RNA–Protein interactions for RNA: ENST00000488998.1

CCDC146-209, Transcript of coiled-coil domain containing 146, humanhuman

TSL 3

Gene CCDC146, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146-209ENST00000488998 AEBP2Q6ZN18 517 aaPredicted RBP18.1■□□□□ 0.49
CCDC146-209ENST00000488998 CHIC1Q5VXU3 224 aa17.52■□□□□ 0.4
CCDC146-209ENST00000488998 PHF23Q9BUL5 403 aaPredicted RBP15.44■□□□□ 0.06
CCDC146-209ENST00000488998 SENP3Q9H4L4 574 aaPredicted RBP15.32■□□□□ 0.04
CCDC146-209ENST00000488998 FOXD1Q16676 465 aa14.29□□□□□ -0.12
CCDC146-209ENST00000488998 PLPPR3Q6T4P5 718 aa14.17□□□□□ -0.14
CCDC146-209ENST00000488998 PPP6R1Q9UPN7 881 aa13.69□□□□□ -0.22
CCDC146-209ENST00000488998 ADRA2BP18089 450 aa13.68□□□□□ -0.22
CCDC146-209ENST00000488998 PIAS4Q8N2W9 510 aaPredicted RBP13.44□□□□□ -0.26
CCDC146-209ENST00000488998 MSH5O43196 834 aa13.16□□□□□ -0.3
CCDC146-209ENST00000488998 PPP4R3CPQ6ZMV5 832 aa12.51□□□□□ -0.41
CCDC146-209ENST00000488998 MAPK8IP2Q13387 824 aaPredicted RBP12.46□□□□□ -0.41
CCDC146-209ENST00000488998 SCAF1Q9H7N4 1312 aaKnown RBP12.44□□□□□ -0.42
CCDC146-209ENST00000488998 POTEDQ86YR6 584 aa12.24□□□□□ -0.45
CCDC146-209ENST00000488998 DMRT2Q9Y5R5 561 aa12.22□□□□□ -0.45
CCDC146-209ENST00000488998 CNKSR2Q8WXI2 1034 aa12.14□□□□□ -0.47
CCDC146-209ENST00000488998 KCNA4P22459 653 aa12.11□□□□□ -0.47
CCDC146-209ENST00000488998 NCBP3Q53F19 620 aaKnown RBP12.11□□□□□ -0.47
CCDC146-209ENST00000488998 NPM3O75607 178 aaKnown RBP11.97□□□□□ -0.49
CCDC146-209ENST00000488998 RNF216Q9NWF9 866 aaPredicted RBP11.93□□□□□ -0.5
CCDC146-209ENST00000488998 HOXD11P31277 338 aaPredicted RBP11.91□□□□□ -0.5
CCDC146-209ENST00000488998 DCAF8L1A6NGE4 600 aa11.79□□□□□ -0.52
CCDC146-209ENST00000488998 DNAJC5BQ9UF47 199 aa11.51□□□□□ -0.57
CCDC146-209ENST00000488998 SLC4A1APQ9BWU0 796 aaKnown RBP11.5□□□□□ -0.57
CCDC146-209ENST00000488998 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.41□□□□□ -0.58
CCDC146-209ENST00000488998 SLC4A2P04920 1241 aa11.34□□□□□ -0.59
CCDC146-209ENST00000488998 RNF39Q9H2S5 420 aa11.29□□□□□ -0.6
CCDC146-209ENST00000488998 U3KPZ7 1027 aaPredicted RBP11.19□□□□□ -0.62
CCDC146-209ENST00000488998 ZBTB22O15209 634 aa11.15□□□□□ -0.62
CCDC146-209ENST00000488998 C1QBPQ07021 282 aaKnown RBP11.13□□□□□ -0.63
CCDC146-209ENST00000488998 FOXD4L1Q9NU39 408 aa11.13□□□□□ -0.63
CCDC146-209ENST00000488998 CACNB1Q02641 598 aaPredicted RBP11.12□□□□□ -0.63
CCDC146-209ENST00000488998 EHMT2Q96KQ7 1210 aa11.1□□□□□ -0.63
CCDC146-209ENST00000488998 MYCNP04198 464 aaPredicted RBP11.02□□□□□ -0.65
CCDC146-209ENST00000488998 CSRNP3Q8WYN3 585 aa10.98□□□□□ -0.65
CCDC146-209ENST00000488998 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.95□□□□□ -0.66
CCDC146-209ENST00000488998 HNRNPUL2Q1KMD3 747 aaKnown RBP10.95□□□□□ -0.66
CCDC146-209ENST00000488998 SPINK5Q9NQ38 1064 aaPredicted RBP10.95□□□□□ -0.66
CCDC146-209ENST00000488998 SAMD1Q6SPF0 538 aaPredicted RBP10.93□□□□□ -0.66
CCDC146-209ENST00000488998 CAPN15O75808 1086 aa10.91□□□□□ -0.66
CCDC146-209ENST00000488998 APLP2Q06481 763 aa10.85□□□□□ -0.67
CCDC146-209ENST00000488998 TRHP20396 242 aaPredicted RBP10.84□□□□□ -0.67
CCDC146-209ENST00000488998 ATF5Q9Y2D1 282 aaPredicted RBP10.81□□□□□ -0.68
CCDC146-209ENST00000488998 ZNF219Q9P2Y4 722 aaPredicted RBP10.75□□□□□ -0.69
CCDC146-209ENST00000488998 ATXN8OSP0DMR3 200 aa10.72□□□□□ -0.69
CCDC146-209ENST00000488998 ABCB7O75027 752 aa10.71□□□□□ -0.69
CCDC146-209ENST00000488998 DSG3P32926 999 aa10.71□□□□□ -0.69
CCDC146-209ENST00000488998 POLA2Q14181 598 aa10.63□□□□□ -0.71
CCDC146-209ENST00000488998 ZBTB12Q9Y330 459 aaPredicted RBP10.36□□□□□ -0.75
CCDC146-209ENST00000488998 FBLN2P98095 1184 aa10.32□□□□□ -0.76
CCDC146-209ENST00000488998 MKRN4PQ13434 485 aaPredicted RBP10.31□□□□□ -0.76
CCDC146-209ENST00000488998 OSCARQ8IYS5 282 aa10.26□□□□□ -0.77
CCDC146-209ENST00000488998 RBM42Q9BTD8 480 aaKnown RBP10.17□□□□□ -0.78
CCDC146-209ENST00000488998 SPDYE2BA6NHP3 402 aa10.09□□□□□ -0.79
CCDC146-209ENST00000488998 SPDYE6P0CI01 402 aa10.09□□□□□ -0.79
CCDC146-209ENST00000488998 SPDYE2Q495Y8 402 aa10.09□□□□□ -0.79
CCDC146-209ENST00000488998 ZNF692Q9BU19 519 aaPredicted RBP10.09□□□□□ -0.79
CCDC146-209ENST00000488998 AKT1S1Q96B36 256 aa10.04□□□□□ -0.8
CCDC146-209ENST00000488998 SPDYE4A6NLX3 237 aa10.02□□□□□ -0.81
CCDC146-209ENST00000488998 SSUH2Q9Y2M2 353 aa10□□□□□ -0.81
CCDC146-209ENST00000488998 REM2Q8IYK8 340 aaPredicted RBP9.98□□□□□ -0.81
CCDC146-209ENST00000488998 PABPN1Q86U42 306 aaKnown RBP eCLIP9.95□□□□□ -0.82
CCDC146-209ENST00000488998 FKBP8Q14318 412 aa9.94□□□□□ -0.82
CCDC146-209ENST00000488998 PITPNM1O00562 1244 aa9.87□□□□□ -0.83
CCDC146-209ENST00000488998 CLEC11AQ9Y240 323 aa9.86□□□□□ -0.83
CCDC146-209ENST00000488998 CHRDL2Q6WN34 429 aa9.84□□□□□ -0.83
CCDC146-209ENST00000488998 SPDYE1Q8NFV5 336 aaPredicted RBP9.83□□□□□ -0.84
CCDC146-209ENST00000488998 PROM2Q8N271 834 aa9.78□□□□□ -0.84
CCDC146-209ENST00000488998 PRR29P0C7W0 189 aa9.72□□□□□ -0.85
CCDC146-209ENST00000488998 PIP4P2Q8N4L2 257 aa9.7□□□□□ -0.86
CCDC146-209ENST00000488998 STAG3Q9UJ98 1225 aa9.7□□□□□ -0.86
CCDC146-209ENST00000488998 FXR2P51116 673 aaKnown RBP eCLIP9.68□□□□□ -0.86
CCDC146-209ENST00000488998 POTEHQ6S545 545 aa9.65□□□□□ -0.86
CCDC146-209ENST00000488998 PRKAR2AP13861 404 aaKnown RBP9.63□□□□□ -0.87
CCDC146-209ENST00000488998 CHADLQ6NUI6 762 aa9.63□□□□□ -0.87
CCDC146-209ENST00000488998 FBXO3Q9UK99 471 aa9.57□□□□□ -0.88
CCDC146-209ENST00000488998 CREBZFQ9NS37 354 aa9.56□□□□□ -0.88
CCDC146-209ENST00000488998 MIER1Q8N108 512 aa9.55□□□□□ -0.88
CCDC146-209ENST00000488998 PLCD3Q8N3E9 789 aa9.51□□□□□ -0.89
CCDC146-209ENST00000488998 FARP1Q9Y4F1 1045 aaPredicted RBP9.49□□□□□ -0.89
CCDC146-209ENST00000488998 VASPP50552 380 aaPredicted RBP9.46□□□□□ -0.9
CCDC146-209ENST00000488998 HAX1O00165 279 aa9.45□□□□□ -0.9
CCDC146-209ENST00000488998 PLEKHG5O94827 1062 aa9.44□□□□□ -0.9
CCDC146-209ENST00000488998 MNX1P50219 401 aaPredicted RBP9.44□□□□□ -0.9
CCDC146-209ENST00000488998 NPM1P06748 294 aaKnown RBP eCLIP9.38□□□□□ -0.91
CCDC146-209ENST00000488998 EVX2Q03828 476 aa9.38□□□□□ -0.91
CCDC146-209ENST00000488998 KLHL34Q8N239 644 aa9.37□□□□□ -0.91
CCDC146-209ENST00000488998 C19orf67A6NJJ6 358 aa9.35□□□□□ -0.91
CCDC146-209ENST00000488998 IFNLR1Q8IU57 520 aaPredicted RBP9.35□□□□□ -0.91
CCDC146-209ENST00000488998 CD44P16070 742 aaKnown RBP9.34□□□□□ -0.91
CCDC146-209ENST00000488998 ZBTB47Q9UFB7 747 aaPredicted RBP9.34□□□□□ -0.91
CCDC146-209ENST00000488998 TSPYL2Q9H2G4 693 aaPredicted RBP9.29□□□□□ -0.92
CCDC146-209ENST00000488998 NUBP1P53384 320 aa9.28□□□□□ -0.92
CCDC146-209ENST00000488998 RASEFQ8IZ41 740 aa9.28□□□□□ -0.92
CCDC146-209ENST00000488998 ZRANB1Q9UGI0 708 aa9.28□□□□□ -0.92
CCDC146-209ENST00000488998 PAK3O75914 559 aaPredicted RBP9.25□□□□□ -0.93
CCDC146-209ENST00000488998 SP7Q8TDD2 431 aaPredicted RBP9.23□□□□□ -0.93
CCDC146-209ENST00000488998 SPOCK2Q92563 424 aa9.23□□□□□ -0.93
CCDC146-209ENST00000488998 DCAF8Q5TAQ9 597 aa9.21□□□□□ -0.94
CCDC146-209ENST00000488998 PHF12Q96QT6 1004 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms