RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 WNT2BQ93097 391 aa8.73□□□□□ -1.01
KDM3A-213ENST00000488971 PHF14O94880 888 aa8.72□□□□□ -1.01
KDM3A-213ENST00000488971 FBXW7Q969H0 707 aa8.72□□□□□ -1.01
KDM3A-213ENST00000488971 PPP1R3GB7ZBB8 358 aa8.71□□□□□ -1.02
KDM3A-213ENST00000488971 DPYSL4O14531 572 aa8.71□□□□□ -1.02
KDM3A-213ENST00000488971 THSD4Q6ZMP0 1018 aa8.71□□□□□ -1.02
KDM3A-213ENST00000488971 CAMK2BQ13554 666 aa8.7□□□□□ -1.02
KDM3A-213ENST00000488971 COL9A1P20849 921 aa8.68□□□□□ -1.02
KDM3A-213ENST00000488971 PROX2Q3B8N5 592 aa8.68□□□□□ -1.02
KDM3A-213ENST00000488971 SPRYD3Q8NCJ5 442 aa8.68□□□□□ -1.02
KDM3A-213ENST00000488971 RABGEF1Q9UJ41 708 aa8.68□□□□□ -1.02
KDM3A-213ENST00000488971 KDM2AQ9Y2K7 1162 aa8.68□□□□□ -1.02
KDM3A-213ENST00000488971 PAXIP1Q6ZW49 1069 aaPredicted RBP8.67□□□□□ -1.02
KDM3A-213ENST00000488971 EPAS1Q99814 870 aa8.67□□□□□ -1.02
KDM3A-213ENST00000488971 RBM33Q96EV2 1170 aaKnown RBP8.66□□□□□ -1.02
KDM3A-213ENST00000488971 C6orf132Q5T0Z8 1188 aa8.65□□□□□ -1.02
KDM3A-213ENST00000488971 ANKK1Q8NFD2 765 aa8.65□□□□□ -1.02
KDM3A-213ENST00000488971 DDX12PQ92771 950 aa8.65□□□□□ -1.02
KDM3A-213ENST00000488971 KIAA1468Q9P260 1216 aa8.64□□□□□ -1.03
KDM3A-213ENST00000488971 PRKCSHP14314 528 aaPredicted RBP8.63□□□□□ -1.03
KDM3A-213ENST00000488971 CFAP44Q96MT7 982 aa8.63□□□□□ -1.03
KDM3A-213ENST00000488971 LAPTM4BQ86VI4 370 aa8.61□□□□□ -1.03
KDM3A-213ENST00000488971 NBR1Q14596 966 aa8.6□□□□□ -1.03
KDM3A-213ENST00000488971 MAP3K7O43318 606 aa8.59□□□□□ -1.03
KDM3A-213ENST00000488971 ONECUT3O60422 494 aaPredicted RBP8.59□□□□□ -1.03
KDM3A-213ENST00000488971 BCAMP50895 628 aa8.59□□□□□ -1.03
KDM3A-213ENST00000488971 ZFRQ96KR1 1074 aaKnown RBP8.59□□□□□ -1.03
KDM3A-213ENST00000488971 WDR70Q9NW82 654 aa8.59□□□□□ -1.03
KDM3A-213ENST00000488971 SEPT9Q9UHD8 586 aaPredicted RBP8.59□□□□□ -1.03
KDM3A-213ENST00000488971 SPDYE16A6NNV3 312 aaPredicted RBP8.58□□□□□ -1.04
KDM3A-213ENST00000488971 TRIM6-TRIM34B2RNG4 842 aa8.58□□□□□ -1.04
KDM3A-213ENST00000488971 IFFO2Q5TF58 517 aa8.58□□□□□ -1.04
KDM3A-213ENST00000488971 SOWAHBA6NEL2 793 aa8.57□□□□□ -1.04
KDM3A-213ENST00000488971 EN1Q05925 392 aaPredicted RBP8.57□□□□□ -1.04
KDM3A-213ENST00000488971 PDIA6Q15084 440 aa8.57□□□□□ -1.04
KDM3A-213ENST00000488971 E2F4Q16254 413 aa8.57□□□□□ -1.04
KDM3A-213ENST00000488971 A0A0G2JS52 829 aa8.55□□□□□ -1.04
KDM3A-213ENST00000488971 FAM98CQ17RN3 349 aaKnown RBP8.55□□□□□ -1.04
KDM3A-213ENST00000488971 TSR1Q2NL82 804 aaKnown RBP8.55□□□□□ -1.04
KDM3A-213ENST00000488971 TSHZ2Q9NRE2 1034 aa8.55□□□□□ -1.04
KDM3A-213ENST00000488971 PACS2Q86VP3 889 aa8.54□□□□□ -1.04
KDM3A-213ENST00000488971 GRXCR2A6NFK2 248 aa8.53□□□□□ -1.04
KDM3A-213ENST00000488971 RGS20O76081 388 aa8.53□□□□□ -1.04
KDM3A-213ENST00000488971 LRCH3Q96II8 777 aa8.53□□□□□ -1.04
KDM3A-213ENST00000488971 TPRNQ4KMQ1 711 aa8.52□□□□□ -1.05
KDM3A-213ENST00000488971 NYAP1Q6ZVC0 841 aa8.52□□□□□ -1.05
KDM3A-213ENST00000488971 WBP1LQ9NX94 342 aa8.52□□□□□ -1.05
KDM3A-213ENST00000488971 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.52□□□□□ -1.05
KDM3A-213ENST00000488971 ITGBL1O95965 494 aaPredicted RBP8.5□□□□□ -1.05
KDM3A-213ENST00000488971 TSR3Q9UJK0 312 aaKnown RBP8.5□□□□□ -1.05
KDM3A-213ENST00000488971 TSKSQ9UJT2 592 aa8.5□□□□□ -1.05
KDM3A-213ENST00000488971 HPS5Q9UPZ3 1129 aa8.5□□□□□ -1.05
KDM3A-213ENST00000488971 CDCA7LQ96GN5 454 aa8.49□□□□□ -1.05
KDM3A-213ENST00000488971 PRSS12P56730 875 aa8.48□□□□□ -1.05
KDM3A-213ENST00000488971 CERKQ8TCT0 537 aa8.48□□□□□ -1.05
KDM3A-213ENST00000488971 ARIH1Q9Y4X5 557 aaPredicted RBP8.48□□□□□ -1.05
KDM3A-213ENST00000488971 SMAPO00193 183 aa8.47□□□□□ -1.05
KDM3A-213ENST00000488971 KCNC4Q03721 635 aa8.47□□□□□ -1.05
KDM3A-213ENST00000488971 IRX2Q9BZI1 471 aaPredicted RBP8.47□□□□□ -1.05
KDM3A-213ENST00000488971 PRIM1P49642 420 aaKnown RBP8.46□□□□□ -1.06
KDM3A-213ENST00000488971 PPP4CP60510 307 aa8.46□□□□□ -1.06
KDM3A-213ENST00000488971 PNMA3Q9UL41 463 aa8.45□□□□□ -1.06
KDM3A-213ENST00000488971 NBPF26B4DH59 902 aa8.44□□□□□ -1.06
KDM3A-213ENST00000488971 OSBPP22059 807 aa8.43□□□□□ -1.06
KDM3A-213ENST00000488971 SAMD7Q7Z3H4 446 aa8.43□□□□□ -1.06
KDM3A-213ENST00000488971 TATDN2Q93075 761 aa8.43□□□□□ -1.06
KDM3A-213ENST00000488971 CDHR5Q9HBB8 845 aa8.43□□□□□ -1.06
KDM3A-213ENST00000488971 FAM198AQ9UFP1 575 aa8.43□□□□□ -1.06
KDM3A-213ENST00000488971 HDGFP51858 240 aaKnown RBP8.42□□□□□ -1.06
KDM3A-213ENST00000488971 RNF40O75150 1001 aa8.41□□□□□ -1.06
KDM3A-213ENST00000488971 NUDT18Q6ZVK8 323 aa8.4□□□□□ -1.06
KDM3A-213ENST00000488971 C3orf80F5H4A9 247 aa8.39□□□□□ -1.07
KDM3A-213ENST00000488971 RBM27Q9P2N5 1060 aaKnown RBP8.38□□□□□ -1.07
KDM3A-213ENST00000488971 PADI6Q6TGC4 694 aa8.36□□□□□ -1.07
KDM3A-213ENST00000488971 TJAP1Q5JTD0 557 aa8.34□□□□□ -1.07
KDM3A-213ENST00000488971 ARHGEF1Q92888 912 aaKnown RBP8.34□□□□□ -1.07
KDM3A-213ENST00000488971 MTRQ99707 1265 aa8.34□□□□□ -1.07
KDM3A-213ENST00000488971 IL21Q9HBE4 155 aa8.34□□□□□ -1.07
KDM3A-213ENST00000488971 SLC4A3P48751 1232 aa8.33□□□□□ -1.08
KDM3A-213ENST00000488971 SWT1Q5T5J6 900 aaKnown RBP8.32□□□□□ -1.08
KDM3A-213ENST00000488971 NECTIN2Q92692 538 aa8.32□□□□□ -1.08
KDM3A-213ENST00000488971 NPDC1Q9NQX5 325 aaPredicted RBP8.32□□□□□ -1.08
KDM3A-213ENST00000488971 MLLT3P42568 568 aaPredicted RBP8.31□□□□□ -1.08
KDM3A-213ENST00000488971 Q6ZNB5 142 aa8.31□□□□□ -1.08
KDM3A-213ENST00000488971 SLF2Q8IX21 1173 aa8.31□□□□□ -1.08
KDM3A-213ENST00000488971 TTC13Q8NBP0 860 aa8.31□□□□□ -1.08
KDM3A-213ENST00000488971 APLP1P51693 650 aa8.3□□□□□ -1.08
KDM3A-213ENST00000488971 KCNV2Q8TDN2 545 aa8.3□□□□□ -1.08
KDM3A-213ENST00000488971 ZNF516Q92618 1163 aa8.28□□□□□ -1.08
KDM3A-213ENST00000488971 COPS2P61201 443 aa8.27□□□□□ -1.09
KDM3A-213ENST00000488971 PPP1R18Q6NYC8 613 aa8.27□□□□□ -1.09
KDM3A-213ENST00000488971 EYA1Q99502 592 aa8.27□□□□□ -1.09
KDM3A-213ENST00000488971 PRKD2Q9BZL6 878 aa8.27□□□□□ -1.09
KDM3A-213ENST00000488971 NUTM2FA1L443 756 aa8.26□□□□□ -1.09
KDM3A-213ENST00000488971 LAPTM4AQ15012 233 aa8.25□□□□□ -1.09
KDM3A-213ENST00000488971 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.25□□□□□ -1.09
KDM3A-213ENST00000488971 GFRA3O60609 400 aa8.24□□□□□ -1.09
KDM3A-213ENST00000488971 GGCXP38435 758 aa8.24□□□□□ -1.09
KDM3A-213ENST00000488971 PTGDRQ13258 359 aa8.24□□□□□ -1.09
KDM3A-213ENST00000488971 RBM46Q8TBY0 533 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms