RNA–Protein interactions for RNA: ENST00000490222.1

LRRC1-204, Transcript of leucine rich repeat containing 1, humanhuman

TSL 3

Gene LRRC1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-204ENST00000490222 MMRN1Q13201 1228 aa13.18□□□□□ -0.3
LRRC1-204ENST00000490222 NBR1Q14596 966 aa13.18□□□□□ -0.3
LRRC1-204ENST00000490222 ADGRD1Q6QNK2 874 aa13.16□□□□□ -0.3
LRRC1-204ENST00000490222 GRXCR2A6NFK2 248 aa13.15□□□□□ -0.3
LRRC1-204ENST00000490222 RBM33Q96EV2 1170 aaKnown RBP13.15□□□□□ -0.3
LRRC1-204ENST00000490222 SLC4A5Q9BY07 1137 aa13.15□□□□□ -0.3
LRRC1-204ENST00000490222 EN1Q05925 392 aaPredicted RBP13.14□□□□□ -0.31
LRRC1-204ENST00000490222 PPP1R3GB7ZBB8 358 aa13.13□□□□□ -0.31
LRRC1-204ENST00000490222 C6orf132Q5T0Z8 1188 aa13.13□□□□□ -0.31
LRRC1-204ENST00000490222 ZBED2Q9BTP6 218 aa13.12□□□□□ -0.31
LRRC1-204ENST00000490222 VPS9D1Q9Y2B5 631 aa13.12□□□□□ -0.31
LRRC1-204ENST00000490222 COL9A1P20849 921 aa13.11□□□□□ -0.31
LRRC1-204ENST00000490222 OSBPP22059 807 aa13.11□□□□□ -0.31
LRRC1-204ENST00000490222 PRIM1P49642 420 aaKnown RBP13.11□□□□□ -0.31
LRRC1-204ENST00000490222 MAP3K7O43318 606 aa13.1□□□□□ -0.31
LRRC1-204ENST00000490222 MYT1LQ9UL68 1186 aa13.1□□□□□ -0.31
LRRC1-204ENST00000490222 HRO43593 1189 aa13.09□□□□□ -0.31
LRRC1-204ENST00000490222 MLLT3P42568 568 aaPredicted RBP13.08□□□□□ -0.32
LRRC1-204ENST00000490222 TSR1Q2NL82 804 aaKnown RBP13.07□□□□□ -0.32
LRRC1-204ENST00000490222 SEMA3EO15041 775 aa13.05□□□□□ -0.32
LRRC1-204ENST00000490222 RNF166Q96A37 237 aaPredicted RBP13.04□□□□□ -0.32
LRRC1-204ENST00000490222 PROX2Q3B8N5 592 aa13.02□□□□□ -0.33
LRRC1-204ENST00000490222 BHMG1C9JSJ3 638 aaPredicted RBP13□□□□□ -0.33
LRRC1-204ENST00000490222 TESPA1A2RU30 521 aaPredicted RBP12.99□□□□□ -0.33
LRRC1-204ENST00000490222 STAC3Q96MF2 364 aa12.99□□□□□ -0.33
LRRC1-204ENST00000490222 CDHR5Q9HBB8 845 aa12.99□□□□□ -0.33
LRRC1-204ENST00000490222 ONECUT3O60422 494 aaPredicted RBP12.98□□□□□ -0.33
LRRC1-204ENST00000490222 CERKQ8TCT0 537 aa12.98□□□□□ -0.33
LRRC1-204ENST00000490222 RABGEF1Q9UJ41 708 aa12.98□□□□□ -0.33
LRRC1-204ENST00000490222 TRIM6-TRIM34B2RNG4 842 aa12.96□□□□□ -0.33
LRRC1-204ENST00000490222 NBPF3Q9H094 633 aa12.96□□□□□ -0.33
LRRC1-204ENST00000490222 KIAA1468Q9P260 1216 aa12.95□□□□□ -0.34
LRRC1-204ENST00000490222 PRSS12P56730 875 aa12.93□□□□□ -0.34
LRRC1-204ENST00000490222 MRPL50Q8N5N7 158 aaKnown RBP12.93□□□□□ -0.34
LRRC1-204ENST00000490222 NPDC1Q9NQX5 325 aaPredicted RBP12.93□□□□□ -0.34
LRRC1-204ENST00000490222 SMYD5Q6GMV2 418 aa12.92□□□□□ -0.34
LRRC1-204ENST00000490222 CDCA7LQ96GN5 454 aa12.92□□□□□ -0.34
LRRC1-204ENST00000490222 TSKSQ9UJT2 592 aa12.91□□□□□ -0.34
LRRC1-204ENST00000490222 RBM27Q9P2N5 1060 aaKnown RBP12.9□□□□□ -0.34
LRRC1-204ENST00000490222 PACS2Q86VP3 889 aa12.89□□□□□ -0.35
LRRC1-204ENST00000490222 LAPTM4BQ86VI4 370 aa12.88□□□□□ -0.35
LRRC1-204ENST00000490222 FAM198AQ9UFP1 575 aa12.88□□□□□ -0.35
LRRC1-204ENST00000490222 NUTM2FA1L443 756 aa12.87□□□□□ -0.35
LRRC1-204ENST00000490222 PTGDRQ13258 359 aa12.87□□□□□ -0.35
LRRC1-204ENST00000490222 KCTD12Q96CX2 325 aaKnown RBP12.87□□□□□ -0.35
LRRC1-204ENST00000490222 GOLGA8CPA6NN73 597 aa12.86□□□□□ -0.35
LRRC1-204ENST00000490222 TTC13Q8NBP0 860 aa12.85□□□□□ -0.35
LRRC1-204ENST00000490222 SEPT9Q9UHD8 586 aaPredicted RBP12.85□□□□□ -0.35
LRRC1-204ENST00000490222 RBM26Q5T8P6 1007 aaKnown RBP12.84□□□□□ -0.35
LRRC1-204ENST00000490222 FAM98CQ17RN3 349 aaKnown RBP12.83□□□□□ -0.36
LRRC1-204ENST00000490222 PADI6Q6TGC4 694 aa12.83□□□□□ -0.36
LRRC1-204ENST00000490222 WNT2BQ93097 391 aa12.83□□□□□ -0.36
LRRC1-204ENST00000490222 NBPF26B4DH59 902 aa12.81□□□□□ -0.36
LRRC1-204ENST00000490222 FCHSD2O94868 740 aa12.81□□□□□ -0.36
LRRC1-204ENST00000490222 HCSTQ9UBK5 93 aa12.81□□□□□ -0.36
LRRC1-204ENST00000490222 C3orf80F5H4A9 247 aa12.8□□□□□ -0.36
LRRC1-204ENST00000490222 THSD4Q6ZMP0 1018 aa12.8□□□□□ -0.36
LRRC1-204ENST00000490222 ZFRQ96KR1 1074 aaKnown RBP12.8□□□□□ -0.36
LRRC1-204ENST00000490222 ANKK1Q8NFD2 765 aa12.79□□□□□ -0.36
LRRC1-204ENST00000490222 TATDN2Q93075 761 aa12.79□□□□□ -0.36
LRRC1-204ENST00000490222 SMAPO00193 183 aa12.77□□□□□ -0.37
LRRC1-204ENST00000490222 PNMA3Q9UL41 463 aa12.77□□□□□ -0.37
LRRC1-204ENST00000490222 TULP1O00294 542 aaPredicted RBP12.76□□□□□ -0.37
LRRC1-204ENST00000490222 NUDT18Q6ZVK8 323 aa12.76□□□□□ -0.37
LRRC1-204ENST00000490222 GPR37O15354 613 aa12.74□□□□□ -0.37
LRRC1-204ENST00000490222 SLC24A1O60721 1099 aa12.74□□□□□ -0.37
LRRC1-204ENST00000490222 HIC1Q14526 733 aa12.74□□□□□ -0.37
LRRC1-204ENST00000490222 SOWAHBA6NEL2 793 aa12.73□□□□□ -0.37
LRRC1-204ENST00000490222 BCAMP50895 628 aa12.72□□□□□ -0.37
LRRC1-204ENST00000490222 PTPN5P54829 565 aa12.72□□□□□ -0.37
LRRC1-204ENST00000490222 GPIHBP1Q8IV16 184 aa12.71□□□□□ -0.37
LRRC1-204ENST00000490222 EYA1Q99502 592 aa12.71□□□□□ -0.37
LRRC1-204ENST00000490222 LRCH3Q96II8 777 aa12.7□□□□□ -0.38
LRRC1-204ENST00000490222 ADGRG1Q9Y653 693 aa12.7□□□□□ -0.38
LRRC1-204ENST00000490222 GNPATO15228 680 aa12.69□□□□□ -0.38
LRRC1-204ENST00000490222 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.69□□□□□ -0.38
LRRC1-204ENST00000490222 SAMD7Q7Z3H4 446 aa12.67□□□□□ -0.38
LRRC1-204ENST00000490222 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.66□□□□□ -0.38
LRRC1-204ENST00000490222 FECHP22830 423 aa12.65□□□□□ -0.38
LRRC1-204ENST00000490222 FAM161AQ3B820 660 aa12.65□□□□□ -0.38
LRRC1-204ENST00000490222 RBM46Q8TBY0 533 aaKnown RBP12.65□□□□□ -0.38
LRRC1-204ENST00000490222 TSR3Q9UJK0 312 aaKnown RBP12.64□□□□□ -0.39
LRRC1-204ENST00000490222 HPS5Q9UPZ3 1129 aa12.63□□□□□ -0.39
LRRC1-204ENST00000490222 HDGFP51858 240 aaKnown RBP12.62□□□□□ -0.39
LRRC1-204ENST00000490222 WBP1LQ9NX94 342 aa12.62□□□□□ -0.39
LRRC1-204ENST00000490222 OATP04181 439 aa12.61□□□□□ -0.39
LRRC1-204ENST00000490222 NYAP1Q6ZVC0 841 aa12.61□□□□□ -0.39
LRRC1-204ENST00000490222 DNAJB2P25686 324 aa12.6□□□□□ -0.39
LRRC1-204ENST00000490222 SWT1Q5T5J6 900 aaKnown RBP12.6□□□□□ -0.39
LRRC1-204ENST00000490222 LMOD2Q6P5Q4 547 aa12.6□□□□□ -0.39
LRRC1-204ENST00000490222 PXYLP1Q8TE99 480 aa12.59□□□□□ -0.39
LRRC1-204ENST00000490222 RCCD1A6NED2 376 aa12.58□□□□□ -0.4
LRRC1-204ENST00000490222 METTL3Q86U44 580 aaKnown RBP12.58□□□□□ -0.4
LRRC1-204ENST00000490222 PPP4CP60510 307 aa12.57□□□□□ -0.4
LRRC1-204ENST00000490222 TMEM134Q9H6X4 195 aa12.57□□□□□ -0.4
LRRC1-204ENST00000490222 PLA2G2EQ9NZK7 142 aa12.57□□□□□ -0.4
LRRC1-204ENST00000490222 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.56□□□□□ -0.4
LRRC1-204ENST00000490222 SLF2Q8IX21 1173 aa12.56□□□□□ -0.4
LRRC1-204ENST00000490222 RNF40O75150 1001 aa12.54□□□□□ -0.4
LRRC1-204ENST00000490222 SLC4A3P48751 1232 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms