RNA–Protein interactions for RNA: ENST00000490435.5

ITGA4-211, Transcript of integrin subunit alpha 4, humanhuman

TSL 5

Gene ITGA4, Length 720 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-211ENST00000490435 COL9A1P20849 921 aa13.38□□□□□ -0.27
ITGA4-211ENST00000490435 EPAS1Q99814 870 aa13.38□□□□□ -0.27
ITGA4-211ENST00000490435 PROX2Q3B8N5 592 aa13.36□□□□□ -0.27
ITGA4-211ENST00000490435 SPRYD3Q8NCJ5 442 aa13.33□□□□□ -0.28
ITGA4-211ENST00000490435 C6orf132Q5T0Z8 1188 aa13.32□□□□□ -0.28
ITGA4-211ENST00000490435 IFFO2Q5TF58 517 aa13.32□□□□□ -0.28
ITGA4-211ENST00000490435 ANKK1Q8NFD2 765 aa13.32□□□□□ -0.28
ITGA4-211ENST00000490435 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.32□□□□□ -0.28
ITGA4-211ENST00000490435 LAPTM4BQ86VI4 370 aa13.3□□□□□ -0.28
ITGA4-211ENST00000490435 ONECUT3O60422 494 aaPredicted RBP13.29□□□□□ -0.28
ITGA4-211ENST00000490435 KIAA1468Q9P260 1216 aa13.29□□□□□ -0.28
ITGA4-211ENST00000490435 DDX12PQ92771 950 aa13.28□□□□□ -0.28
ITGA4-211ENST00000490435 AMER1Q5JTC6 1135 aaPredicted RBP13.27□□□□□ -0.29
ITGA4-211ENST00000490435 RBM33Q96EV2 1170 aaKnown RBP13.27□□□□□ -0.29
ITGA4-211ENST00000490435 PDIA6Q15084 440 aa13.24□□□□□ -0.29
ITGA4-211ENST00000490435 SPDYE16A6NNV3 312 aaPredicted RBP13.23□□□□□ -0.29
ITGA4-211ENST00000490435 TRIM6-TRIM34B2RNG4 842 aa13.23□□□□□ -0.29
ITGA4-211ENST00000490435 ZFRQ96KR1 1074 aaKnown RBP13.23□□□□□ -0.29
ITGA4-211ENST00000490435 SOWAHBA6NEL2 793 aa13.22□□□□□ -0.29
ITGA4-211ENST00000490435 RGS20O76081 388 aa13.22□□□□□ -0.29
ITGA4-211ENST00000490435 BCAMP50895 628 aa13.22□□□□□ -0.29
ITGA4-211ENST00000490435 NBR1Q14596 966 aa13.21□□□□□ -0.29
ITGA4-211ENST00000490435 EN1Q05925 392 aaPredicted RBP13.2□□□□□ -0.3
ITGA4-211ENST00000490435 SEPT9Q9UHD8 586 aaPredicted RBP13.2□□□□□ -0.3
ITGA4-211ENST00000490435 A0A0G2JS52 829 aa13.19□□□□□ -0.3
ITGA4-211ENST00000490435 MAP3K7O43318 606 aa13.19□□□□□ -0.3
ITGA4-211ENST00000490435 E2F4Q16254 413 aa13.19□□□□□ -0.3
ITGA4-211ENST00000490435 NYAP1Q6ZVC0 841 aa13.19□□□□□ -0.3
ITGA4-211ENST00000490435 FAM98CQ17RN3 349 aaKnown RBP13.18□□□□□ -0.3
ITGA4-211ENST00000490435 WDR70Q9NW82 654 aa13.18□□□□□ -0.3
ITGA4-211ENST00000490435 PAXIP1Q6ZW49 1069 aaPredicted RBP13.17□□□□□ -0.3
ITGA4-211ENST00000490435 CFAP44Q96MT7 982 aa13.17□□□□□ -0.3
ITGA4-211ENST00000490435 ITGBL1O95965 494 aaPredicted RBP13.15□□□□□ -0.3
ITGA4-211ENST00000490435 PACS2Q86VP3 889 aa13.15□□□□□ -0.3
ITGA4-211ENST00000490435 TSR1Q2NL82 804 aaKnown RBP13.14□□□□□ -0.31
ITGA4-211ENST00000490435 RTN4Q9NQC3 1192 aaKnown RBP13.14□□□□□ -0.31
ITGA4-211ENST00000490435 WBP1LQ9NX94 342 aa13.13□□□□□ -0.31
ITGA4-211ENST00000490435 ARIH1Q9Y4X5 557 aaPredicted RBP13.13□□□□□ -0.31
ITGA4-211ENST00000490435 LRCH3Q96II8 777 aa13.12□□□□□ -0.31
ITGA4-211ENST00000490435 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.12□□□□□ -0.31
ITGA4-211ENST00000490435 TSKSQ9UJT2 592 aa13.11□□□□□ -0.31
ITGA4-211ENST00000490435 TSR3Q9UJK0 312 aaKnown RBP13.09□□□□□ -0.31
ITGA4-211ENST00000490435 GRXCR2A6NFK2 248 aa13.08□□□□□ -0.32
ITGA4-211ENST00000490435 CERKQ8TCT0 537 aa13.08□□□□□ -0.32
ITGA4-211ENST00000490435 HPS5Q9UPZ3 1129 aa13.08□□□□□ -0.32
ITGA4-211ENST00000490435 CDCA7LQ96GN5 454 aa13.07□□□□□ -0.32
ITGA4-211ENST00000490435 PRSS12P56730 875 aa13.06□□□□□ -0.32
ITGA4-211ENST00000490435 KCNC4Q03721 635 aa13.05□□□□□ -0.32
ITGA4-211ENST00000490435 IRX2Q9BZI1 471 aaPredicted RBP13.03□□□□□ -0.32
ITGA4-211ENST00000490435 PRIM1P49642 420 aaKnown RBP13.02□□□□□ -0.33
ITGA4-211ENST00000490435 NBPF26B4DH59 902 aa13□□□□□ -0.33
ITGA4-211ENST00000490435 OSBPP22059 807 aa13□□□□□ -0.33
ITGA4-211ENST00000490435 PPP4CP60510 307 aa13□□□□□ -0.33
ITGA4-211ENST00000490435 SMAPO00193 183 aa12.99□□□□□ -0.33
ITGA4-211ENST00000490435 FAM198AQ9UFP1 575 aa12.99□□□□□ -0.33
ITGA4-211ENST00000490435 TATDN2Q93075 761 aa12.98□□□□□ -0.33
ITGA4-211ENST00000490435 SAMD7Q7Z3H4 446 aa12.97□□□□□ -0.33
ITGA4-211ENST00000490435 PNMA3Q9UL41 463 aa12.96□□□□□ -0.33
ITGA4-211ENST00000490435 CDHR5Q9HBB8 845 aa12.95□□□□□ -0.34
ITGA4-211ENST00000490435 RBM27Q9P2N5 1060 aaKnown RBP12.95□□□□□ -0.34
ITGA4-211ENST00000490435 HDGFP51858 240 aaKnown RBP12.93□□□□□ -0.34
ITGA4-211ENST00000490435 C3orf80F5H4A9 247 aa12.92□□□□□ -0.34
ITGA4-211ENST00000490435 NUDT18Q6ZVK8 323 aa12.91□□□□□ -0.34
ITGA4-211ENST00000490435 RNF40O75150 1001 aa12.87□□□□□ -0.35
ITGA4-211ENST00000490435 TJAP1Q5JTD0 557 aa12.87□□□□□ -0.35
ITGA4-211ENST00000490435 NPDC1Q9NQX5 325 aaPredicted RBP12.86□□□□□ -0.35
ITGA4-211ENST00000490435 PADI6Q6TGC4 694 aa12.85□□□□□ -0.35
ITGA4-211ENST00000490435 TTC13Q8NBP0 860 aa12.85□□□□□ -0.35
ITGA4-211ENST00000490435 ARHGEF1Q92888 912 aaKnown RBP12.85□□□□□ -0.35
ITGA4-211ENST00000490435 NECTIN2Q92692 538 aa12.84□□□□□ -0.35
ITGA4-211ENST00000490435 MTRQ99707 1265 aa12.84□□□□□ -0.35
ITGA4-211ENST00000490435 IL21Q9HBE4 155 aa12.84□□□□□ -0.35
ITGA4-211ENST00000490435 TSHZ2Q9NRE2 1034 aa12.83□□□□□ -0.36
ITGA4-211ENST00000490435 SLF2Q8IX21 1173 aa12.8□□□□□ -0.36
ITGA4-211ENST00000490435 SLC4A3P48751 1232 aa12.79□□□□□ -0.36
ITGA4-211ENST00000490435 APLP1P51693 650 aa12.79□□□□□ -0.36
ITGA4-211ENST00000490435 SWT1Q5T5J6 900 aaKnown RBP12.79□□□□□ -0.36
ITGA4-211ENST00000490435 KCNV2Q8TDN2 545 aa12.78□□□□□ -0.36
ITGA4-211ENST00000490435 MLLT3P42568 568 aaPredicted RBP12.77□□□□□ -0.37
ITGA4-211ENST00000490435 Q6ZNB5 142 aa12.76□□□□□ -0.37
ITGA4-211ENST00000490435 ZNF516Q92618 1163 aa12.75□□□□□ -0.37
ITGA4-211ENST00000490435 EYA1Q99502 592 aa12.75□□□□□ -0.37
ITGA4-211ENST00000490435 LAPTM4AQ15012 233 aa12.74□□□□□ -0.37
ITGA4-211ENST00000490435 PPP1R18Q6NYC8 613 aa12.74□□□□□ -0.37
ITGA4-211ENST00000490435 PTGDRQ13258 359 aa12.71□□□□□ -0.37
ITGA4-211ENST00000490435 PRKD2Q9BZL6 878 aa12.71□□□□□ -0.37
ITGA4-211ENST00000490435 PRR14Q9BWN1 585 aa12.7□□□□□ -0.38
ITGA4-211ENST00000490435 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.7□□□□□ -0.38
ITGA4-211ENST00000490435 COPS2P61201 443 aa12.68□□□□□ -0.38
ITGA4-211ENST00000490435 P3H3Q8IVL6 736 aa12.68□□□□□ -0.38
ITGA4-211ENST00000490435 V9GY48 417 aaPredicted RBP12.68□□□□□ -0.38
ITGA4-211ENST00000490435 GFRA3O60609 400 aa12.67□□□□□ -0.38
ITGA4-211ENST00000490435 NKX2-3Q8TAU0 364 aa12.67□□□□□ -0.38
ITGA4-211ENST00000490435 RBM46Q8TBY0 533 aaKnown RBP12.67□□□□□ -0.38
ITGA4-211ENST00000490435 NUTM2FA1L443 756 aa12.66□□□□□ -0.38
ITGA4-211ENST00000490435 DNAJB2P25686 324 aa12.66□□□□□ -0.38
ITGA4-211ENST00000490435 GGCXP38435 758 aa12.66□□□□□ -0.38
ITGA4-211ENST00000490435 ADGRG1Q9Y653 693 aa12.64□□□□□ -0.39
ITGA4-211ENST00000490435 ZPR1O75312 459 aa12.63□□□□□ -0.39
ITGA4-211ENST00000490435 PCDHB3Q9Y5E6 796 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms