RNA–Protein interactions for RNA: ENST00000489705.2

HNRNPU-211, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-211ENST00000489705 VSIG10Q8N0Z9 540 aa13.36□□□□□ -0.27
HNRNPU-211ENST00000489705 DMRTA1Q5VZB9 504 aa13.34□□□□□ -0.27
HNRNPU-211ENST00000489705 DDX12PQ92771 950 aa13.34□□□□□ -0.27
HNRNPU-211ENST00000489705 MYT1LQ9UL68 1186 aa13.34□□□□□ -0.27
HNRNPU-211ENST00000489705 EN1Q05925 392 aaPredicted RBP13.33□□□□□ -0.28
HNRNPU-211ENST00000489705 NBR1Q14596 966 aa13.32□□□□□ -0.28
HNRNPU-211ENST00000489705 HRO43593 1189 aa13.3□□□□□ -0.28
HNRNPU-211ENST00000489705 C6orf132Q5T0Z8 1188 aa13.3□□□□□ -0.28
HNRNPU-211ENST00000489705 ZBED2Q9BTP6 218 aa13.3□□□□□ -0.28
HNRNPU-211ENST00000489705 VPS9D1Q9Y2B5 631 aa13.3□□□□□ -0.28
HNRNPU-211ENST00000489705 RNF166Q96A37 237 aaPredicted RBP13.29□□□□□ -0.28
HNRNPU-211ENST00000489705 ONECUT3O60422 494 aaPredicted RBP13.28□□□□□ -0.28
HNRNPU-211ENST00000489705 CERKQ8TCT0 537 aa13.27□□□□□ -0.29
HNRNPU-211ENST00000489705 GRXCR2A6NFK2 248 aa13.25□□□□□ -0.29
HNRNPU-211ENST00000489705 MAP3K7O43318 606 aa13.25□□□□□ -0.29
HNRNPU-211ENST00000489705 STAC3Q96MF2 364 aa13.25□□□□□ -0.29
HNRNPU-211ENST00000489705 NBPF3Q9H094 633 aa13.24□□□□□ -0.29
HNRNPU-211ENST00000489705 OSBPP22059 807 aa13.23□□□□□ -0.29
HNRNPU-211ENST00000489705 RBM33Q96EV2 1170 aaKnown RBP13.22□□□□□ -0.29
HNRNPU-211ENST00000489705 KDM2AQ9Y2K7 1162 aa13.22□□□□□ -0.29
HNRNPU-211ENST00000489705 BHMG1C9JSJ3 638 aaPredicted RBP13.21□□□□□ -0.29
HNRNPU-211ENST00000489705 RABGEF1Q9UJ41 708 aa13.21□□□□□ -0.29
HNRNPU-211ENST00000489705 COL9A1P20849 921 aa13.2□□□□□ -0.3
HNRNPU-211ENST00000489705 RBM27Q9P2N5 1060 aaKnown RBP13.18□□□□□ -0.3
HNRNPU-211ENST00000489705 TRIM6-TRIM34B2RNG4 842 aa13.16□□□□□ -0.3
HNRNPU-211ENST00000489705 TSR1Q2NL82 804 aaKnown RBP13.15□□□□□ -0.3
HNRNPU-211ENST00000489705 SMYD5Q6GMV2 418 aa13.15□□□□□ -0.3
HNRNPU-211ENST00000489705 LAPTM4BQ86VI4 370 aa13.15□□□□□ -0.3
HNRNPU-211ENST00000489705 MRPL50Q8N5N7 158 aaKnown RBP13.15□□□□□ -0.3
HNRNPU-211ENST00000489705 MLLT3P42568 568 aaPredicted RBP13.13□□□□□ -0.31
HNRNPU-211ENST00000489705 PROX2Q3B8N5 592 aa13.13□□□□□ -0.31
HNRNPU-211ENST00000489705 PRIM1P49642 420 aaKnown RBP13.12□□□□□ -0.31
HNRNPU-211ENST00000489705 TESPA1A2RU30 521 aaPredicted RBP13.11□□□□□ -0.31
HNRNPU-211ENST00000489705 SEMA3EO15041 775 aa13.1□□□□□ -0.31
HNRNPU-211ENST00000489705 PRSS12P56730 875 aa13.1□□□□□ -0.31
HNRNPU-211ENST00000489705 PACS2Q86VP3 889 aa13.1□□□□□ -0.31
HNRNPU-211ENST00000489705 GOLGA8CPA6NN73 597 aa13.09□□□□□ -0.31
HNRNPU-211ENST00000489705 HCSTQ9UBK5 93 aa13.09□□□□□ -0.31
HNRNPU-211ENST00000489705 CDCA7LQ96GN5 454 aa13.08□□□□□ -0.32
HNRNPU-211ENST00000489705 KIAA1468Q9P260 1216 aa13.08□□□□□ -0.32
HNRNPU-211ENST00000489705 CDHR5Q9HBB8 845 aa13.05□□□□□ -0.32
HNRNPU-211ENST00000489705 NBPF26B4DH59 902 aa13.04□□□□□ -0.32
HNRNPU-211ENST00000489705 FAM98CQ17RN3 349 aaKnown RBP13.04□□□□□ -0.32
HNRNPU-211ENST00000489705 KCTD12Q96CX2 325 aaKnown RBP13.04□□□□□ -0.32
HNRNPU-211ENST00000489705 TSKSQ9UJT2 592 aa13.04□□□□□ -0.32
HNRNPU-211ENST00000489705 WNT2BQ93097 391 aa13.03□□□□□ -0.32
HNRNPU-211ENST00000489705 NPDC1Q9NQX5 325 aaPredicted RBP13.03□□□□□ -0.32
HNRNPU-211ENST00000489705 TTC13Q8NBP0 860 aa13.02□□□□□ -0.33
HNRNPU-211ENST00000489705 ANKK1Q8NFD2 765 aa13.02□□□□□ -0.33
HNRNPU-211ENST00000489705 TULP1O00294 542 aaPredicted RBP13□□□□□ -0.33
HNRNPU-211ENST00000489705 PTGDRQ13258 359 aa13□□□□□ -0.33
HNRNPU-211ENST00000489705 THSD4Q6ZMP0 1018 aa13□□□□□ -0.33
HNRNPU-211ENST00000489705 ZFRQ96KR1 1074 aaKnown RBP12.99□□□□□ -0.33
HNRNPU-211ENST00000489705 FCHSD2O94868 740 aa12.98□□□□□ -0.33
HNRNPU-211ENST00000489705 NUTM2FA1L443 756 aa12.96□□□□□ -0.33
HNRNPU-211ENST00000489705 TATDN2Q93075 761 aa12.96□□□□□ -0.33
HNRNPU-211ENST00000489705 PADI6Q6TGC4 694 aa12.95□□□□□ -0.34
HNRNPU-211ENST00000489705 NYAP1Q6ZVC0 841 aa12.95□□□□□ -0.34
HNRNPU-211ENST00000489705 FAM198AQ9UFP1 575 aa12.95□□□□□ -0.34
HNRNPU-211ENST00000489705 SEPT9Q9UHD8 586 aaPredicted RBP12.95□□□□□ -0.34
HNRNPU-211ENST00000489705 SOWAHBA6NEL2 793 aa12.94□□□□□ -0.34
HNRNPU-211ENST00000489705 HIC1Q14526 733 aa12.93□□□□□ -0.34
HNRNPU-211ENST00000489705 PNMA3Q9UL41 463 aa12.93□□□□□ -0.34
HNRNPU-211ENST00000489705 LRCH3Q96II8 777 aa12.91□□□□□ -0.34
HNRNPU-211ENST00000489705 NUDT18Q6ZVK8 323 aa12.9□□□□□ -0.34
HNRNPU-211ENST00000489705 RBM26Q5T8P6 1007 aaKnown RBP12.89□□□□□ -0.35
HNRNPU-211ENST00000489705 NECTIN2Q92692 538 aa12.89□□□□□ -0.35
HNRNPU-211ENST00000489705 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.89□□□□□ -0.35
HNRNPU-211ENST00000489705 HDGFP51858 240 aaKnown RBP12.88□□□□□ -0.35
HNRNPU-211ENST00000489705 PTPN5P54829 565 aa12.87□□□□□ -0.35
HNRNPU-211ENST00000489705 RBM46Q8TBY0 533 aaKnown RBP12.86□□□□□ -0.35
HNRNPU-211ENST00000489705 GPIHBP1Q8IV16 184 aa12.85□□□□□ -0.35
HNRNPU-211ENST00000489705 TSR3Q9UJK0 312 aaKnown RBP12.85□□□□□ -0.35
HNRNPU-211ENST00000489705 SMAPO00193 183 aa12.84□□□□□ -0.35
HNRNPU-211ENST00000489705 GNPATO15228 680 aa12.84□□□□□ -0.35
HNRNPU-211ENST00000489705 SLC4A3P48751 1232 aa12.84□□□□□ -0.35
HNRNPU-211ENST00000489705 BCAMP50895 628 aa12.84□□□□□ -0.35
HNRNPU-211ENST00000489705 EYA1Q99502 592 aa12.84□□□□□ -0.35
HNRNPU-211ENST00000489705 GPR37O15354 613 aa12.83□□□□□ -0.36
HNRNPU-211ENST00000489705 ADGRG1Q9Y653 693 aa12.83□□□□□ -0.36
HNRNPU-211ENST00000489705 OATP04181 439 aa12.82□□□□□ -0.36
HNRNPU-211ENST00000489705 C3orf80F5H4A9 247 aa12.81□□□□□ -0.36
HNRNPU-211ENST00000489705 SAMD7Q7Z3H4 446 aa12.81□□□□□ -0.36
HNRNPU-211ENST00000489705 DNAJB2P25686 324 aa12.8□□□□□ -0.36
HNRNPU-211ENST00000489705 IFFO2Q5TF58 517 aa12.8□□□□□ -0.36
HNRNPU-211ENST00000489705 HPS5Q9UPZ3 1129 aa12.8□□□□□ -0.36
HNRNPU-211ENST00000489705 SLF2Q8IX21 1173 aa12.79□□□□□ -0.36
HNRNPU-211ENST00000489705 PLA2G2EQ9NZK7 142 aa12.78□□□□□ -0.36
HNRNPU-211ENST00000489705 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.77□□□□□ -0.37
HNRNPU-211ENST00000489705 PPP4CP60510 307 aa12.77□□□□□ -0.37
HNRNPU-211ENST00000489705 WBP1LQ9NX94 342 aa12.76□□□□□ -0.37
HNRNPU-211ENST00000489705 TMEM134Q9H6X4 195 aa12.75□□□□□ -0.37
HNRNPU-211ENST00000489705 SLC24A1O60721 1099 aa12.74□□□□□ -0.37
HNRNPU-211ENST00000489705 PXYLP1Q8TE99 480 aa12.74□□□□□ -0.37
HNRNPU-211ENST00000489705 ITGBL1O95965 494 aaPredicted RBP12.73□□□□□ -0.37
HNRNPU-211ENST00000489705 SWT1Q5T5J6 900 aaKnown RBP12.73□□□□□ -0.37
HNRNPU-211ENST00000489705 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.73□□□□□ -0.37
HNRNPU-211ENST00000489705 PRR14Q9BWN1 585 aa12.72□□□□□ -0.37
HNRNPU-211ENST00000489705 RCCD1A6NED2 376 aa12.71□□□□□ -0.37
HNRNPU-211ENST00000489705 METTL3Q86U44 580 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms