490543 SUPT6HQ7KZ85 1726 aaKnown RBP14.72□□□□□ -0.05
SRRM1-217ENST00000490543 SYCP2Q9BX26 1530 aa14.72□□□□□ -0.05
SRRM1-217ENST00000490543 GPATCH8Q9UKJ3 1502 aaKnown RBP14.72□□□□□ -0.05
SRRM1-217ENST00000490543 MROH2AA6NES4 1674 aa14.72□□□□□ -0.05
SRRM1-217ENST00000490543 GGT6Q6P531 493 aa14.72□□□□□ -0.05
SRRM1-217ENST00000490543 PTPRKQ15262 1439 aa14.71□□□□□ -0.05
SRRM1-217ENST00000490543 PKD2Q13563 968 aa14.7□□□□□ -0.06
SRRM1-217ENST00000490543 CLTCQ00610 1675 aaKnown RBP14.7□□□□□ -0.06
SRRM1-217ENST00000490543 CFDP1Q9UEE9 299 aaPredicted RBP14.69□□□□□ -0.06
SRRM1-217ENST00000490543 TCOF1Q13428 1488 aaKnown RBP14.69□□□□□ -0.06
SRRM1-217ENST00000490543 ATP7AQ04656 1500 aa14.68□□□□□ -0.06
SRRM1-217ENST00000490543 SPOCK2Q92563 424 aa14.68□□□□□ -0.06
SRRM1-217ENST00000490543 A2MP01023 1474 aa14.68□□□□□ -0.06
SRRM1-217ENST00000490543 PLA2R1Q13018 1463 aa14.68□□□□□ -0.06
SRRM1-217ENST00000490543 MYO3AQ8NEV4 1616 aa14.67□□□□□ -0.06
SRRM1-217ENST00000490543 PLXNC1O60486 1568 aa14.67□□□□□ -0.06
SRRM1-217ENST00000490543 CEP170BQ9Y4F5 1589 aaPredicted RBP14.67□□□□□ -0.06
SRRM1-217ENST00000490543 KIAA1107Q9UPP5 1409 aa14.66□□□□□ -0.06
SRRM1-217ENST00000490543 FYCO1Q9BQS8 1478 aa14.66□□□□□ -0.06
SRRM1-217ENST00000490543 TRPC6Q9Y210 931 aa14.66□□□□□ -0.06
SRRM1-217ENST00000490543 PCDHB13Q9Y5F0 798 aa14.66□□□□□ -0.06
SRRM1-217ENST00000490543 ZNF644Q9H582 1327 aaPredicted RBP14.66□□□□□ -0.06
SRRM1-217ENST00000490543 ZNF142P52746 1687 aaPredicted RBP14.65□□□□□ -0.06
SRRM1-217ENST00000490543 SGIP1Q9BQI5 828 aa14.65□□□□□ -0.06
SRRM1-217ENST00000490543 INO80Q9ULG1 1556 aaPredicted RBP14.64□□□□□ -0.07
SRRM1-217ENST00000490543 PYGBP11216 843 aa14.64□□□□□ -0.07
SRRM1-217ENST00000490543 HSPA1LP34931 641 aa14.64□□□□□ -0.07
SRRM1-217ENST00000490543 GSE1Q14687 1217 aa14.64□□□□□ -0.07
SRRM1-217ENST00000490543 ASTLQ6HA08 431 aaPredicted RBP14.64□□□□□ -0.07
SRRM1-217ENST00000490543 CCNB3Q8WWL7 1395 aa14.63□□□□□ -0.07
SRRM1-217ENST00000490543 ATMINO43313 823 aaPredicted RBP14.63□□□□□ -0.07
SRRM1-217ENST00000490543 PIP4K2BP78356 416 aa14.63□□□□□ -0.07
SRRM1-217ENST00000490543 FBXO31Q5XUX0 539 aaPredicted RBP14.63□□□□□ -0.07
SRRM1-217ENST00000490543 PELP1Q8IZL8 1130 aaKnown RBP14.63□□□□□ -0.07
SRRM1-217ENST00000490543 PLEKHH2Q8IVE3 1493 aa14.62□□□□□ -0.07
SRRM1-217ENST00000490543 A2ML1A8K2U0 1454 aa14.61□□□□□ -0.07
SRRM1-217ENST00000490543 DNMT1P26358 1616 aaKnown RBP14.6□□□□□ -0.07
SRRM1-217ENST00000490543 IFNL1Q8IU54 200 aa14.6□□□□□ -0.07
SRRM1-217ENST00000490543 LHX8Q68G74 356 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms