RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 THSD4Q6ZMP0 1018 aa9.04□□□□□ -0.96
CSTF1-205ENST00000490539 ZNF454Q8N9F8 522 aa9.04□□□□□ -0.96
CSTF1-205ENST00000490539 EMILIN3Q9NT22 766 aa9.04□□□□□ -0.96
CSTF1-205ENST00000490539 A0A0G2JS52 829 aa9.03□□□□□ -0.96
CSTF1-205ENST00000490539 EVI5O60447 810 aa9.03□□□□□ -0.96
CSTF1-205ENST00000490539 BCL2L12Q9HB09 334 aa9.03□□□□□ -0.96
CSTF1-205ENST00000490539 DPYSL4O14531 572 aa9.02□□□□□ -0.97
CSTF1-205ENST00000490539 SPDYE16A6NNV3 312 aaPredicted RBP9.01□□□□□ -0.97
CSTF1-205ENST00000490539 BHMG1C9JSJ3 638 aaPredicted RBP9.01□□□□□ -0.97
CSTF1-205ENST00000490539 MRPL50Q8N5N7 158 aaKnown RBP9.01□□□□□ -0.97
CSTF1-205ENST00000490539 ARHGEF1Q92888 912 aaKnown RBP9.01□□□□□ -0.97
CSTF1-205ENST00000490539 WNT2BQ93097 391 aa9.01□□□□□ -0.97
CSTF1-205ENST00000490539 ARIH1Q9Y4X5 557 aaPredicted RBP9.01□□□□□ -0.97
CSTF1-205ENST00000490539 PTPREP23469 700 aa9□□□□□ -0.97
CSTF1-205ENST00000490539 MYO15BQ96JP2 1530 aa9□□□□□ -0.97
CSTF1-205ENST00000490539 ZCCHC6Q5VYS8 1495 aaKnown RBP8.98□□□□□ -0.97
CSTF1-205ENST00000490539 ZBED2Q9BTP6 218 aa8.98□□□□□ -0.97
CSTF1-205ENST00000490539 ANO8Q9HCE9 1232 aaPredicted RBP8.98□□□□□ -0.97
CSTF1-205ENST00000490539 KDM2AQ9Y2K7 1162 aa8.98□□□□□ -0.97
CSTF1-205ENST00000490539 CC2D2AQ9P2K1 1620 aa8.98□□□□□ -0.97
CSTF1-205ENST00000490539 FOSBP53539 338 aa8.97□□□□□ -0.97
CSTF1-205ENST00000490539 KCNV2Q8TDN2 545 aa8.97□□□□□ -0.97
CSTF1-205ENST00000490539 PDIA6Q15084 440 aa8.96□□□□□ -0.98
CSTF1-205ENST00000490539 NBPF3Q9H094 633 aa8.96□□□□□ -0.98
CSTF1-205ENST00000490539 DCAF1Q9Y4B6 1507 aa8.95□□□□□ -0.98
CSTF1-205ENST00000490539 SLC24A1O60721 1099 aa8.94□□□□□ -0.98
CSTF1-205ENST00000490539 JPH4Q96JJ6 628 aa8.94□□□□□ -0.98
CSTF1-205ENST00000490539 PHF14O94880 888 aa8.91□□□□□ -0.98
CSTF1-205ENST00000490539 FBXW7Q969H0 707 aa8.91□□□□□ -0.98
CSTF1-205ENST00000490539 ZDHHC16Q969W1 377 aa8.91□□□□□ -0.98
CSTF1-205ENST00000490539 EPAS1Q99814 870 aa8.91□□□□□ -0.98
CSTF1-205ENST00000490539 TYW1BQ6NUM6 668 aa8.9□□□□□ -0.98
CSTF1-205ENST00000490539 DDX12PQ92771 950 aa8.89□□□□□ -0.99
CSTF1-205ENST00000490539 ADAM33Q9BZ11 813 aa8.89□□□□□ -0.99
CSTF1-205ENST00000490539 GRXCR2A6NFK2 248 aa8.88□□□□□ -0.99
CSTF1-205ENST00000490539 ITGBL1O95965 494 aaPredicted RBP8.88□□□□□ -0.99
CSTF1-205ENST00000490539 SMYD5Q6GMV2 418 aa8.88□□□□□ -0.99
CSTF1-205ENST00000490539 Q6ZNB5 142 aa8.88□□□□□ -0.99
CSTF1-205ENST00000490539 ANKK1Q8NFD2 765 aa8.88□□□□□ -0.99
CSTF1-205ENST00000490539 NBR1Q14596 966 aa8.87□□□□□ -0.99
CSTF1-205ENST00000490539 PCDHGA10Q9Y5H3 936 aa8.87□□□□□ -0.99
CSTF1-205ENST00000490539 TULP1O00294 542 aaPredicted RBP8.86□□□□□ -0.99
CSTF1-205ENST00000490539 RABGEF1Q9UJ41 708 aa8.85□□□□□ -0.99
CSTF1-205ENST00000490539 BICRAQ9NZM4 1560 aa8.85□□□□□ -0.99
CSTF1-205ENST00000490539 PPP1R3GB7ZBB8 358 aa8.84□□□□□ -0.99
CSTF1-205ENST00000490539 MAP3K7O43318 606 aa8.82□□□□□ -1
CSTF1-205ENST00000490539 NYAP1Q6ZVC0 841 aa8.82□□□□□ -1
CSTF1-205ENST00000490539 RBM33Q96EV2 1170 aaKnown RBP8.82□□□□□ -1
CSTF1-205ENST00000490539 UNC13AQ9UPW8 1703 aa8.82□□□□□ -1
CSTF1-205ENST00000490539 SEMA3EO15041 775 aa8.81□□□□□ -1
CSTF1-205ENST00000490539 BCAMP50895 628 aa8.81□□□□□ -1
CSTF1-205ENST00000490539 SOWAHBA6NEL2 793 aa8.8□□□□□ -1
CSTF1-205ENST00000490539 EN1Q05925 392 aaPredicted RBP8.8□□□□□ -1
CSTF1-205ENST00000490539 PROX2Q3B8N5 592 aa8.8□□□□□ -1
CSTF1-205ENST00000490539 LAPTM4BQ86VI4 370 aa8.8□□□□□ -1
CSTF1-205ENST00000490539 KCNC4Q03721 635 aa8.79□□□□□ -1
CSTF1-205ENST00000490539 C6orf132Q5T0Z8 1188 aa8.79□□□□□ -1
CSTF1-205ENST00000490539 MLLT3P42568 568 aaPredicted RBP8.78□□□□□ -1
CSTF1-205ENST00000490539 TESPA1A2RU30 521 aaPredicted RBP8.77□□□□□ -1.01
CSTF1-205ENST00000490539 COL9A1P20849 921 aa8.77□□□□□ -1.01
CSTF1-205ENST00000490539 OSBPP22059 807 aa8.77□□□□□ -1.01
CSTF1-205ENST00000490539 LAPTM4AQ15012 233 aa8.77□□□□□ -1.01
CSTF1-205ENST00000490539 CERKQ8TCT0 537 aa8.77□□□□□ -1.01
CSTF1-205ENST00000490539 ZFRQ96KR1 1074 aaKnown RBP8.76□□□□□ -1.01
CSTF1-205ENST00000490539 WBP1LQ9NX94 342 aa8.76□□□□□ -1.01
CSTF1-205ENST00000490539 SCRIBQ14160 1630 aa8.76□□□□□ -1.01
CSTF1-205ENST00000490539 KIAA1468Q9P260 1216 aa8.75□□□□□ -1.01
CSTF1-205ENST00000490539 SHROOM4Q9ULL8 1493 aa8.73□□□□□ -1.01
CSTF1-205ENST00000490539 ONECUT3O60422 494 aaPredicted RBP8.73□□□□□ -1.01
CSTF1-205ENST00000490539 NUTM2FA1L443 756 aa8.72□□□□□ -1.01
CSTF1-205ENST00000490539 TSR1Q2NL82 804 aaKnown RBP8.72□□□□□ -1.01
CSTF1-205ENST00000490539 TRAF7Q6Q0C0 670 aa8.7□□□□□ -1.02
CSTF1-205ENST00000490539 SEPT9Q9UHD8 586 aaPredicted RBP8.7□□□□□ -1.02
CSTF1-205ENST00000490539 EIF4G1Q04637 1599 aaKnown RBP8.69□□□□□ -1.02
CSTF1-205ENST00000490539 GFRA3O60609 400 aa8.69□□□□□ -1.02
CSTF1-205ENST00000490539 FAM98CQ17RN3 349 aaKnown RBP8.69□□□□□ -1.02
CSTF1-205ENST00000490539 PACS2Q86VP3 889 aa8.69□□□□□ -1.02
CSTF1-205ENST00000490539 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.69□□□□□ -1.02
CSTF1-205ENST00000490539 TSR3Q9UJK0 312 aaKnown RBP8.69□□□□□ -1.02
CSTF1-205ENST00000490539 BCANQ96GW7 911 aa8.68□□□□□ -1.02
CSTF1-205ENST00000490539 LRCH3Q96II8 777 aa8.68□□□□□ -1.02
CSTF1-205ENST00000490539 HPS5Q9UPZ3 1129 aa8.68□□□□□ -1.02
CSTF1-205ENST00000490539 FCHSD2O94868 740 aa8.67□□□□□ -1.02
CSTF1-205ENST00000490539 PRSS12P56730 875 aa8.67□□□□□ -1.02
CSTF1-205ENST00000490539 ERCC6Q03468 1493 aa8.67□□□□□ -1.02
CSTF1-205ENST00000490539 TRIM6-TRIM34B2RNG4 842 aa8.66□□□□□ -1.02
CSTF1-205ENST00000490539 PRIM1P49642 420 aaKnown RBP8.66□□□□□ -1.02
CSTF1-205ENST00000490539 RBM26Q5T8P6 1007 aaKnown RBP8.66□□□□□ -1.02
CSTF1-205ENST00000490539 CDCA7LQ96GN5 454 aa8.66□□□□□ -1.02
CSTF1-205ENST00000490539 RBM27Q9P2N5 1060 aaKnown RBP8.66□□□□□ -1.02
CSTF1-205ENST00000490539 LCE2BO14633 110 aa8.65□□□□□ -1.02
CSTF1-205ENST00000490539 GPIHBP1Q8IV16 184 aa8.65□□□□□ -1.02
CSTF1-205ENST00000490539 CDHR5Q9HBB8 845 aa8.65□□□□□ -1.02
CSTF1-205ENST00000490539 PTGDRQ13258 359 aa8.64□□□□□ -1.03
CSTF1-205ENST00000490539 NBPF26B4DH59 902 aa8.62□□□□□ -1.03
CSTF1-205ENST00000490539 NRG2O14511 850 aaPredicted RBP8.62□□□□□ -1.03
CSTF1-205ENST00000490539 HIC1Q14526 733 aa8.62□□□□□ -1.03
CSTF1-205ENST00000490539 PPP4CP60510 307 aa8.61□□□□□ -1.03
CSTF1-205ENST00000490539 PRKD2Q9BZL6 878 aa8.61□□□□□ -1.03
CSTF1-205ENST00000490539 NPDC1Q9NQX5 325 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms