RNA–Protein interactions for RNA: ENST00000489917.1

SPATA9-206, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,046 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-206ENST00000489917 MMRN1Q13201 1228 aa9.45□□□□□ -0.9
SPATA9-206ENST00000489917 GRXCR2A6NFK2 248 aa9.44□□□□□ -0.9
SPATA9-206ENST00000489917 NBR1Q14596 966 aa9.44□□□□□ -0.9
SPATA9-206ENST00000489917 KCNH8Q96L42 1107 aa9.44□□□□□ -0.9
SPATA9-206ENST00000489917 RBM33Q96EV2 1170 aaKnown RBP9.43□□□□□ -0.9
SPATA9-206ENST00000489917 MLLT3P42568 568 aaPredicted RBP9.41□□□□□ -0.9
SPATA9-206ENST00000489917 PRIM1P49642 420 aaKnown RBP9.41□□□□□ -0.9
SPATA9-206ENST00000489917 EN1Q05925 392 aaPredicted RBP9.41□□□□□ -0.9
SPATA9-206ENST00000489917 ADGRD1Q6QNK2 874 aa9.41□□□□□ -0.9
SPATA9-206ENST00000489917 TK2O00142 265 aa9.4□□□□□ -0.9
SPATA9-206ENST00000489917 OSBPP22059 807 aa9.4□□□□□ -0.9
SPATA9-206ENST00000489917 C6orf132Q5T0Z8 1188 aa9.4□□□□□ -0.9
SPATA9-206ENST00000489917 COL9A1P20849 921 aa9.39□□□□□ -0.91
SPATA9-206ENST00000489917 PPP1R3GB7ZBB8 358 aa9.38□□□□□ -0.91
SPATA9-206ENST00000489917 SEMA3EO15041 775 aa9.38□□□□□ -0.91
SPATA9-206ENST00000489917 MAP3K7O43318 606 aa9.38□□□□□ -0.91
SPATA9-206ENST00000489917 TSR1Q2NL82 804 aaKnown RBP9.38□□□□□ -0.91
SPATA9-206ENST00000489917 ZBED2Q9BTP6 218 aa9.38□□□□□ -0.91
SPATA9-206ENST00000489917 SLC4A5Q9BY07 1137 aa9.37□□□□□ -0.91
SPATA9-206ENST00000489917 VPS9D1Q9Y2B5 631 aa9.37□□□□□ -0.91
SPATA9-206ENST00000489917 HRO43593 1189 aa9.36□□□□□ -0.91
SPATA9-206ENST00000489917 MYT1LQ9UL68 1186 aa9.34□□□□□ -0.91
SPATA9-206ENST00000489917 PROX2Q3B8N5 592 aa9.33□□□□□ -0.92
SPATA9-206ENST00000489917 CDHR5Q9HBB8 845 aa9.33□□□□□ -0.92
SPATA9-206ENST00000489917 RNF166Q96A37 237 aaPredicted RBP9.32□□□□□ -0.92
SPATA9-206ENST00000489917 TESPA1A2RU30 521 aaPredicted RBP9.31□□□□□ -0.92
SPATA9-206ENST00000489917 BHMG1C9JSJ3 638 aaPredicted RBP9.31□□□□□ -0.92
SPATA9-206ENST00000489917 CCDC180Q9P1Z9 1646 aa9.3□□□□□ -0.92
SPATA9-206ENST00000489917 RABGEF1Q9UJ41 708 aa9.28□□□□□ -0.92
SPATA9-206ENST00000489917 TRIM6-TRIM34B2RNG4 842 aa9.27□□□□□ -0.93
SPATA9-206ENST00000489917 CERKQ8TCT0 537 aa9.27□□□□□ -0.93
SPATA9-206ENST00000489917 STAC3Q96MF2 364 aa9.27□□□□□ -0.93
SPATA9-206ENST00000489917 NPDC1Q9NQX5 325 aaPredicted RBP9.27□□□□□ -0.93
SPATA9-206ENST00000489917 ONECUT3O60422 494 aaPredicted RBP9.26□□□□□ -0.93
SPATA9-206ENST00000489917 CDCA7LQ96GN5 454 aa9.26□□□□□ -0.93
SPATA9-206ENST00000489917 KIAA1468Q9P260 1216 aa9.26□□□□□ -0.93
SPATA9-206ENST00000489917 TSKSQ9UJT2 592 aa9.26□□□□□ -0.93
SPATA9-206ENST00000489917 PRSS12P56730 875 aa9.25□□□□□ -0.93
SPATA9-206ENST00000489917 SMYD5Q6GMV2 418 aa9.25□□□□□ -0.93
SPATA9-206ENST00000489917 NBPF3Q9H094 633 aa9.25□□□□□ -0.93
SPATA9-206ENST00000489917 RBM26Q5T8P6 1007 aaKnown RBP9.24□□□□□ -0.93
SPATA9-206ENST00000489917 MRPL50Q8N5N7 158 aaKnown RBP9.24□□□□□ -0.93
SPATA9-206ENST00000489917 FAM198AQ9UFP1 575 aa9.23□□□□□ -0.93
SPATA9-206ENST00000489917 NUTM2FA1L443 756 aa9.22□□□□□ -0.93
SPATA9-206ENST00000489917 PTGDRQ13258 359 aa9.22□□□□□ -0.93
SPATA9-206ENST00000489917 KCTD12Q96CX2 325 aaKnown RBP9.21□□□□□ -0.94
SPATA9-206ENST00000489917 RBM27Q9P2N5 1060 aaKnown RBP9.21□□□□□ -0.94
SPATA9-206ENST00000489917 SEPT9Q9UHD8 586 aaPredicted RBP9.21□□□□□ -0.94
SPATA9-206ENST00000489917 PADI6Q6TGC4 694 aa9.2□□□□□ -0.94
SPATA9-206ENST00000489917 PACS2Q86VP3 889 aa9.2□□□□□ -0.94
SPATA9-206ENST00000489917 GOLGA8CPA6NN73 597 aa9.19□□□□□ -0.94
SPATA9-206ENST00000489917 C3orf80F5H4A9 247 aa9.19□□□□□ -0.94
SPATA9-206ENST00000489917 LAPTM4BQ86VI4 370 aa9.19□□□□□ -0.94
SPATA9-206ENST00000489917 TTC13Q8NBP0 860 aa9.19□□□□□ -0.94
SPATA9-206ENST00000489917 SMAPO00193 183 aa9.17□□□□□ -0.94
SPATA9-206ENST00000489917 WNT2BQ93097 391 aa9.17□□□□□ -0.94
SPATA9-206ENST00000489917 BCANQ96GW7 911 aa9.17□□□□□ -0.94
SPATA9-206ENST00000489917 FCHSD2O94868 740 aa9.16□□□□□ -0.94
SPATA9-206ENST00000489917 FAM98CQ17RN3 349 aaKnown RBP9.16□□□□□ -0.94
SPATA9-206ENST00000489917 TATDN2Q93075 761 aa9.16□□□□□ -0.94
SPATA9-206ENST00000489917 ZFRQ96KR1 1074 aaKnown RBP9.16□□□□□ -0.94
SPATA9-206ENST00000489917 PNMA3Q9UL41 463 aa9.16□□□□□ -0.94
SPATA9-206ENST00000489917 NBPF26B4DH59 902 aa9.15□□□□□ -0.94
SPATA9-206ENST00000489917 NUDT18Q6ZVK8 323 aa9.15□□□□□ -0.94
SPATA9-206ENST00000489917 GPR37O15354 613 aa9.14□□□□□ -0.95
SPATA9-206ENST00000489917 THSD4Q6ZMP0 1018 aa9.14□□□□□ -0.95
SPATA9-206ENST00000489917 TULP1O00294 542 aaPredicted RBP9.13□□□□□ -0.95
SPATA9-206ENST00000489917 GPIHBP1Q8IV16 184 aa9.13□□□□□ -0.95
SPATA9-206ENST00000489917 ANKK1Q8NFD2 765 aa9.13□□□□□ -0.95
SPATA9-206ENST00000489917 HCSTQ9UBK5 93 aa9.13□□□□□ -0.95
SPATA9-206ENST00000489917 PTPN5P54829 565 aa9.12□□□□□ -0.95
SPATA9-206ENST00000489917 HIC1Q14526 733 aa9.12□□□□□ -0.95
SPATA9-206ENST00000489917 BCAMP50895 628 aa9.11□□□□□ -0.95
SPATA9-206ENST00000489917 SOWAHBA6NEL2 793 aa9.1□□□□□ -0.95
SPATA9-206ENST00000489917 FECHP22830 423 aa9.1□□□□□ -0.95
SPATA9-206ENST00000489917 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.1□□□□□ -0.95
SPATA9-206ENST00000489917 EYA1Q99502 592 aa9.1□□□□□ -0.95
SPATA9-206ENST00000489917 GNPATO15228 680 aa9.09□□□□□ -0.95
SPATA9-206ENST00000489917 FAM161AQ3B820 660 aa9.09□□□□□ -0.95
SPATA9-206ENST00000489917 ADGRG1Q9Y653 693 aa9.09□□□□□ -0.95
SPATA9-206ENST00000489917 SAMD7Q7Z3H4 446 aa9.07□□□□□ -0.96
SPATA9-206ENST00000489917 LRCH3Q96II8 777 aa9.07□□□□□ -0.96
SPATA9-206ENST00000489917 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.07□□□□□ -0.96
SPATA9-206ENST00000489917 LMOD2Q6P5Q4 547 aa9.06□□□□□ -0.96
SPATA9-206ENST00000489917 RBM46Q8TBY0 533 aaKnown RBP9.05□□□□□ -0.96
SPATA9-206ENST00000489917 SWT1Q5T5J6 900 aaKnown RBP9.03□□□□□ -0.96
SPATA9-206ENST00000489917 WBP1LQ9NX94 342 aa9.03□□□□□ -0.96
SPATA9-206ENST00000489917 TSR3Q9UJK0 312 aaKnown RBP9.03□□□□□ -0.96
SPATA9-206ENST00000489917 HPS5Q9UPZ3 1129 aa9.03□□□□□ -0.96
SPATA9-206ENST00000489917 HDGFP51858 240 aaKnown RBP9.02□□□□□ -0.97
SPATA9-206ENST00000489917 PXYLP1Q8TE99 480 aa9.02□□□□□ -0.97
SPATA9-206ENST00000489917 RCCD1A6NED2 376 aa9.01□□□□□ -0.97
SPATA9-206ENST00000489917 OATP04181 439 aa9.01□□□□□ -0.97
SPATA9-206ENST00000489917 DNAJB2P25686 324 aa9.01□□□□□ -0.97
SPATA9-206ENST00000489917 METTL3Q86U44 580 aaKnown RBP9.01□□□□□ -0.97
SPATA9-206ENST00000489917 RNF40O75150 1001 aa9□□□□□ -0.97
SPATA9-206ENST00000489917 PPP4CP60510 307 aa9□□□□□ -0.97
SPATA9-206ENST00000489917 TMEM134Q9H6X4 195 aa8.99□□□□□ -0.97
SPATA9-206ENST00000489917 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.98□□□□□ -0.97
SPATA9-206ENST00000489917 NYAP1Q6ZVC0 841 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms