RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 TPM1P09493 284 aa10.94□□□□□ -0.66
LSAMP-205ENST00000490035 TULP1O00294 542 aaPredicted RBP10.94□□□□□ -0.66
LSAMP-205ENST00000490035 CEP89Q96ST8 783 aa10.94□□□□□ -0.66
LSAMP-205ENST00000490035 PLEKHG5O94827 1062 aa10.94□□□□□ -0.66
LSAMP-205ENST00000490035 ZBED9Q6R2W3 1325 aa10.93□□□□□ -0.66
LSAMP-205ENST00000490035 TRIM6-TRIM34B2RNG4 842 aa10.93□□□□□ -0.66
LSAMP-205ENST00000490035 HOOK1Q9UJC3 728 aaKnown RBP10.93□□□□□ -0.66
LSAMP-205ENST00000490035 GGT6Q6P531 493 aa10.93□□□□□ -0.66
LSAMP-205ENST00000490035 RUFY2Q8WXA3 655 aa10.93□□□□□ -0.66
LSAMP-205ENST00000490035 CADPSQ9ULU8 1353 aa10.92□□□□□ -0.66
LSAMP-205ENST00000490035 EVC2Q86UK5 1308 aa10.92□□□□□ -0.66
LSAMP-205ENST00000490035 CLSTN1O94985 981 aa10.92□□□□□ -0.66
LSAMP-205ENST00000490035 CPLX2Q6PUV4 134 aaKnown RBP10.92□□□□□ -0.66
LSAMP-205ENST00000490035 HSP90B1P14625 803 aaKnown RBP10.92□□□□□ -0.66
LSAMP-205ENST00000490035 REC8O95072 547 aa10.91□□□□□ -0.66
LSAMP-205ENST00000490035 SCAPERQ9BY12 1400 aa10.91□□□□□ -0.66
LSAMP-205ENST00000490035 RSPH6AQ9H0K4 717 aa10.91□□□□□ -0.66
LSAMP-205ENST00000490035 VGFO15240 615 aaPredicted RBP10.91□□□□□ -0.66
LSAMP-205ENST00000490035 SETQ01105 290 aaPredicted RBP10.91□□□□□ -0.66
LSAMP-205ENST00000490035 KIF21BO75037 1637 aa10.91□□□□□ -0.66
LSAMP-205ENST00000490035 FAM161AQ3B820 660 aa10.9□□□□□ -0.66
LSAMP-205ENST00000490035 GOLGA6L19H0YKK7 550 aa10.9□□□□□ -0.66
LSAMP-205ENST00000490035 CSB-PGBD3P0DP91 1061 aa10.9□□□□□ -0.66
LSAMP-205ENST00000490035 TNNT3P45378 269 aaPredicted RBP10.9□□□□□ -0.66
LSAMP-205ENST00000490035 MIA2Q96PC5 1412 aa10.9□□□□□ -0.66
LSAMP-205ENST00000490035 PAK3O75914 559 aaPredicted RBP10.89□□□□□ -0.67
LSAMP-205ENST00000490035 WASHC2CQ9Y4E1 1318 aa10.89□□□□□ -0.67
LSAMP-205ENST00000490035 ISY1Q9ULR0 285 aaKnown RBP10.89□□□□□ -0.67
LSAMP-205ENST00000490035 SF3A1Q15459 793 aaKnown RBP10.89□□□□□ -0.67
LSAMP-205ENST00000490035 STK26Q9P289 416 aa10.89□□□□□ -0.67
LSAMP-205ENST00000490035 A0A0U1RQG5 324 aaPredicted RBP10.88□□□□□ -0.67
LSAMP-205ENST00000490035 AMPHP49418 695 aa10.88□□□□□ -0.67
LSAMP-205ENST00000490035 MYOM3Q5VTT5 1437 aa10.88□□□□□ -0.67
LSAMP-205ENST00000490035 AMOTL1Q8IY63 956 aa10.88□□□□□ -0.67
LSAMP-205ENST00000490035 ANKRD20A12PQ8NF67 263 aa10.88□□□□□ -0.67
LSAMP-205ENST00000490035 DDX19BQ9UMR2 479 aa10.88□□□□□ -0.67
LSAMP-205ENST00000490035 RASSF8Q8NHQ8 419 aa10.87□□□□□ -0.67
LSAMP-205ENST00000490035 CCDC47Q96A33 483 aaKnown RBP10.87□□□□□ -0.67
LSAMP-205ENST00000490035 H3BQV1 296 aa10.87□□□□□ -0.67
LSAMP-205ENST00000490035 IFFO2Q5TF58 517 aa10.87□□□□□ -0.67
LSAMP-205ENST00000490035 ZKSCAN2Q63HK3 967 aa10.87□□□□□ -0.67
LSAMP-205ENST00000490035 AKAP17AQ02040 695 aaKnown RBP10.87□□□□□ -0.67
LSAMP-205ENST00000490035 MFAP1P55081 439 aaKnown RBP10.87□□□□□ -0.67
LSAMP-205ENST00000490035 KIF3BO15066 747 aa10.86□□□□□ -0.67
LSAMP-205ENST00000490035 SYNE3Q6ZMZ3 975 aa10.86□□□□□ -0.67
LSAMP-205ENST00000490035 NEXNQ0ZGT2 675 aa10.86□□□□□ -0.67
LSAMP-205ENST00000490035 RNF20Q5VTR2 975 aa10.86□□□□□ -0.67
LSAMP-205ENST00000490035 NGDNQ8NEJ9 315 aaKnown RBP10.86□□□□□ -0.67
LSAMP-205ENST00000490035 FAM184AQ8NB25 1140 aa10.86□□□□□ -0.67
LSAMP-205ENST00000490035 L3MBTL2Q969R5 705 aa10.86□□□□□ -0.67
LSAMP-205ENST00000490035 G3V3G9 751 aa10.85□□□□□ -0.67
LSAMP-205ENST00000490035 DCAF8Q5TAQ9 597 aa10.85□□□□□ -0.67
LSAMP-205ENST00000490035 ZKSCAN1P17029 563 aaPredicted RBP10.85□□□□□ -0.67
LSAMP-205ENST00000490035 TPD52L1Q16890 204 aaPredicted RBP10.85□□□□□ -0.67
LSAMP-205ENST00000490035 DHX8Q14562 1220 aaKnown RBP10.85□□□□□ -0.67
LSAMP-205ENST00000490035 HSP90AB4PQ58FF6 505 aa10.85□□□□□ -0.67
LSAMP-205ENST00000490035 SENP3Q9H4L4 574 aaPredicted RBP10.85□□□□□ -0.67
LSAMP-205ENST00000490035 ERICH3Q5RHP9 1530 aa10.84□□□□□ -0.67
LSAMP-205ENST00000490035 IPO7O95373 1038 aaKnown RBP10.84□□□□□ -0.67
LSAMP-205ENST00000490035 C1orf141Q5JVX7 400 aa10.84□□□□□ -0.67
LSAMP-205ENST00000490035 TAOK2Q9UL54 1235 aa10.84□□□□□ -0.67
LSAMP-205ENST00000490035 CHMP3Q9Y3E7 222 aa10.84□□□□□ -0.67
LSAMP-205ENST00000490035 SLKQ9H2G2 1235 aaPredicted RBP10.84□□□□□ -0.67
LSAMP-205ENST00000490035 DDX58O95786 925 aaKnown RBP10.84□□□□□ -0.67
LSAMP-205ENST00000490035 COG3Q96JB2 828 aa10.84□□□□□ -0.67
LSAMP-205ENST00000490035 SPRYD3Q8NCJ5 442 aa10.84□□□□□ -0.67
LSAMP-205ENST00000490035 KANK4Q5T7N3 995 aaPredicted RBP10.83□□□□□ -0.68
LSAMP-205ENST00000490035 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.83□□□□□ -0.68
LSAMP-205ENST00000490035 USP47Q96K76 1375 aa10.83□□□□□ -0.68
LSAMP-205ENST00000490035 MTERF4Q7Z6M4 381 aaKnown RBP10.83□□□□□ -0.68
LSAMP-205ENST00000490035 API5Q9BZZ5 524 aaKnown RBP10.83□□□□□ -0.68
LSAMP-205ENST00000490035 SAFB2Q14151 953 aaKnown RBP eCLIP10.83□□□□□ -0.68
LSAMP-205ENST00000490035 RTN4Q9NQC3 1192 aaKnown RBP10.83□□□□□ -0.68
LSAMP-205ENST00000490035 NUCB2P80303 420 aa10.83□□□□□ -0.68
LSAMP-205ENST00000490035 BECN2A8MW95 431 aa10.83□□□□□ -0.68
LSAMP-205ENST00000490035 NOL10Q9BSC4 688 aaKnown RBP10.83□□□□□ -0.68
LSAMP-205ENST00000490035 TRIM29Q14134 588 aa10.83□□□□□ -0.68
LSAMP-205ENST00000490035 RRBP1Q9P2E9 1410 aaKnown RBP10.82□□□□□ -0.68
LSAMP-205ENST00000490035 SOX12O15370 315 aa10.82□□□□□ -0.68
LSAMP-205ENST00000490035 ATAD2BQ9ULI0 1458 aa10.82□□□□□ -0.68
LSAMP-205ENST00000490035 FANCIQ9NVI1 1328 aa10.82□□□□□ -0.68
LSAMP-205ENST00000490035 MLECQ14165 292 aa10.82□□□□□ -0.68
LSAMP-205ENST00000490035 TRHP20396 242 aaPredicted RBP10.82□□□□□ -0.68
LSAMP-205ENST00000490035 FHOD3Q2V2M9 1422 aa10.82□□□□□ -0.68
LSAMP-205ENST00000490035 SUPT6HQ7KZ85 1726 aaKnown RBP10.82□□□□□ -0.68
LSAMP-205ENST00000490035 APBB1O00213 710 aa10.82□□□□□ -0.68
LSAMP-205ENST00000490035 FANCD2Q9BXW9 1451 aa10.82□□□□□ -0.68
LSAMP-205ENST00000490035 TEX35Q5T0J7 233 aa10.81□□□□□ -0.68
LSAMP-205ENST00000490035 EFCAB5A4FU69 1503 aa10.81□□□□□ -0.68
LSAMP-205ENST00000490035 FYCO1Q9BQS8 1478 aa10.81□□□□□ -0.68
LSAMP-205ENST00000490035 MARCH6O60337 910 aa10.81□□□□□ -0.68
LSAMP-205ENST00000490035 GZF1Q9H116 711 aaPredicted RBP10.81□□□□□ -0.68
LSAMP-205ENST00000490035 CNTLNQ9NXG0 1405 aa10.81□□□□□ -0.68
LSAMP-205ENST00000490035 RRP1P56182 461 aaKnown RBP10.81□□□□□ -0.68
LSAMP-205ENST00000490035 SLC4A10Q6U841 1118 aa10.81□□□□□ -0.68
LSAMP-205ENST00000490035 CDR1P51861 262 aa10.8□□□□□ -0.68
LSAMP-205ENST00000490035 AEBP2Q6ZN18 517 aaPredicted RBP10.8□□□□□ -0.68
LSAMP-205ENST00000490035 DIAPH3Q9NSV4 1193 aa10.8□□□□□ -0.68
LSAMP-205ENST00000490035 WASHC2AQ641Q2 1341 aa10.8□□□□□ -0.68
LSAMP-205ENST00000490035 GSE1Q14687 1217 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms