RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 SETD1BQ9UPS6 1966 aaKnown RBP18.08■□□□□ 0.48
GGPS1-207ENST00000489692 NCOA1Q15788 1441 aa18.07■□□□□ 0.48
GGPS1-207ENST00000489692 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.07■□□□□ 0.48
GGPS1-207ENST00000489692 KDM5DQ9BY66 1539 aa18.07■□□□□ 0.48
GGPS1-207ENST00000489692 FGD6Q6ZV73 1430 aa18.06■□□□□ 0.48
GGPS1-207ENST00000489692 KIF15Q9NS87 1388 aa18.06■□□□□ 0.48
GGPS1-207ENST00000489692 PTPRTO14522 1441 aa18.06■□□□□ 0.48
GGPS1-207ENST00000489692 ABCC5O15440 1437 aa18.05■□□□□ 0.48
GGPS1-207ENST00000489692 CAMSAP1Q5T5Y3 1602 aa18.05■□□□□ 0.48
GGPS1-207ENST00000489692 PKD2Q13563 968 aa18.04■□□□□ 0.48
GGPS1-207ENST00000489692 PTPN23Q9H3S7 1636 aa18.03■□□□□ 0.48
GGPS1-207ENST00000489692 MAST1Q9Y2H9 1570 aa18.03■□□□□ 0.48
GGPS1-207ENST00000489692 PZPP20742 1482 aa18.02■□□□□ 0.48
GGPS1-207ENST00000489692 DAPK1P53355 1430 aa18.02■□□□□ 0.48
GGPS1-207ENST00000489692 ANKRD30AQ9BXX3 1397 aa18.01■□□□□ 0.47
GGPS1-207ENST00000489692 A2ML1A8K2U0 1454 aa18.01■□□□□ 0.47
GGPS1-207ENST00000489692 CEP170BQ9Y4F5 1589 aaPredicted RBP18■□□□□ 0.47
GGPS1-207ENST00000489692 DUOX2Q9NRD8 1548 aa18■□□□□ 0.47
GGPS1-207ENST00000489692 PPARGC1BQ86YN6 1023 aaKnown RBP18■□□□□ 0.47
GGPS1-207ENST00000489692 MYO3AQ8NEV4 1616 aa18■□□□□ 0.47
GGPS1-207ENST00000489692 FAM135AQ9P2D6 1515 aa17.99■□□□□ 0.47
GGPS1-207ENST00000489692 SHANK2Q9UPX8 1470 aa17.99■□□□□ 0.47
GGPS1-207ENST00000489692 STRCQ7RTU9 1775 aa17.99■□□□□ 0.47
GGPS1-207ENST00000489692 TRIM26Q12899 539 aaPredicted RBP17.98■□□□□ 0.47
GGPS1-207ENST00000489692 THEMISQ8N1K5 641 aaPredicted RBP17.98■□□□□ 0.47
GGPS1-207ENST00000489692 KANK1Q14678 1352 aa17.98■□□□□ 0.47
GGPS1-207ENST00000489692 TCOF1Q13428 1488 aaKnown RBP17.98■□□□□ 0.47
GGPS1-207ENST00000489692 PLA2R1Q13018 1463 aa17.97■□□□□ 0.47
GGPS1-207ENST00000489692 ANKLE2Q86XL3 938 aa17.96■□□□□ 0.47
GGPS1-207ENST00000489692 PCGF6Q9BYE7 350 aa17.96■□□□□ 0.47
GGPS1-207ENST00000489692 ABCC3O15438 1527 aa17.96■□□□□ 0.47
GGPS1-207ENST00000489692 ERBINQ96RT1 1412 aa17.96■□□□□ 0.47
GGPS1-207ENST00000489692 ZNF335Q9H4Z2 1342 aaPredicted RBP17.96■□□□□ 0.46
GGPS1-207ENST00000489692 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.95■□□□□ 0.46
GGPS1-207ENST00000489692 ITGAEP38570 1179 aa17.93■□□□□ 0.46
GGPS1-207ENST00000489692 NLRP1Q9C000 1473 aa17.93■□□□□ 0.46
GGPS1-207ENST00000489692 DNMT1P26358 1616 aaKnown RBP17.92■□□□□ 0.46
GGPS1-207ENST00000489692 RNF17Q9BXT8 1623 aaKnown RBP17.91■□□□□ 0.46
GGPS1-207ENST00000489692 EIF2AK4Q9P2K8 1649 aaKnown RBP17.91■□□□□ 0.46
GGPS1-207ENST00000489692 ZNF142P52746 1687 aaPredicted RBP17.91■□□□□ 0.46
GGPS1-207ENST00000489692 STAG3Q9UJ98 1225 aa17.91■□□□□ 0.46
GGPS1-207ENST00000489692 ERVK-7P63135 1459 aa17.89■□□□□ 0.45
GGPS1-207ENST00000489692 UGGT1Q9NYU2 1555 aa17.89■□□□□ 0.45
GGPS1-207ENST00000489692 UBAP1LF5GYI3 381 aa17.87■□□□□ 0.45
GGPS1-207ENST00000489692 CROCC2H7BZ55 1655 aa17.87■□□□□ 0.45
GGPS1-207ENST00000489692 HRCP23327 699 aa17.86■□□□□ 0.45
GGPS1-207ENST00000489692 MROH1Q8NDA8 1641 aa17.86■□□□□ 0.45
GGPS1-207ENST00000489692 ZC3H13Q5T200 1668 aaKnown RBP17.86■□□□□ 0.45
GGPS1-207ENST00000489692 ANKRD50Q9ULJ7 1429 aa17.85■□□□□ 0.45
GGPS1-207ENST00000489692 LTBP4Q8N2S1 1624 aa17.84■□□□□ 0.45
GGPS1-207ENST00000489692 SPATA31D1Q6ZQQ2 1576 aa17.84■□□□□ 0.45
GGPS1-207ENST00000489692 PRDM15P57071 1507 aaPredicted RBP17.84■□□□□ 0.45
GGPS1-207ENST00000489692 NPHP4O75161 1426 aaPredicted RBP17.84■□□□□ 0.45
GGPS1-207ENST00000489692 ARHGAP31Q2M1Z3 1444 aa17.83■□□□□ 0.45
GGPS1-207ENST00000489692 EID1Q9Y6B2 187 aa17.83■□□□□ 0.44
GGPS1-207ENST00000489692 ADGRL2O95490 1459 aa17.82■□□□□ 0.44
GGPS1-207ENST00000489692 SCAF1Q9H7N4 1312 aaKnown RBP17.82■□□□□ 0.44
GGPS1-207ENST00000489692 TXNDC2Q86VQ3 553 aa17.82■□□□□ 0.44
GGPS1-207ENST00000489692 CEP152O94986 1710 aa17.81■□□□□ 0.44
GGPS1-207ENST00000489692 IQSEC2Q5JU85 1478 aa17.78■□□□□ 0.44
GGPS1-207ENST00000489692 IDI1Q13907 227 aa17.78■□□□□ 0.44
GGPS1-207ENST00000489692 BCANQ96GW7 911 aa17.77■□□□□ 0.44
GGPS1-207ENST00000489692 LTKP29376 864 aa17.76■□□□□ 0.43
GGPS1-207ENST00000489692 PIP4K2BP78356 416 aa17.76■□□□□ 0.43
GGPS1-207ENST00000489692 NEURL4Q96JN8 1562 aa17.75■□□□□ 0.43
GGPS1-207ENST00000489692 CHGAP10645 457 aaKnown RBP17.75■□□□□ 0.43
GGPS1-207ENST00000489692 LMTK2Q8IWU2 1503 aa17.75■□□□□ 0.43
GGPS1-207ENST00000489692 ROCK1Q13464 1354 aa17.75■□□□□ 0.43
GGPS1-207ENST00000489692 SCAF11Q99590 1463 aaKnown RBP17.75■□□□□ 0.43
GGPS1-207ENST00000489692 DEPDC5O75140 1603 aa17.74■□□□□ 0.43
GGPS1-207ENST00000489692 TOM1O60784 492 aa17.74■□□□□ 0.43
GGPS1-207ENST00000489692 SENP3Q9H4L4 574 aaPredicted RBP17.74■□□□□ 0.43
GGPS1-207ENST00000489692 SLC52A1Q9NWF4 448 aa17.74■□□□□ 0.43
GGPS1-207ENST00000489692 MED14O60244 1454 aa17.74■□□□□ 0.43
GGPS1-207ENST00000489692 TMEM2Q9UHN6 1383 aa17.72■□□□□ 0.43
GGPS1-207ENST00000489692 CPS1P31327 1500 aa17.72■□□□□ 0.43
GGPS1-207ENST00000489692 NUP155O75694 1391 aa17.71■□□□□ 0.43
GGPS1-207ENST00000489692 PPP1R15AO75807 674 aaPredicted RBP17.71■□□□□ 0.43
GGPS1-207ENST00000489692 POLR1AO95602 1720 aaPredicted RBP17.71■□□□□ 0.43
GGPS1-207ENST00000489692 VWDEQ8N2E2 1590 aa17.7■□□□□ 0.42
GGPS1-207ENST00000489692 EFCAB6Q5THR3 1501 aa17.7■□□□□ 0.42
GGPS1-207ENST00000489692 CFAP65Q6ZU64 1925 aaKnown RBP17.69■□□□□ 0.42
GGPS1-207ENST00000489692 NOS1P29475 1434 aa17.69■□□□□ 0.42
GGPS1-207ENST00000489692 DISP3Q9P2K9 1392 aa17.68■□□□□ 0.42
GGPS1-207ENST00000489692 HDGFP51858 240 aaKnown RBP17.67■□□□□ 0.42
GGPS1-207ENST00000489692 SLC26A8Q96RN1 970 aa17.67■□□□□ 0.42
GGPS1-207ENST00000489692 ARHGAP23Q9P227 1491 aa17.67■□□□□ 0.42
GGPS1-207ENST00000489692 IQGAP1P46940 1657 aa17.67■□□□□ 0.42
GGPS1-207ENST00000489692 SLIT1O75093 1534 aa17.67■□□□□ 0.42
GGPS1-207ENST00000489692 UBR1Q8IWV7 1749 aa17.67■□□□□ 0.42
GGPS1-207ENST00000489692 PIK3C2BO00750 1634 aa17.66■□□□□ 0.42
GGPS1-207ENST00000489692 RPRD2Q5VT52 1461 aaKnown RBP17.66■□□□□ 0.42
GGPS1-207ENST00000489692 SYNMO15061 1565 aa17.64■□□□□ 0.41
GGPS1-207ENST00000489692 NUTM2DQ5VT03 806 aaPredicted RBP17.62■□□□□ 0.41
GGPS1-207ENST00000489692 TRIM52Q96A61 297 aa17.62■□□□□ 0.41
GGPS1-207ENST00000489692 ADGRB3O60242 1522 aa17.62■□□□□ 0.41
GGPS1-207ENST00000489692 HSPA1LP34931 641 aa17.61■□□□□ 0.41
GGPS1-207ENST00000489692 RRBP1Q9P2E9 1410 aaKnown RBP17.61■□□□□ 0.41
GGPS1-207ENST00000489692 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.6■□□□□ 0.41
GGPS1-207ENST00000489692 LRRC7Q96NW7 1537 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms