RNA–Protein interactions for RNA: ENST00000488998.1

CCDC146-209, Transcript of coiled-coil domain containing 146, humanhuman

TSL 3

Gene CCDC146, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146-209ENST00000488998 EPAS1Q99814 870 aa7.83□□□□□ -1.16
CCDC146-209ENST00000488998 PLSCR2Q9NRY7 297 aa7.83□□□□□ -1.16
CCDC146-209ENST00000488998 PTPREP23469 700 aa7.82□□□□□ -1.16
CCDC146-209ENST00000488998 KCNH8Q96L42 1107 aa7.82□□□□□ -1.16
CCDC146-209ENST00000488998 MAP3K7O43318 606 aa7.81□□□□□ -1.16
CCDC146-209ENST00000488998 OSBPP22059 807 aa7.81□□□□□ -1.16
CCDC146-209ENST00000488998 C6orf132Q5T0Z8 1188 aa7.81□□□□□ -1.16
CCDC146-209ENST00000488998 COL9A1P20849 921 aa7.8□□□□□ -1.16
CCDC146-209ENST00000488998 TSR1Q2NL82 804 aaKnown RBP7.8□□□□□ -1.16
CCDC146-209ENST00000488998 SPNS2Q8IVW8 549 aa7.8□□□□□ -1.16
CCDC146-209ENST00000488998 EN1Q05925 392 aaPredicted RBP7.79□□□□□ -1.16
CCDC146-209ENST00000488998 SLC24A1O60721 1099 aa7.77□□□□□ -1.17
CCDC146-209ENST00000488998 ADGRD1Q6QNK2 874 aa7.77□□□□□ -1.17
CCDC146-209ENST00000488998 VPS9D1Q9Y2B5 631 aa7.76□□□□□ -1.17
CCDC146-209ENST00000488998 TESPA1A2RU30 521 aaPredicted RBP7.75□□□□□ -1.17
CCDC146-209ENST00000488998 PPP1R3GB7ZBB8 358 aa7.75□□□□□ -1.17
CCDC146-209ENST00000488998 PROX2Q3B8N5 592 aa7.75□□□□□ -1.17
CCDC146-209ENST00000488998 ZBED2Q9BTP6 218 aa7.75□□□□□ -1.17
CCDC146-209ENST00000488998 CDHR5Q9HBB8 845 aa7.75□□□□□ -1.17
CCDC146-209ENST00000488998 TK2O00142 265 aa7.73□□□□□ -1.17
CCDC146-209ENST00000488998 MMRN1Q13201 1228 aa7.73□□□□□ -1.17
CCDC146-209ENST00000488998 RBM26Q5T8P6 1007 aaKnown RBP7.73□□□□□ -1.17
CCDC146-209ENST00000488998 NUTM2FA1L443 756 aa7.72□□□□□ -1.17
CCDC146-209ENST00000488998 HRO43593 1189 aa7.71□□□□□ -1.18
CCDC146-209ENST00000488998 STAC3Q96MF2 364 aa7.71□□□□□ -1.18
CCDC146-209ENST00000488998 SLC4A5Q9BY07 1137 aa7.71□□□□□ -1.18
CCDC146-209ENST00000488998 MYT1LQ9UL68 1186 aa7.71□□□□□ -1.18
CCDC146-209ENST00000488998 SMYD5Q6GMV2 418 aa7.7□□□□□ -1.18
CCDC146-209ENST00000488998 NPDC1Q9NQX5 325 aaPredicted RBP7.7□□□□□ -1.18
CCDC146-209ENST00000488998 KIAA1468Q9P260 1216 aa7.7□□□□□ -1.18
CCDC146-209ENST00000488998 CDCA7LQ96GN5 454 aa7.69□□□□□ -1.18
CCDC146-209ENST00000488998 TRIM6-TRIM34B2RNG4 842 aa7.68□□□□□ -1.18
CCDC146-209ENST00000488998 PRSS12P56730 875 aa7.68□□□□□ -1.18
CCDC146-209ENST00000488998 TSKSQ9UJT2 592 aa7.68□□□□□ -1.18
CCDC146-209ENST00000488998 BHMG1C9JSJ3 638 aaPredicted RBP7.67□□□□□ -1.18
CCDC146-209ENST00000488998 RABGEF1Q9UJ41 708 aa7.67□□□□□ -1.18
CCDC146-209ENST00000488998 PTGDRQ13258 359 aa7.66□□□□□ -1.18
CCDC146-209ENST00000488998 MRPL50Q8N5N7 158 aaKnown RBP7.66□□□□□ -1.18
CCDC146-209ENST00000488998 CERKQ8TCT0 537 aa7.66□□□□□ -1.18
CCDC146-209ENST00000488998 RNF166Q96A37 237 aaPredicted RBP7.66□□□□□ -1.18
CCDC146-209ENST00000488998 FAM198AQ9UFP1 575 aa7.66□□□□□ -1.18
CCDC146-209ENST00000488998 SEPT9Q9UHD8 586 aaPredicted RBP7.66□□□□□ -1.18
CCDC146-209ENST00000488998 C3orf80F5H4A9 247 aa7.65□□□□□ -1.18
CCDC146-209ENST00000488998 PACS2Q86VP3 889 aa7.65□□□□□ -1.18
CCDC146-209ENST00000488998 SMAPO00193 183 aa7.64□□□□□ -1.19
CCDC146-209ENST00000488998 PADI6Q6TGC4 694 aa7.64□□□□□ -1.19
CCDC146-209ENST00000488998 KCTD12Q96CX2 325 aaKnown RBP7.64□□□□□ -1.19
CCDC146-209ENST00000488998 NBPF3Q9H094 633 aa7.64□□□□□ -1.19
CCDC146-209ENST00000488998 GOLGA8CPA6NN73 597 aa7.63□□□□□ -1.19
CCDC146-209ENST00000488998 TULP1O00294 542 aaPredicted RBP7.63□□□□□ -1.19
CCDC146-209ENST00000488998 ONECUT3O60422 494 aaPredicted RBP7.63□□□□□ -1.19
CCDC146-209ENST00000488998 FCHSD2O94868 740 aa7.62□□□□□ -1.19
CCDC146-209ENST00000488998 FAM161AQ3B820 660 aa7.61□□□□□ -1.19
CCDC146-209ENST00000488998 NUDT18Q6ZVK8 323 aa7.61□□□□□ -1.19
CCDC146-209ENST00000488998 TTC13Q8NBP0 860 aa7.61□□□□□ -1.19
CCDC146-209ENST00000488998 TATDN2Q93075 761 aa7.61□□□□□ -1.19
CCDC146-209ENST00000488998 WNT2BQ93097 391 aa7.61□□□□□ -1.19
CCDC146-209ENST00000488998 FECHP22830 423 aa7.6□□□□□ -1.19
CCDC146-209ENST00000488998 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.6□□□□□ -1.19
CCDC146-209ENST00000488998 GPIHBP1Q8IV16 184 aa7.6□□□□□ -1.19
CCDC146-209ENST00000488998 PNMA3Q9UL41 463 aa7.6□□□□□ -1.19
CCDC146-209ENST00000488998 ZFRQ96KR1 1074 aaKnown RBP7.59□□□□□ -1.19
CCDC146-209ENST00000488998 RBM27Q9P2N5 1060 aaKnown RBP7.59□□□□□ -1.19
CCDC146-209ENST00000488998 NBPF26B4DH59 902 aa7.58□□□□□ -1.2
CCDC146-209ENST00000488998 GPR37O15354 613 aa7.58□□□□□ -1.2
CCDC146-209ENST00000488998 PTPN5P54829 565 aa7.58□□□□□ -1.2
CCDC146-209ENST00000488998 FAM98CQ17RN3 349 aaKnown RBP7.58□□□□□ -1.2
CCDC146-209ENST00000488998 LAPTM4BQ86VI4 370 aa7.58□□□□□ -1.2
CCDC146-209ENST00000488998 HIC1Q14526 733 aa7.57□□□□□ -1.2
CCDC146-209ENST00000488998 LMOD2Q6P5Q4 547 aa7.57□□□□□ -1.2
CCDC146-209ENST00000488998 GNPATO15228 680 aa7.56□□□□□ -1.2
CCDC146-209ENST00000488998 BCAMP50895 628 aa7.56□□□□□ -1.2
CCDC146-209ENST00000488998 ANKK1Q8NFD2 765 aa7.56□□□□□ -1.2
CCDC146-209ENST00000488998 THSD4Q6ZMP0 1018 aa7.55□□□□□ -1.2
CCDC146-209ENST00000488998 ADGRG1Q9Y653 693 aa7.55□□□□□ -1.2
CCDC146-209ENST00000488998 SAMD7Q7Z3H4 446 aa7.54□□□□□ -1.2
CCDC146-209ENST00000488998 EYA1Q99502 592 aa7.54□□□□□ -1.2
CCDC146-209ENST00000488998 HCSTQ9UBK5 93 aa7.54□□□□□ -1.2
CCDC146-209ENST00000488998 SOWAHBA6NEL2 793 aa7.52□□□□□ -1.21
CCDC146-209ENST00000488998 RBM46Q8TBY0 533 aaKnown RBP7.52□□□□□ -1.21
CCDC146-209ENST00000488998 BCANQ96GW7 911 aa7.52□□□□□ -1.21
CCDC146-209ENST00000488998 LRCH3Q96II8 777 aa7.52□□□□□ -1.21
CCDC146-209ENST00000488998 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.52□□□□□ -1.21
CCDC146-209ENST00000488998 RCCD1A6NED2 376 aa7.5□□□□□ -1.21
CCDC146-209ENST00000488998 RNF40O75150 1001 aa7.5□□□□□ -1.21
CCDC146-209ENST00000488998 OATP04181 439 aa7.5□□□□□ -1.21
CCDC146-209ENST00000488998 HDGFP51858 240 aaKnown RBP7.5□□□□□ -1.21
CCDC146-209ENST00000488998 SWT1Q5T5J6 900 aaKnown RBP7.5□□□□□ -1.21
CCDC146-209ENST00000488998 NLRP7Q8WX94 980 aa7.5□□□□□ -1.21
CCDC146-209ENST00000488998 WBP1LQ9NX94 342 aa7.5□□□□□ -1.21
CCDC146-209ENST00000488998 HPS5Q9UPZ3 1129 aa7.5□□□□□ -1.21
CCDC146-209ENST00000488998 ZC3H15Q8WU90 426 aaKnown RBP7.49□□□□□ -1.21
CCDC146-209ENST00000488998 METTL3Q86U44 580 aaKnown RBP7.48□□□□□ -1.21
CCDC146-209ENST00000488998 PXYLP1Q8TE99 480 aa7.48□□□□□ -1.21
CCDC146-209ENST00000488998 DNAJB2P25686 324 aa7.47□□□□□ -1.21
CCDC146-209ENST00000488998 PPP4CP60510 307 aa7.47□□□□□ -1.21
CCDC146-209ENST00000488998 PHOX2BQ99453 314 aa7.47□□□□□ -1.21
CCDC146-209ENST00000488998 TSR3Q9UJK0 312 aaKnown RBP7.47□□□□□ -1.21
CCDC146-209ENST00000488998 IRF6O14896 467 aa7.46□□□□□ -1.22
CCDC146-209ENST00000488998 MAP2K5Q13163 448 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms